RNU4ATAC4P, chr1:67733284-67733409 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs115917484 chr1:67707321 IL23R C - 10 A vs. G 0.042 (G) - <1 (-) 7 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs4655692 chr1:67691665 C1orf141 C - 13 A vs. G 0.233 (A) 0.042 (A) <1 (-) 0 (-) >0.05
rs12568134 chr1:67737995 RNU4ATAC4P [+4586bp] C - 13 T vs. C 0.1 (C) 0.233 (C) >1 (-) 30 (-) >0.05
rs10789231 chr1:67774663 IL12RB2 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs60041079 chr1:67697219 C1orf141 C - 13 C vs. G 0.283 (G) 0.083 (G) <1 (-) 48 (-) >0.05
rs7528924 chr1:67689036 C1orf141 C - 13 A vs. G 0.225 (G) 0.042 (G) >1 (-) 0 (-) >0.05
rs72929019 chr1:67695383 C1orf141 C - 13 A vs. G 0.192 (G) 0.192 (G) >1 (-) 0 (-) >0.05
rs12568764 chr1:67740835 RNU4ATAC4P [+7426bp] C - 13 T vs. G 0.1 (G) 0.267 (G) >1 (-) 31 (-) >0.05
rs1845783 chr1:67756865 IL12RB2 [-16182bp] C - 13 A vs. G 0.1 (G) 0.225 (G) >1 (-) 32 (-) >0.05
rs12406837 chr1:67688577 C1orf141 C - 13 C vs. G 0.2 (G) 0.192 (G) >1 (-) 0 (-) >0.05
rs4655532 chr1:67741256 RNU4ATAC4P [+7847bp] C - 13 A vs. C - - <1 (-) 31 (-) >0.05
rs11586253 chr1:67691863 C1orf141 C - 13 T vs. C 0.208 (T) 0.175 (T) <1 (-) 0 (-) >0.05
rs61781419 chr1:67751615 RNU4ATAC4P [+18206bp] C - 13 A vs. G 0.1 (A) 0.258 (A) <1 (-) 32 (-) >0.05
rs115596588 chr1:67777712 IL12RB2 C - 6 A vs. G 0.008 (G) - <1 (-) 0 (-) >0.05
rs2902441 chr1:67752175 RNU4ATAC4P [+18766bp] C - 13 T vs. C 0.1 (T) 0.267 (T) <1 (-) 32 (-) >0.05
rs4655534 chr1:67752734 RNU4ATAC4P [+19325bp] C - 13 A vs. G 0.1 (G) 0.267 (G) >1 (-) 32 (-) >0.05
rs1995026 chr1:67754096 IL12RB2 [-18951bp] C - 13 C vs. G 0.1 (G) 0.258 (G) >1 (-) 32 (-) >0.05
rs12407551 chr1:67778823 IL12RB2 C - 13 A vs. T 0.017 (T) - <1 (-) 0 (-) >0.05
chr1:67727124 chr1:67727124 IL23R [+1462bp] C - 4 A vs. C - - <1 (-) 0 (-) >0.05
rs61779784 chr1:67757890 IL12RB2 [-15157bp] C - 13 A vs. G 0.083 (G) - >1 (-) 32 (-) >0.05
rs68071269 chr1:67769114 IL12RB2 [-3933bp] C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs149714317 chr1:67736855 RNU4ATAC4P [+3446bp] C - 3 A vs. T - - <1 (-) 0 (-) >0.05
rs72676087 chr1:67686768 C1orf141 C - 13 T vs. C 0.092 (T) - <1 (-) 0 (-) >0.05
rs79753093 chr1:67758680 IL12RB2 [-14367bp] C - 13 C vs. G 0.1 (C) 0.233 (C) <1 (-) 33 (-) >0.05
rs72678504 chr1:67729728 RNU4ATAC4P [-3556bp] C - 13 T vs. C 0.092 (C) - >1 (-) 0 (-) >0.05
rs72676093 chr1:67707631 IL23R C - 13 T vs. G 0.092 (G) - >1 (-) 0 (-) >0.05
rs12063118 chr1:67685865 C1orf141 C - 13 A vs. G 0.092 (A) - <1 (-) 0 (-) >0.05
rs12085634 chr1:67718713 IL23R C - 13 A vs. T 0.067 (A) - <1 (-) 0 (-) >0.05
rs111760419 chr1:67693748 C1orf141 C - 13 C vs. G - - >1 (-) 0 (-) >0.05
rs72678503 chr1:67728459 IL23R [+2797bp] C - 13 C vs. G 0.092 (G) - >1 (-) 0 (-) >0.05
rs76892752 chr1:67707382 IL23R C - 13 T vs. G 0.092 (T) - <1 (-) 0 (-) >0.05
rs11488272 chr1:67716732 IL23R C - 13 T vs. C 0.083 (C) - >1 (-) 0 (-) >0.05
rs12410535 chr1:67774595 IL12RB2 C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs2201841 chr1:67694202 C1orf141 C - 13 A vs. G 0.292 (G) 0.317 (A) <1 (-) 0 (-) >0.05
rs34223023 chr1:67765301 IL12RB2 [-7746bp] C - 13 A vs. G 0.1 (G) 0.233 (G) >1 (-) 33 (-) >0.05
rs10889673 chr1:67713257 IL23R C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs12567279 chr1:67763569 IL12RB2 [-9478bp] C - 13 T vs. C 0.1 (T) 0.217 (T) <1 (-) 35 (-) >0.05
rs35315869 chr1:67730753 RNU4ATAC4P [-2531bp] C - 13 T vs. C 0.25 (T) 0.208 (T) <1 (-) 7 (-) >0.05
rs2180294 chr1:67709141 IL23R C - 13 C vs. G - - <1 (-) 0 (-) >0.05
rs12070470 chr1:67697271 C1orf141 C - 13 T vs. C 0.092 (C) - >1 (-) 0 (-) >0.05
rs11465803 chr1:67702141 IL23R C - 13 T vs. C 0.092 (T) - <1 (-) 0 (-) >0.05
rs12030107 chr1:67695398 C1orf141 C - 13 T vs. G 0.292 (T) 0.317 (G) >1 (-) 0 (-) >0.05
rs138250234 chr1:67700544 IL23R C - 5 C vs. G - - <1 (-) 0 (-) >0.05
rs4655694 chr1:67723552 IL23R C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs35097792 chr1:67760291 IL12RB2 [-12756bp] C - 13 A vs. G 0.1 (G) 0.225 (G) >1 (-) 34 (-) >0.05
rs12030948 chr1:67701765 IL23R C - 13 T vs. G 0.342 (T) 0.317 (G) >1 (-) 0 (-) >0.05
rs12751814 chr1:67704863 IL23R C - 13 A vs. G 0.425 (G) 0.125 (G) <1 (-) 35 (-) >0.05
rs76253605 chr1:67732853 RNU4ATAC4P [-431bp] C - 13 A vs. G 0.083 (A) - >1 (-) 15 (-) >0.05
rs10889677 chr1:67725120 IL23R C - 13 A vs. C 0.283 (A) 0.317 (C) >1 (-) 0 (-) >0.05
rs12031203 chr1:67696547 C1orf141 C - 13 A vs. G 0.292 (A) 0.342 (G) >1 (-) 0 (-) >0.05
rs1343152 chr1:67704332 IL23R C - 13 A vs. C 0.325 (C) 0.317 (A) <1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.