SLC25A39, chr17:42396993-42402238 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs5910 chr17:42449789 ITGA2B All: C 105,041 14 A vs. G 0.333 (A) 0.35 (A) 1.08 (1.05-1.12) 0 (0-44) 2.51e-06
Meta_image?name=rs5910

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs850726 chr17:42354132 SLC4A1 [+8623bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs7221824 chr17:42406644 SLC25A39 [+4406bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs9908921 chr17:42353840 SLC4A1 [+8331bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs7222501 chr17:42354657 SLC4A1 [+9148bp] C - 13 T vs. C 0.333 (T) 0.392 (C) <1 (-) 0 (-) >0.05
rs62640053 chr17:42393999 RUNDC3A C - 7 A vs. G - - >1 (-) 0 (-) >0.05
rs13307434 chr17:42446937 ITGA2B [-2611bp] C - 11 C vs. G - - >1 (-) 0 (-) >0.05
rs8071842 chr17:42418594 GRN [-4020bp] C - 13 T vs. C 0.383 (T) - <1 (-) 0 (-) >0.05
rs1823856 chr17:42352057 SLC4A1 [+6548bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs850715 chr17:42409562 SLC25A39 [+7324bp] C - 12 T vs. C - - >1 (-) 17 (-) >0.05
rs141317220 chr17:42374267 RNU6-453P [-10189bp] C - 10 T vs. C - - <1 (-) 0 (-) >0.05
rs68030960 chr17:42392077 RUNDC3A C - 13 T vs. C 0.375 (C) 0.117 (T) >1 (-) 0 (-) >0.05
rs147166848 chr17:42414442 GRN [-8172bp] C - 8 T vs. C - - <1 (-) 0 (-) >0.05
rs7216307 chr17:42413481 GRN [-9133bp] C - 13 T vs. C 0.375 (T) 0.117 (C) >1 (-) 31 (-) >0.05
rs850723 chr17:42370177 RNU6-453P [-14279bp] C - 13 T vs. C 0.458 (C) 0.1 (T) >1 (-) 0 (-) >0.05
rs11654436 chr17:42393462 RUNDC3A C - 13 A vs. C 0.375 (C) 0.1 (A) >1 (-) 0 (-) >0.05
rs1823855 chr17:42352102 SLC4A1 [+6593bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs10852960 chr17:42379953 RNU6-453P [-4503bp] C - 13 A vs. G 0.375 (G) 0.117 (A) >1 (-) 0 (-) >0.05
rs4042962 chr17:42418967 GRN [-3647bp] C - 13 A vs. G 0.408 (A) 0.117 (G) <1 (-) 0 (-) >0.05
rs8067008 chr17:42356098 SLC4A1 [+10589bp] C - 13 A vs. C 0.317 (C) - >1 (-) 0 (-) >0.05
rs7209097 chr17:42356613 SLC4A1 [+11104bp] C - 13 T vs. C 0.317 (C) - >1 (-) 0 (-) >0.05
rs17614452 chr17:42355698 SLC4A1 [+10189bp] C - 13 T vs. C 0.317 (T) 0.017 (T) <1 (-) 0 (-) >0.05
rs4793096 chr17:42415430 GRN [-7184bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs4793097 chr17:42415727 GRN [-6887bp] C - 13 A vs. G 0.392 (A) 0.133 (G) <1 (-) 0 (-) >0.05
rs4793092 chr17:42400480 SLC25A39 C - 13 A vs. G 0.425 (G) 0.1 (A) >1 (-) 0 (-) >0.05
rs9890354 chr17:42372068 RNU6-453P [-12388bp] C - 13 T vs. C 0.367 (C) 0.117 (T) >1 (-) 0 (-) >0.05
rs2011951 chr17:42398052 SLC25A39 C - 13 A vs. G 0.375 (G) 0.117 (A) >1 (-) 0 (-) >0.05
rs7213794 chr17:42362104 SLC4A1 [+16595bp] C - 13 A vs. G - - >1 (-) 1 (-) >0.05
rs2011895 chr17:42398757 SLC25A39 C - 13 A vs. C 0.367 (A) 0.117 (C) <1 (-) 0 (-) >0.05
rs7224687 chr17:42356804 SLC4A1 [+11295bp] C - 13 A vs. C 0.317 (C) - >1 (-) 0 (-) >0.05
rs9898704 chr17:42373463 RNU6-453P [-10993bp] C - 13 A vs. C 0.375 (C) 0.117 (A) >1 (-) 0 (-) >0.05
rs117480593 chr17:42442504 FAM171A2 [+1261bp] C - 11 A vs. G 0.008 (A) - >1 (-) 8 (-) >0.05
rs4792935 chr17:42370801 RNU6-453P [-13655bp] C - 13 A vs. G 0.375 (G) 0.1 (A) >1 (-) 0 (-) >0.05
rs4793091 chr17:42400417 SLC25A39 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs12601548 chr17:42406560 SLC25A39 [+4322bp] C - 13 T vs. C 0.4 (T) 0.142 (C) <1 (-) 0 (-) >0.05
rs6503366 chr17:42357773 SLC4A1 [+12264bp] C - 13 A vs. G 0.308 (A) - <1 (-) 0 (-) >0.05
rs143649376 chr17:42450747 ITGA2B C - 7 A vs. G - - >1 (-) 0 (-) >0.05
rs11651393 chr17:42382404 RNU6-453P [-2052bp] C - 13 T vs. C 0.35 (T) 0.133 (C) >1 (-) 0 (-) >0.05
rs4792937 chr17:42421862 GRN [-752bp] C - 13 T vs. C 0.417 (C) 0.117 (T) >1 (-) 0 (-) >0.05
rs3785818 chr17:42389278 RUNDC3A C - 13 C vs. G 0.317 (C) 0.075 (G) >1 (-) 0 (-) >0.05
rs140931982 chr17:42358333 SLC4A1 [+12824bp] C - 8 A vs. G - - <1 (-) 0 (-) >0.05
rs9900840 chr17:42450066 ITGA2B C - 5 A vs. G - - <1 (-) 0 (-) >0.05
rs8073068 chr17:42359168 SLC4A1 [+13659bp] C - 13 A vs. C 0.308 (A) - <1 (-) 1 (-) >0.05
rs112718682 chr17:42359324 SLC4A1 [+13815bp] C - 13 A vs. C 0.308 (C) 0.025 (C) >1 (-) 1 (-) >0.05
rs2014720 chr17:42375314 RNU6-453P [-9142bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs850714 chr17:42417496 GRN [-5118bp] C - 13 A vs. G 0.317 (G) 0.017 (G) >1 (-) 30 (-) >0.05
rs708386 chr17:42392622 RUNDC3A C - 13 T vs. C 0.333 (C) 0.133 (T) >1 (-) 0 (-) >0.05
rs10852959 chr17:42378198 RNU6-453P [-6258bp] C - 13 C vs. G - - >1 (-) 0 (-) >0.05
rs7219704 chr17:42380077 RNU6-453P [-4379bp] C - 13 T vs. C 0.342 (C) 0.133 (T) <1 (-) 0 (-) >0.05
rs10933070 chr17:42447056 ITGA2B [-2492bp] C - 13 T vs. C - - <1 (-) 47 (-) >0.05
chr17:42360396 chr17:42360396 SLC4A1 [+14887bp] C - 6 A vs. T - - >1 (-) 0 (-) >0.05

Association studies for this region [+]