SF3A2, chr19:2236520-2248678 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs117022814 chr19:2209647 DOT1L All: C 96,015 12 T vs. C 0.033 (T) - 1.32 (1.18-1.48) 28 (0-64) 2.00e-06
Meta_image?name=rs117022814

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11667219 chr19:2277988 C19orf35 C - 11 A vs. G - - >1 (-) 16 (-) >0.05
rs76904602 chr19:2202330 DOT1L C - 11 T vs. C - 0.092 (T) <1 (-) 10 (-) >0.05
rs8101137 chr19:2297369 LINGO3 C - 11 T vs. C - - >1 (-) 9 (-) >0.05
rs11879876 chr19:2295629 LINGO3 C - 11 T vs. G - - >1 (-) 3 (-) >0.05
rs118079536 chr19:2202252 DOT1L C - 12 T vs. C 0.033 (T) - >1 (-) 34 (-) >0.05
rs74788173 chr19:2287530 LINGO3 [-2244bp] C - 11 A vs. T 0.117 (A) 0.1 (A) >1 (-) 0 (-) >0.05
rs7258841 chr19:2290499 LINGO3 C - 11 T vs. C 0.1 (T) 0.342 (T) >1 (-) 0 (-) >0.05
rs45486197 chr19:2244849 SF3A2 C - 10 A vs. G 0.058 (A) - >1 (-) 8 (-) >0.05
rs45502694 chr19:2244623 SF3A2 C - 10 T vs. G 0.058 (G) - <1 (-) 0 (-) >0.05
rs62119707 chr19:2296837 LINGO3 C - 11 T vs. C - - <1 (-) 14 (-) >0.05
rs2523178 chr19:2275079 C19orf35 C - 11 A vs. G 0.317 (A) 0.108 (A) >1 (-) 17 (-) >0.05
rs11084929 chr19:2294552 LINGO3 C - 11 T vs. G 0.108 (T) 0.108 (T) >1 (-) 0 (-) >0.05
rs3764603 chr19:2288338 LINGO3 [-1436bp] C - 11 A vs. T 0.117 (T) 0.108 (T) <1 (-) 0 (-) >0.05
rs7253353 chr19:2287000 LINGO3 [-2774bp] C - 11 A vs. T 0.117 (T) 0.117 (T) <1 (-) 0 (-) >0.05
rs147402089 chr19:2204102 DOT1L C - 7 A vs. G - - >1 (-) 21 (-) >0.05
rs72985477 chr19:2212881 DOT1L C - 11 A vs. G 0.008 (A) - >1 (-) 0 (-) >0.05
rs28432934 chr19:2292134 LINGO3 C - 11 A vs. C 0.2 (C) 0.442 (A) <1 (-) 0 (-) >0.05
rs56054943 chr19:2279190 C19orf35 C - 11 A vs. G 0.383 (G) 0.358 (A) <1 (-) 0 (-) >0.05
rs146069600 chr19:2240060 SF3A2 C - 6 T vs. G - - >1 (-) 38 (-) >0.05
rs149949768 chr19:2244059 SF3A2 C - 6 T vs. C - - >1 (-) 39 (-) >0.05
rs55861568 chr19:2280211 C19orf35 C - 11 A vs. G - - >1 (-) 0 (-) >0.05
rs7252541 chr19:2292741 LINGO3 C - 11 C vs. G - - <1 (-) 0 (-) >0.05
rs145366197 chr19:2292293 LINGO3 C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs73919909 chr19:2221541 DOT1L C - 11 A vs. G - 0.242 (G) >1 (-) 36 (-) >0.05
rs62119705 chr19:2279746 C19orf35 C - 10 T vs. C 0.35 (C) 0.342 (C) <1 (-) 20 (-) >0.05
rs6510654 chr19:2284958 C19orf35 [+2777bp] C - 11 T vs. C 0.2 (C) 0.375 (T) <1 (-) 0 (-) >0.05
rs8110704 chr19:2293602 LINGO3 C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs78147107 chr19:2222890 DOT1L C - 10 A vs. C 0.083 (C) - <1 (-) 14 (-) >0.05
rs144270226 chr19:2285462 C19orf35 [+3281bp] C - 11 T vs. C - - >1 (-) 0 (-) >0.05
rs75613123 chr19:2223275 DOT1L C - 11 T vs. C 0.042 (T) 0.1 (T) <1 (-) 0 (-) >0.05
rs78089855 chr19:2199576 DOT1L C - 11 T vs. C 0.025 (T) 0.075 (T) <1 (-) 0 (-) >0.05
rs117504281 chr19:2200912 DOT1L C - 11 T vs. C 0.025 (T) 0.1 (T) <1 (-) 0 (-) >0.05
rs78481493 chr19:2238719 SF3A2 C - 6 A vs. C 0.025 (A) 0.033 (A) <1 (-) 2 (-) >0.05
rs12459507 chr19:2224387 DOT1L C - 11 A vs. C 0.067 (C) 0.233 (C) >1 (-) 28 (-) >0.05
rs111610547 chr19:2201297 DOT1L C - 11 T vs. C 0.025 (T) 0.108 (T) <1 (-) 1 (-) >0.05
rs78835017 chr19:2201395 DOT1L C - 11 T vs. C - 0.092 (C) >1 (-) 1 (-) >0.05
rs757233 chr19:2285196 C19orf35 [+3015bp] C - 11 T vs. C 0.1 (C) 0.108 (C) <1 (-) 0 (-) >0.05
rs79712071 chr19:2221892 DOT1L C - 10 A vs. C 0.058 (A) - >1 (-) 0 (-) >0.05
rs146982937 chr19:2240303 SF3A2 C - 11 A vs. G - - <1 (-) 31 (-) >0.05
rs77337731 chr19:2225082 DOT1L C - 11 A vs. G 0.025 (G) 0.1 (G) >1 (-) 0 (-) >0.05
rs10420708 chr19:2283384 C19orf35 [+1203bp] C - 11 T vs. G 0.15 (G) 0.367 (G) <1 (-) 0 (-) >0.05
rs117415941 chr19:2237261 PLEKHJ1 C - 11 T vs. G 0.042 (G) - >1 (-) 29 (-) >0.05
rs2302061 chr19:2226772 DOT1L C - 11 C vs. G - 0.225 (C) <1 (-) 29 (-) >0.05
rs2301798 chr19:2207549 DOT1L C - 11 T vs. C - 0.075 (T) <1 (-) 0 (-) >0.05
rs2240130 chr19:2201898 DOT1L C - 11 A vs. G 0.267 (A) 0.442 (A) <1 (-) 0 (-) >0.05
rs2074861 chr19:2246652 SF3A2 C - 11 A vs. G 0.142 (G) 0.442 (G) >1 (-) 0 (-) >0.05
rs118025671 chr19:2219783 DOT1L C - 11 A vs. G 0.058 (A) - >1 (-) 4 (-) >0.05
rs2074860 chr19:2244072 SF3A2 C - 11 A vs. G 0.142 (G) 0.433 (G) >1 (-) 0 (-) >0.05
rs111785160 chr19:2191796 DOT1L C - 11 A vs. C - 0.1 (C) >1 (-) 0 (-) >0.05
rs7254430 chr19:2187853 DOT1L C - 11 A vs. G - - >1 (-) 10 (-) >0.05

Association studies for this region [+]