SOCS3, chr17:76352864-76356158 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs34337072 chr17:76372398 PGS1 [-2323bp] C - 13 A vs. G 0.208 (G) - <1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs77483524 chr17:76404280 PGS1 C - 12 A vs. G 0.117 (G) 0.383 (G) >1 (-) 0 (-) >0.05
rs111661128 chr17:76403698 PGS1 C - 13 A vs. G 0.025 (A) - <1 (-) 20 (-) >0.05
rs72899798 chr17:76372972 PGS1 [-1749bp] C - 13 T vs. C 0.058 (C) 0.175 (C) >1 (-) 0 (-) >0.05
rs17642134 chr17:76333353 SOCS3 [-19511bp] C - 9 A vs. G 0.042 (A) - >1 (-) 31 (-) >0.05
rs72911373 chr17:76373028 PGS1 [-1693bp] C - 13 T vs. C 0.058 (T) 0.2 (T) <1 (-) 0 (-) >0.05
rs9892622 chr17:76346122 SOCS3 [-6742bp] C - 9 A vs. G 0.383 (G) 0.475 (A) >1 (-) 21 (-) >0.05
rs60628976 chr17:76321433 SOCS3 [-31431bp] C - 12 C vs. G 0.108 (C) 0.217 (C) <1 (-) 0 (-) >0.05
rs68015079 chr17:76318623 SOCS3 [-34241bp] C - 11 A vs. G 0.058 (A) 0.258 (A) <1 (-) 0 (-) >0.05
rs7208791 chr17:76327866 SOCS3 [-24998bp] C - 12 A vs. G - - >1 (-) 44 (-) >0.05
rs4366775 chr17:76382079 PGS1 C - 13 T vs. C 0.458 (T) 0.5 (T) >1 (-) 0 (-) >0.05
rs3744220 chr17:76400230 PGS1 C - 12 A vs. G 0.083 (A) 0.408 (A) <1 (-) 2 (-) >0.05
rs7213117 chr17:76319685 SOCS3 [-33179bp] C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs4789578 chr17:76320687 SOCS3 [-32177bp] C - 13 A vs. T 0.233 (T) 0.175 (T) >1 (-) 50 (-) >0.05
rs112884867 chr17:76336094 SOCS3 [-16770bp] C - 12 A vs. C - - <1 (-) 0 (-) >0.05
rs55962646 chr17:76342920 SOCS3 [-9944bp] C - 9 T vs. C 0.1 (C) 0.25 (C) >1 (-) 7 (-) >0.05
rs938348 chr17:76381021 PGS1 C - 13 T vs. C 0.442 (C) 0.333 (T) <1 (-) 0 (-) >0.05
rs73998019 chr17:76310967 SOCS3 [-41897bp] C - 7 T vs. C 0.017 (T) - <1 (-) 23 (-) >0.05
rs9902532 chr17:76307308 SOCS3 [-45556bp] C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs8065221 chr17:76327387 SOCS3 [-25477bp] C - 12 A vs. G - - >1 (-) 44 (-) >0.05
rs56160231 chr17:76323785 SOCS3 [-29079bp] C - 9 T vs. G - - <1 (-) 0 (-) >0.05
rs2292641 chr17:76395634 PGS1 C - 12 T vs. C 0.142 (T) 0.275 (T) <1 (-) 0 (-) >0.05
rs116130032 chr17:76313663 SOCS3 [-39201bp] C - 7 A vs. C 0.033 (C) - >1 (-) 22 (-) >0.05
rs12937653 chr17:76335084 SOCS3 [-17780bp] C - 12 T vs. C 0.083 (C) - >1 (-) 0 (-) >0.05
rs68006051 chr17:76320491 SOCS3 [-32373bp] C - 11 A vs. G 0.108 (A) 0.2 (A) <1 (-) 0 (-) >0.05
rs11656568 chr17:76378869 PGS1 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs8073753 chr17:76385310 PGS1 C - 12 T vs. C 0.1 (C) 0.058 (C) <1 (-) 0 (-) >0.05
rs7221341 chr17:76331471 SOCS3 [-21393bp] C - 12 T vs. C 0.358 (T) 0.0 (T) <1 (-) 47 (-) >0.05
rs4082919 chr17:76377482 PGS1 C - 13 T vs. G 0.458 (G) 0.5 (G) <1 (-) 0 (-) >0.05
rs55905899 chr17:76400221 PGS1 C - 12 T vs. C 0.1 (C) - <1 (-) 0 (-) >0.05
rs55818563 chr17:76387376 PGS1 C - 12 T vs. C 0.1 (T) 0.058 (T) >1 (-) 0 (-) >0.05
rs4490057 chr17:76375095 PGS1 C - 13 A vs. G 0.458 (A) 0.417 (G) >1 (-) 0 (-) >0.05
rs11871028 chr17:76404655 PGS1 C - 12 T vs. C 0.1 (T) - >1 (-) 0 (-) >0.05
rs116876036 chr17:76393762 PGS1 C - 12 T vs. C 0.1 (T) - >1 (-) 0 (-) >0.05
rs62075746 chr17:76386915 PGS1 C - 12 T vs. C 0.1 (T) 0.058 (T) >1 (-) 0 (-) >0.05
rs7222111 chr17:76386809 PGS1 C - 12 T vs. C 0.1 (T) 0.058 (T) >1 (-) 0 (-) >0.05
rs141004694 chr17:76316529 SOCS3 [-36335bp] C - 3 T vs. C - - <1 (-) 0 (-) >0.05
rs62079153 chr17:76370896 PGS1 [-3825bp] C - 13 T vs. C 0.45 (C) 0.367 (T) <1 (-) 0 (-) >0.05
rs56658017 chr17:76396164 PGS1 C - 13 A vs. G 0.367 (G) 0.458 (G) <1 (-) 0 (-) >0.05
rs113417153 chr17:76373179 PGS1 [-1542bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs12951460 chr17:76370557 PGS1 [-4164bp] C - 13 T vs. C 0.45 (C) 0.408 (T) <1 (-) 0 (-) >0.05
rs11658269 chr17:76345109 SOCS3 [-7755bp] C - 9 A vs. C 0.117 (A) 0.025 (A) >1 (-) 49 (-) >0.05
rs72911395 chr17:76391386 PGS1 C - 13 A vs. T 0.058 (T) 0.192 (T) >1 (-) 0 (-) >0.05
rs7221930 chr17:76386578 PGS1 C - 12 T vs. G 0.1 (T) 0.058 (T) >1 (-) 0 (-) >0.05
rs12602692 chr17:76403590 PGS1 C - 12 A vs. C - - >1 (-) 0 (-) >0.05
rs8072820 chr17:76385381 PGS1 C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs11871046 chr17:76404786 PGS1 C - 12 T vs. C 0.1 (T) - >1 (-) 0 (-) >0.05
rs8068866 chr17:76385267 PGS1 C - 12 T vs. C 0.1 (T) 0.058 (T) >1 (-) 0 (-) >0.05
rs56327721 chr17:76405302 PGS1 C - 12 T vs. C 0.1 (T) - >1 (-) 0 (-) >0.05
rs59448037 chr17:76389120 PGS1 C - 12 T vs. C 0.1 (T) 0.058 (T) >1 (-) 0 (-) >0.05
rs55829039 chr17:76398268 PGS1 C - 9 T vs. G 0.017 (T) - >1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.