RNA5SP41, chr1:13949679-13949779 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs12039802 chr1:13999286 PRDM2 [-27407bp] C - 13 T vs. C - - >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs142923096 chr1:13958585 RNA5SP41 [+8806bp] C - 5 T vs. C - - >1 (-) 0 (-) >0.05
rs61777782 chr1:13922400 PDPN C - 13 A vs. G 0.15 (G) - <1 (-) 4 (-) >0.05
rs142386605 chr1:13999153 PRDM2 [-27540bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs143118004 chr1:13999113 PRDM2 [-27580bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs138394326 chr1:13999121 PRDM2 [-27572bp] C - 13 T vs. G - - <1 (-) 0 (-) >0.05
rs12403687 chr1:13901647 PDPN [-8313bp] C - 13 T vs. C 0.142 (T) - >1 (-) 17 (-) >0.05
rs68133711 chr1:13956807 RNA5SP41 [+7028bp] C - 10 A vs. G 0.092 (A) 0.108 (A) <1 (-) 0 (-) >0.05
rs12732247 chr1:13927062 PDPN C - 13 C vs. G - - <1 (-) 0 (-) >0.05
rs76460866 chr1:13997569 PRDM2 [-29124bp] C - 13 A vs. C 0.1 (C) 0.058 (C) <1 (-) 0 (-) >0.05
rs10492979 chr1:13992480 PRDM2 [-34213bp] C - 13 A vs. G 0.1 (G) 0.05 (G) <1 (-) 0 (-) >0.05
rs59835073 chr1:13947024 PDPN [+2572bp] C - 13 T vs. C 0.375 (T) 0.425 (C) <1 (-) 3 (-) >0.05
rs4391657 chr1:13937281 PDPN C - 13 T vs. C 0.217 (T) 0.208 (T) <1 (-) 8 (-) >0.05
rs7514217 chr1:13922799 PDPN C - 13 A vs. G 0.442 (G) 0.292 (A) <1 (-) 0 (-) >0.05
rs4661421 chr1:13964255 RNA5SP41 [+14476bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs72633912 chr1:13939123 PDPN C - 13 A vs. G 0.05 (G) 0.183 (G) <1 (-) 28 (-) >0.05
rs241908 chr1:13904036 PDPN [-5924bp] C - 13 A vs. G 0.467 (G) 0.35 (A) <1 (-) 0 (-) >0.05
rs1539114 chr1:13943528 PDPN C - 13 A vs. C 0.042 (C) 0.167 (C) <1 (-) 19 (-) >0.05
rs947327 chr1:13945292 PDPN [+840bp] C - 13 C vs. G 0.267 (C) 0.392 (C) <1 (-) 0 (-) >0.05
rs67913176 chr1:13941631 PDPN C - 13 A vs. G 0.058 (A) 0.158 (A) >1 (-) 26 (-) >0.05
rs12404716 chr1:13901884 PDPN [-8076bp] C - 13 T vs. C 0.15 (C) 0.067 (C) <1 (-) 18 (-) >0.05
rs12404725 chr1:13901988 PDPN [-7972bp] C - 13 T vs. C 0.15 (C) 0.067 (C) <1 (-) 18 (-) >0.05
rs76341522 chr1:13906829 PDPN [-3131bp] C - 10 A vs. G - 0.033 (G) >1 (-) 0 (-) >0.05
rs11586786 chr1:13938778 PDPN C - 13 T vs. C 0.058 (C) 0.183 (C) <1 (-) 26 (-) >0.05
rs12566684 chr1:13922117 PDPN C - 13 A vs. G 0.058 (G) 0.242 (G) >1 (-) 0 (-) >0.05
rs61777779 chr1:13915681 PDPN C - 13 T vs. G 0.15 (G) - <1 (-) 6 (-) >0.05
rs355022 chr1:13908690 PDPN [-1270bp] C - 12 T vs. C 0.35 (T) 0.317 (C) >1 (-) 0 (-) >0.05
rs11588651 chr1:13947905 RNA5SP41 [-1774bp] C - 13 A vs. G 0.05 (G) 0.125 (G) <1 (-) 7 (-) >0.05
rs2275385 chr1:13940011 PDPN C - 13 A vs. G 0.05 (A) 0.183 (A) >1 (-) 28 (-) >0.05
rs1772641 chr1:13939428 PDPN C - 13 A vs. G 0.258 (A) 0.408 (A) <1 (-) 0 (-) >0.05
rs3845612 chr1:13916002 PDPN C - 13 A vs. G 0.15 (A) - >1 (-) 7 (-) >0.05
rs140621879 chr1:13984661 RNA5SP41 [+34882bp] C - 10 T vs. C - - >1 (-) 0 (-) >0.05
rs11587701 chr1:13946497 PDPN [+2045bp] C - 13 A vs. G 0.05 (G) 0.192 (G) <1 (-) 16 (-) >0.05
rs2487647 chr1:13937899 PDPN C - 13 A vs. G 0.292 (A) 0.408 (A) <1 (-) 0 (-) >0.05
rs12023789 chr1:13904954 PDPN [-5006bp] C - 3 A vs. G - - <1 (-) 0 (-) >0.05
rs1767681 chr1:13940014 PDPN C - 13 T vs. C 0.283 (C) 0.408 (C) >1 (-) 0 (-) >0.05
rs399869 chr1:13935174 PDPN C - 13 A vs. C 0.3 (C) 0.408 (C) >1 (-) 0 (-) >0.05
rs4328068 chr1:13970282 RNA5SP41 [+20503bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs2483135 chr1:13940473 PDPN C - 13 A vs. G 0.292 (G) 0.408 (G) >1 (-) 0 (-) >0.05
rs4661916 chr1:13957125 RNA5SP41 [+7346bp] C - 4 A vs. C - - >1 (-) 0 (-) >0.05
rs1272827 chr1:13915560 PDPN C - 13 T vs. C 0.075 (T) 0.492 (T) <1 (-) 0 (-) >0.05
rs2487643 chr1:13937089 PDPN C - 13 T vs. G 0.292 (G) 0.458 (G) >1 (-) 0 (-) >0.05
rs2495065 chr1:13982728 RNA5SP41 [+32949bp] C - 13 A vs. G 0.008 (G) - >1 (-) 13 (-) >0.05
rs2495066 chr1:13982716 RNA5SP41 [+32937bp] C - 13 T vs. C 0.008 (T) - <1 (-) 13 (-) >0.05
rs139449949 chr1:13981283 RNA5SP41 [+31504bp] C - 13 T vs. C - - >1 (-) 13 (-) >0.05
rs149952398 chr1:13998278 PRDM2 [-28415bp] C - 9 T vs. C - - >1 (-) 0 (-) >0.05
rs92406 chr1:13935402 PDPN C - 13 A vs. C 0.275 (C) 0.408 (C) >1 (-) 0 (-) >0.05
rs404658 chr1:13936822 PDPN C - 13 T vs. G 0.292 (G) 0.408 (G) >1 (-) 0 (-) >0.05
rs78875802 chr1:13928213 PDPN C - 4 A vs. G - 0.042 (G) <1 (-) 0 (-) >0.05
rs1261025 chr1:13920193 PDPN C - 13 A vs. G 0.3 (G) 0.317 (A) <1 (-) 0 (-) >0.05
rs2495037 chr1:13992846 PRDM2 [-33847bp] C - 13 A vs. G 0.1 (G) 0.283 (G) <1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.