RNA5SP41, chr1:13949679-13949779 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs12039802 chr1:13999286 PRDM2 [-27407bp] C - 13 T vs. C - - >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3845611 chr1:13906978 PDPN [-2982bp] C - 13 T vs. G 0.142 (G) - <1 (-) 10 (-) >0.05
rs2885134 chr1:13921934 PDPN C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs143154928 chr1:13921447 PDPN C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs114853943 chr1:13997512 PRDM2 [-29181bp] C - 13 C vs. G 0.008 (C) - <1 (-) 12 (-) >0.05
rs138362218 chr1:13996258 PRDM2 [-30435bp] C - 13 A vs. G - - <1 (-) 11 (-) >0.05
rs116756003 chr1:13997067 PRDM2 [-29626bp] C - 13 A vs. G 0.017 (A) 0.025 (A) <1 (-) 11 (-) >0.05
rs355020 chr1:13907484 PDPN [-2476bp] C - 13 A vs. G 0.083 (A) 0.492 (G) <1 (-) 0 (-) >0.05
rs12409563 chr1:13948263 RNA5SP41 [-1416bp] C - 7 A vs. G 0.142 (G) 0.142 (G) <1 (-) 0 (-) >0.05
rs12138888 chr1:13945949 PDPN [+1497bp] C - 11 A vs. G - 0.05 (G) >1 (-) 17 (-) >0.05
rs1148454 chr1:13911393 PDPN C - 13 T vs. C 0.083 (T) 0.483 (T) <1 (-) 0 (-) >0.05
rs115467504 chr1:13993918 PRDM2 [-32775bp] C - 13 A vs. G 0.008 (G) - >1 (-) 9 (-) >0.05
rs10927910 chr1:13948765 RNA5SP41 [-914bp] C - 3 A vs. G 0.025 (A) 0.183 (A) >1 (-) 0 (-) >0.05
rs115768035 chr1:13950866 RNA5SP41 [+1087bp] C - 10 C vs. G 0.008 (G) - <1 (-) 0 (-) >0.05
rs355017 chr1:13904887 PDPN [-5073bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs118016347 chr1:13992739 PRDM2 [-33954bp] C - 13 A vs. G - 0.017 (A) <1 (-) 9 (-) >0.05
rs12076662 chr1:13994228 PRDM2 [-32465bp] C - 13 T vs. C - 0.017 (T) <1 (-) 10 (-) >0.05
rs115217892 chr1:13993307 PRDM2 [-33386bp] C - 13 A vs. G 0.008 (A) - <1 (-) 9 (-) >0.05
rs1412839 chr1:13938511 PDPN C - 13 A vs. C 0.275 (A) 0.408 (A) <1 (-) 0 (-) >0.05
rs116897306 chr1:13943478 PDPN C - 10 A vs. T - 0.017 (T) >1 (-) 18 (-) >0.05
rs1261026 chr1:13920807 PDPN C - 13 T vs. G 0.308 (T) 0.317 (G) >1 (-) 0 (-) >0.05
rs7550427 chr1:13995280 PRDM2 [-31413bp] C - 13 A vs. G 0.008 (G) 0.025 (G) >1 (-) 12 (-) >0.05
rs142483859 chr1:13979127 RNA5SP41 [+29348bp] C - 13 T vs. C - - <1 (-) 8 (-) >0.05
rs149672241 chr1:13979342 RNA5SP41 [+29563bp] C - 13 T vs. C - - <1 (-) 8 (-) >0.05
rs355029 chr1:13913439 PDPN C - 10 T vs. C - - >1 (-) 0 (-) >0.05
rs79290973 chr1:13968020 RNA5SP41 [+18241bp] C - 7 A vs. C 0.017 (C) - >1 (-) 0 (-) >0.05
rs355031 chr1:13914622 PDPN C - 10 C vs. G - 0.017 (G) >1 (-) 0 (-) >0.05
rs1261024 chr1:13919337 PDPN C - 13 A vs. G 0.058 (A) 0.242 (A) <1 (-) 0 (-) >0.05
rs11804743 chr1:13917411 PDPN C - 13 T vs. C 0.1 (T) 0.083 (T) <1 (-) 0 (-) >0.05
rs1772635 chr1:13948225 RNA5SP41 [-1454bp] C - 13 A vs. C 0.267 (C) 0.267 (C) <1 (-) 9 (-) >0.05
rs12561812 chr1:13973250 RNA5SP41 [+23471bp] C - 7 T vs. G 0.033 (T) 0.15 (T) <1 (-) 0 (-) >0.05
rs76964261 chr1:13997417 PRDM2 [-29276bp] C - 13 A vs. G 0.1 (A) 0.242 (A) >1 (-) 0 (-) >0.05
rs116130579 chr1:13973144 RNA5SP41 [+23365bp] C - 13 A vs. G 0.017 (A) - <1 (-) 8 (-) >0.05
rs655839 chr1:13900468 PDPN [-9492bp] C - 13 A vs. T 0.35 (T) 0.425 (A) <1 (-) 0 (-) >0.05
rs10927905 chr1:13916997 PDPN C - 13 T vs. C 0.067 (C) 0.4 (T) >1 (-) 0 (-) >0.05
rs79054472 chr1:13995655 PRDM2 [-31038bp] C - 13 T vs. C - - <1 (-) 6 (-) >0.05
rs12031781 chr1:13910152 PDPN C - 13 T vs. C 0.142 (T) - >1 (-) 0 (-) >0.05
rs41269209 chr1:13936839 PDPN C - 11 A vs. G - - <1 (-) 17 (-) >0.05
rs115852950 chr1:13990713 PRDM2 [-35980bp] C - 13 A vs. G - - >1 (-) 1 (-) >0.05
rs114942088 chr1:13961437 RNA5SP41 [+11658bp] C - 10 A vs. C 0.017 (C) - >1 (-) 0 (-) >0.05
rs2940303 chr1:13901298 PDPN [-8662bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs56754754 chr1:13908554 PDPN [-1406bp] C - 13 A vs. T 0.15 (A) - >1 (-) 0 (-) >0.05
rs57902064 chr1:13901106 PDPN [-8854bp] C - 4 A vs. T - - <1 (-) 0 (-) >0.05
rs114079997 chr1:13936239 PDPN C - 11 A vs. G 0.017 (G) - >1 (-) 17 (-) >0.05
rs139625446 chr1:13935573 PDPN C - 11 T vs. C - - >1 (-) 17 (-) >0.05
rs76668251 chr1:13939197 PDPN C - 11 A vs. C - 0.05 (A) <1 (-) 17 (-) >0.05
rs74056403 chr1:13950070 RNA5SP41 [+291bp] C - 10 A vs. G 0.025 (G) 0.025 (G) <1 (-) 0 (-) >0.05
rs16852432 chr1:13949831 RNA5SP41 [+52bp] C - 10 A vs. G 0.025 (G) 0.025 (G) <1 (-) 0 (-) >0.05
rs140454319 chr1:13997848 PRDM2 [-28845bp] C - 13 T vs. C - - <1 (-) 10 (-) >0.05
rs2275384 chr1:13940560 PDPN C - 11 A vs. C 0.017 (C) 0.05 (C) >1 (-) 16 (-) >0.05
rs117634338 chr1:13943470 PDPN C - 11 A vs. G - 0.05 (A) <1 (-) 14 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.