RNU4ATAC4P, chr1:67733284-67733409 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs115917484 chr1:67707321 IL23R C - 10 A vs. G 0.042 (G) - <1 (-) 7 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs59033475 chr1:67706601 IL23R C - 13 T vs. C 0.142 (C) 0.225 (C) >1 (-) 27 (-) >0.05
rs7548827 chr1:67770730 IL12RB2 [-2317bp] C - 12 T vs. C 0.408 (T) 0.225 (T) <1 (-) 0 (-) >0.05
rs11209045 chr1:67770799 IL12RB2 [-2248bp] C - 12 A vs. G 0.4 (G) 0.225 (G) >1 (-) 0 (-) >0.05
rs112949081 chr1:67700439 IL23R C - 13 T vs. G - - >1 (-) 50 (-) >0.05
rs11465810 chr1:67703185 IL23R C - 13 A vs. C 0.292 (C) 0.083 (C) <1 (-) 50 (-) >0.05
rs17129717 chr1:67771181 IL12RB2 [-1866bp] C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs56334818 chr1:67713747 IL23R C - 13 A vs. G 0.283 (G) 0.067 (G) <1 (-) 51 (-) >0.05
rs7544381 chr1:67774293 IL12RB2 C - 13 T vs. C 0.408 (T) 0.175 (T) <1 (-) 0 (-) >0.05
rs56996373 chr1:67692810 C1orf141 C - 13 A vs. C 0.15 (A) 0.158 (A) <1 (-) 24 (-) >0.05
rs6673605 chr1:67776280 IL12RB2 C - 13 A vs. G 0.433 (G) 0.183 (G) >1 (-) 0 (-) >0.05
rs55954915 chr1:67708942 IL23R C - 13 A vs. C 0.275 (A) 0.067 (A) >1 (-) 52 (-) >0.05
rs41313260 chr1:67706309 IL23R C - 13 T vs. C 0.283 (T) 0.083 (T) >1 (-) 51 (-) >0.05
rs6682033 chr1:67708670 IL23R C - 13 A vs. G 0.275 (G) 0.083 (G) <1 (-) 51 (-) >0.05
rs113001212 chr1:67689903 C1orf141 C - 10 C vs. G 0.008 (C) - >1 (-) 0 (-) >0.05
rs56187736 chr1:67772344 IL12RB2 [-703bp] C - 12 C vs. G 0.225 (G) - >1 (-) 0 (-) >0.05
rs115726892 chr1:67753753 IL12RB2 [-19294bp] C - 13 A vs. G 0.025 (G) - <1 (-) 0 (-) >0.05
rs72678518 chr1:67771397 IL12RB2 [-1650bp] C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) >0.05
rs56669261 chr1:67697737 IL23R C - 13 A vs. G 0.142 (G) 0.192 (G) >1 (-) 24 (-) >0.05
rs6670734 chr1:67775783 IL12RB2 C - 13 A vs. C - - >1 (-) 0 (-) >0.05
rs7548656 chr1:67770537 IL12RB2 [-2510bp] C - 12 T vs. C 0.242 (T) - <1 (-) 0 (-) >0.05
rs114101090 chr1:67735766 RNU4ATAC4P [+2357bp] C - 4 A vs. G 0.008 (A) - <1 (-) 0 (-) >0.05
rs4655533 chr1:67752701 RNU4ATAC4P [+19292bp] C - 12 A vs. G 0.025 (A) - <1 (-) 19 (-) >0.05
rs75378030 chr1:67747254 RNU4ATAC4P [+13845bp] C - 11 A vs. G - - >1 (-) 22 (-) >0.05
rs11465802 chr1:67685598 C1orf141 C - 13 A vs. C 0.275 (C) 0.317 (A) <1 (-) 0 (-) >0.05
rs6677168 chr1:67749543 RNU4ATAC4P [+16134bp] C - 13 T vs. C - - <1 (-) 44 (-) >0.05
rs72676085 chr1:67683571 C1orf141 C - 13 A vs. G 0.108 (A) - <1 (-) 0 (-) >0.05
rs10889676 chr1:67722567 IL23R C - 12 A vs. C 0.283 (A) 0.317 (C) >1 (-) 0 (-) >0.05
rs13374896 chr1:67769682 IL12RB2 [-3365bp] C - 12 T vs. C 0.25 (C) 0.042 (C) >1 (-) 0 (-) >0.05
rs7553336 chr1:67695044 C1orf141 C - 13 A vs. G 0.275 (G) 0.083 (G) <1 (-) 50 (-) >0.05
rs2001257 chr1:67777590 IL12RB2 C - 13 C vs. G 0.017 (G) 0.05 (G) <1 (-) 41 (-) >0.05
rs56299031 chr1:67693235 C1orf141 C - 13 T vs. C 0.275 (T) 0.092 (T) >1 (-) 50 (-) >0.05
rs112401754 chr1:67778645 IL12RB2 C - 13 T vs. G 0.033 (T) 0.05 (T) >1 (-) 52 (-) >0.05
rs79528943 chr1:67778065 IL12RB2 C - 13 T vs. C 0.033 (C) - <1 (-) 52 (-) >0.05
rs2030071 chr1:67778924 IL12RB2 C - 13 A vs. G 0.033 (A) 0.05 (A) >1 (-) 52 (-) >0.05
rs140719178 chr1:67750863 RNU4ATAC4P [+17454bp] C - 12 T vs. C - - >1 (-) 18 (-) >0.05
rs78134424 chr1:67696175 C1orf141 C - 13 T vs. C 0.017 (T) - <1 (-) 14 (-) >0.05
rs147138671 chr1:67701588 IL23R C - 3 T vs. G - - >1 (-) 0 (-) >0.05
rs61781415 chr1:67732602 RNU4ATAC4P [-682bp] C - 13 T vs. C 0.092 (T) 0.258 (T) <1 (-) 28 (-) >0.05
rs41396545 chr1:67689608 C1orf141 C - 13 A vs. G 0.325 (G) 0.083 (G) <1 (-) 49 (-) >0.05
rs11581332 chr1:67747195 RNU4ATAC4P [+13786bp] C - 13 C vs. G 0.092 (G) - >1 (-) 19 (-) >0.05
rs61781387 chr1:67690755 C1orf141 C - 13 A vs. G 0.275 (A) 0.083 (A) >1 (-) 50 (-) >0.05
rs17129740 chr1:67774689 IL12RB2 C - 13 T vs. C - - >1 (-) 53 (-) >0.05
rs11576006 chr1:67772013 IL12RB2 [-1034bp] C - 12 T vs. C 0.225 (C) - >1 (-) 0 (-) >0.05
rs75025649 chr1:67776922 IL12RB2 C - 13 A vs. G 0.033 (A) 0.05 (A) >1 (-) 52 (-) >0.05
rs17129741 chr1:67775051 IL12RB2 C - 13 A vs. T 0.033 (T) 0.033 (T) <1 (-) 53 (-) >0.05
rs112496926 chr1:67776609 IL12RB2 C - 13 A vs. T - - >1 (-) 52 (-) >0.05
rs78248396 chr1:67739323 RNU4ATAC4P [+5914bp] C - 13 T vs. C 0.025 (T) - >1 (-) 0 (-) >0.05
rs11209042 chr1:67766926 IL12RB2 [-6121bp] C - 13 A vs. C 0.292 (C) 0.475 (C) <1 (-) 8 (-) >0.05
rs17129719 chr1:67771243 IL12RB2 [-1804bp] C - 12 A vs. C - - <1 (-) 0 (-) >0.05
rs72931012 chr1:67764815 IL12RB2 [-8232bp] C - 13 T vs. C - - >1 (-) 43 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.