RNA5SP41, chr1:13949679-13949779 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs12039802 chr1:13999286 PRDM2 [-27407bp] C - 13 T vs. C - - >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1261014 chr1:13908337 PDPN [-1623bp] C - 13 C vs. G 0.35 (C) 0.317 (G) >1 (-) 0 (-) >0.05
rs1935116 chr1:13945919 PDPN [+1467bp] C - 13 T vs. C 0.217 (T) 0.225 (T) <1 (-) 6 (-) >0.05
rs150459320 chr1:13959396 RNA5SP41 [+9617bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs6702123 chr1:13960977 RNA5SP41 [+11198bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs355025 chr1:13910417 PDPN C - 13 T vs. C 0.317 (T) 0.317 (C) >1 (-) 0 (-) >0.05
rs6703276 chr1:13946199 PDPN [+1747bp] C - 13 A vs. G 0.208 (G) 0.225 (G) >1 (-) 10 (-) >0.05
rs34732498 chr1:13970461 RNA5SP41 [+20682bp] C - 13 T vs. C 0.1 (C) 0.075 (C) <1 (-) 0 (-) >0.05
rs141590326 chr1:13999256 PRDM2 [-27437bp] C - 13 A vs. G - - <1 (-) 5 (-) >0.05
rs113235120 chr1:13999614 PRDM2 [-27079bp] C - 13 A vs. G - - >1 (-) 5 (-) >0.05
rs111871728 chr1:13999619 PRDM2 [-27074bp] C - 13 T vs. C - - >1 (-) 5 (-) >0.05
rs77005299 chr1:13999364 PRDM2 [-27329bp] C - 13 A vs. G 0.025 (G) - >1 (-) 5 (-) >0.05
rs2487628 chr1:13942073 PDPN C - 13 A vs. G - 0.225 (A) <1 (-) 8 (-) >0.05
rs149399097 chr1:13957252 RNA5SP41 [+7473bp] C - 8 A vs. G - - >1 (-) 25 (-) >0.05
rs2495014 chr1:13985591 RNA5SP41 [+35812bp] C - 13 A vs. C 0.025 (A) - >1 (-) 0 (-) >0.05
rs116406995 chr1:13998802 PRDM2 [-27891bp] C - 13 T vs. C 0.017 (C) - >1 (-) 3 (-) >0.05
rs12057447 chr1:13965135 RNA5SP41 [+15356bp] C - 13 T vs. C 0.1 (T) 0.067 (T) >1 (-) 0 (-) >0.05
rs145026374 chr1:13998735 PRDM2 [-27958bp] C - 13 A vs. C - - >1 (-) 3 (-) >0.05
rs17390405 chr1:13949087 RNA5SP41 [-592bp] C - 10 A vs. G 0.058 (A) 0.042 (A) <1 (-) 0 (-) >0.05
rs35656843 chr1:13926782 PDPN C - 13 A vs. G 0.042 (A) 0.042 (A) <1 (-) 0 (-) >0.05
rs2486182 chr1:13989227 PRDM2 [-37466bp] C - 13 T vs. C 0.1 (C) 0.075 (C) <1 (-) 0 (-) >0.05
rs6703700 chr1:13946586 PDPN [+2134bp] C - 13 A vs. G 0.325 (A) 0.383 (A) <1 (-) 0 (-) >0.05
rs99382 chr1:13907413 PDPN [-2547bp] C - 13 A vs. G 0.45 (G) 0.35 (A) <1 (-) 0 (-) >0.05
rs1061610 chr1:13943185 PDPN C - 13 A vs. G 0.05 (A) 0.083 (A) >1 (-) 18 (-) >0.05
rs355019 chr1:13906663 PDPN [-3297bp] C - 13 T vs. C 0.442 (C) 0.458 (T) <1 (-) 0 (-) >0.05
rs12754389 chr1:13984226 RNA5SP41 [+34447bp] C - 13 C vs. G - - >1 (-) 0 (-) >0.05
rs11803252 chr1:13984208 RNA5SP41 [+34429bp] C - 13 T vs. C 0.092 (T) - >1 (-) 0 (-) >0.05
rs2487633 chr1:13979477 RNA5SP41 [+29698bp] C - 13 A vs. G 0.092 (G) 0.075 (G) <1 (-) 0 (-) >0.05
rs2487631 chr1:13977327 RNA5SP41 [+27548bp] C - 13 T vs. G 0.1 (T) 0.042 (T) >1 (-) 0 (-) >0.05
rs2495043 chr1:13996574 PRDM2 [-30119bp] C - 13 A vs. C - - <1 (-) 0 (-) >0.05
rs10803420 chr1:13954853 RNA5SP41 [+5074bp] C - 13 T vs. C 0.367 (T) 0.408 (C) <1 (-) 0 (-) >0.05
rs355016 chr1:13904275 PDPN [-5685bp] C - 13 A vs. G 0.492 (G) 0.35 (A) <1 (-) 0 (-) >0.05
rs2495024 chr1:13988403 PRDM2 [-38290bp] C - 13 T vs. C 0.1 (C) 0.042 (C) <1 (-) 0 (-) >0.05
rs2495022 chr1:13988076 RNA5SP41 [+38297bp] C - 13 T vs. C 0.1 (C) 0.058 (C) <1 (-) 0 (-) >0.05
rs77793475 chr1:13948910 RNA5SP41 [-769bp] C - 4 C vs. G 0.042 (G) 0.008 (G) <1 (-) 0 (-) >0.05
rs11584648 chr1:13939650 PDPN C - 13 A vs. G 0.042 (A) 0.05 (A) >1 (-) 31 (-) >0.05
rs2495029 chr1:13990258 PRDM2 [-36435bp] C - 13 T vs. C 0.1 (C) - <1 (-) 0 (-) >0.05
rs16851999 chr1:13919780 PDPN C - 13 A vs. G 0.175 (A) 0.025 (A) >1 (-) 12 (-) >0.05
rs10927907 chr1:13923574 PDPN C - 13 T vs. C 0.15 (C) 0.075 (C) <1 (-) 0 (-) >0.05
rs17390097 chr1:13923944 PDPN C - 13 A vs. G 0.15 (G) - <1 (-) 0 (-) >0.05
rs2924867 chr1:13901615 PDPN [-8345bp] C - 13 A vs. G 0.483 (A) 0.317 (G) >1 (-) 0 (-) >0.05
rs876931 chr1:13944568 PDPN [+116bp] C - 13 T vs. C 0.383 (C) 0.425 (T) >1 (-) 13 (-) >0.05
rs2486178 chr1:13992069 PRDM2 [-34624bp] C - 12 A vs. G 0.1 (G) 0.05 (G) <1 (-) 0 (-) >0.05
rs680489 chr1:13902429 PDPN [-7531bp] C - 13 A vs. G 0.483 (A) 0.35 (G) >1 (-) 0 (-) >0.05
rs355013 chr1:13903098 PDPN [-6862bp] C - 13 T vs. C 0.483 (C) 0.35 (T) <1 (-) 0 (-) >0.05
rs1261015 chr1:13908031 PDPN [-1929bp] C - 13 A vs. G 0.342 (A) 0.317 (G) >1 (-) 0 (-) >0.05
rs2486177 chr1:13997097 PRDM2 [-29596bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs355014 chr1:13903601 PDPN [-6359bp] C - 13 T vs. C 0.483 (C) 0.325 (T) <1 (-) 0 (-) >0.05
rs2940302 chr1:13901217 PDPN [-8743bp] C - 13 C vs. G - - >1 (-) 0 (-) >0.05
rs148554255 chr1:13997139 PRDM2 [-29554bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs12410048 chr1:13956166 RNA5SP41 [+6387bp] C - 10 C vs. G 0.092 (G) 0.125 (G) >1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.