RNU4ATAC4P, chr1:67733284-67733409 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs115917484 chr1:67707321 IL23R C - 10 A vs. G 0.042 (G) - <1 (-) 7 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs10489628 chr1:67704107 IL23R C - 13 A vs. G 0.433 (A) 0.275 (A) >1 (-) 0 (-) >0.05
rs11465804 chr1:67702526 IL23R C - 13 T vs. G 0.058 (G) - <1 (-) 0 (-) >0.05
rs7546245 chr1:67750474 RNU4ATAC4P [+17065bp] C - 13 T vs. C 0.3 (C) 0.5 (C) <1 (-) 0 (-) >0.05
rs2017314 chr1:67748140 RNU4ATAC4P [+14731bp] C - 13 A vs. C 0.442 (A) 0.475 (C) >1 (-) 14 (-) >0.05
rs79755370 chr1:67699915 IL23R C - 13 A vs. C 0.05 (A) - >1 (-) 0 (-) >0.05
rs78691454 chr1:67725207 IL23R C - 7 T vs. C 0.033 (T) - >1 (-) 0 (-) >0.05
rs77319898 chr1:67695379 C1orf141 C - 13 C vs. G 0.042 (C) - >1 (-) 0 (-) >0.05
rs6698141 chr1:67741314 RNU4ATAC4P [+7905bp] C - 13 C vs. G 0.308 (C) 0.483 (C) >1 (-) 0 (-) >0.05
rs75328060 chr1:67697069 C1orf141 C - 13 A vs. G 0.05 (G) - <1 (-) 0 (-) >0.05
rs3762316 chr1:67772023 IL12RB2 [-1024bp] C - 13 A vs. G 0.15 (G) 0.183 (G) >1 (-) 38 (-) >0.05
rs75920049 chr1:67723316 IL23R C - 9 A vs. G - - <1 (-) 36 (-) >0.05
rs111379368 chr1:67735360 RNU4ATAC4P [+1951bp] C - 13 T vs. G 0.05 (G) - >1 (-) 0 (-) >0.05
rs3762315 chr1:67772011 IL12RB2 [-1036bp] C - 13 A vs. G 0.15 (G) 0.2 (G) >1 (-) 40 (-) >0.05
rs12141431 chr1:67747023 RNU4ATAC4P [+13614bp] C - 13 C vs. G 0.292 (C) 0.492 (C) >1 (-) 0 (-) >0.05
rs1532502 chr1:67737650 RNU4ATAC4P [+4241bp] C - 13 A vs. G 0.3 (A) 0.467 (A) >1 (-) 0 (-) >0.05
rs12141575 chr1:67747436 RNU4ATAC4P [+14027bp] C - 13 A vs. G 0.308 (A) 0.492 (A) >1 (-) 0 (-) >0.05
rs12033764 chr1:67734482 RNU4ATAC4P [+1073bp] C - 13 T vs. C 0.3 (T) 0.492 (T) >1 (-) 0 (-) >0.05
rs12119179 chr1:67747415 RNU4ATAC4P [+14006bp] C - 13 A vs. C 0.308 (C) 0.492 (C) <1 (-) 0 (-) >0.05
rs11209040 chr1:67752671 RNU4ATAC4P [+19262bp] C - 13 A vs. G 0.308 (A) 0.492 (A) >1 (-) 0 (-) >0.05
rs6660226 chr1:67744601 RNU4ATAC4P [+11192bp] C - 13 A vs. G 0.458 (A) 0.217 (A) >1 (-) 1 (-) >0.05
rs6676660 chr1:67745895 RNU4ATAC4P [+12486bp] C - 13 A vs. T 0.308 (A) 0.483 (A) >1 (-) 0 (-) >0.05
rs76346094 chr1:67695329 C1orf141 C - 10 A vs. G - - >1 (-) 1 (-) >0.05
rs6677508 chr1:67742685 RNU4ATAC4P [+9276bp] C - 13 A vs. C - - <1 (-) 27 (-) >0.05
rs2863209 chr1:67733346 RNU4ATAC4P C - 13 A vs. G 0.133 (G) 0.033 (G) <1 (-) 9 (-) >0.05
rs72931025 chr1:67770361 IL12RB2 [-2686bp] C - 11 T vs. C - 0.042 (C) >1 (-) 0 (-) >0.05
rs71639474 chr1:67745398 RNU4ATAC4P [+11989bp] C - 13 T vs. C - - <1 (-) 14 (-) >0.05
rs2101982 chr1:67732030 RNU4ATAC4P [-1254bp] C - 13 T vs. C 0.15 (T) 0.042 (T) >1 (-) 9 (-) >0.05
rs7547569 chr1:67731368 RNU4ATAC4P [-1916bp] C - 13 T vs. C 0.058 (C) - <1 (-) 0 (-) >0.05
rs139662115 chr1:67725935 IL23R [+273bp] C - 8 C vs. G - - <1 (-) 4 (-) >0.05
rs6665569 chr1:67742121 RNU4ATAC4P [+8712bp] C - 13 T vs. C - - >1 (-) 8 (-) >0.05
rs149798029 chr1:67741884 RNU4ATAC4P [+8475bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs11209036 chr1:67749068 RNU4ATAC4P [+15659bp] C - 13 T vs. C 0.45 (T) 0.208 (T) >1 (-) 6 (-) >0.05
rs11209033 chr1:67744500 RNU4ATAC4P [+11091bp] C - 13 C vs. G 0.308 (G) 0.483 (G) <1 (-) 0 (-) >0.05
rs140184639 chr1:67757483 IL12RB2 [-15564bp] C - 11 T vs. C - - <1 (-) 0 (-) >0.05
rs78488866 chr1:67719783 IL23R C - 9 A vs. G - - >1 (-) 14 (-) >0.05
rs79866453 chr1:67732512 RNU4ATAC4P [-772bp] C - 13 T vs. C 0.058 (T) - >1 (-) 0 (-) >0.05
rs1909129 chr1:67735299 RNU4ATAC4P [+1890bp] C - 13 A vs. G 0.308 (G) 0.483 (A) <1 (-) 0 (-) >0.05
rs10159178 chr1:67734398 RNU4ATAC4P [+989bp] C - 13 T vs. C 0.133 (C) 0.042 (C) <1 (-) 11 (-) >0.05
rs4655536 chr1:67757854 IL12RB2 [-15193bp] C - 13 A vs. T - - <1 (-) 14 (-) >0.05
rs113155999 chr1:67743552 RNU4ATAC4P [+10143bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs11209032 chr1:67740092 RNU4ATAC4P [+6683bp] C - 13 A vs. G 0.308 (A) 0.467 (A) >1 (-) 0 (-) >0.05
rs11209039 chr1:67751193 RNU4ATAC4P [+17784bp] C - 13 A vs. G 0.458 (G) 0.208 (G) <1 (-) 7 (-) >0.05
rs151278615 chr1:67742670 RNU4ATAC4P [+9261bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs144434064 chr1:67741782 RNU4ATAC4P [+8373bp] C - 13 C vs. G - - <1 (-) 0 (-) >0.05
rs17129749 chr1:67779751 IL12RB2 C - 13 T vs. C 0.175 (T) - >1 (-) 6 (-) >0.05
rs11209023 chr1:67685948 C1orf141 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs11583760 chr1:67735948 RNU4ATAC4P [+2539bp] C - 13 T vs. C 0.058 (T) - >1 (-) 0 (-) >0.05
rs34426521 chr1:67745768 RNU4ATAC4P [+12359bp] C - 13 A vs. G 0.308 (G) 0.483 (G) <1 (-) 0 (-) >0.05
rs6701625 chr1:67777407 IL12RB2 C - 13 T vs. C 0.175 (T) - >1 (-) 7 (-) >0.05
rs7523955 chr1:67692132 C1orf141 C - 13 C vs. G 0.483 (C) 0.267 (C) >1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.