SOCS3, chr17:76352864-76356158 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs34337072 chr17:76372398 PGS1 [-2323bp] C - 13 A vs. G 0.208 (G) - <1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs12453354 chr17:76380126 PGS1 C - 13 A vs. G 0.058 (A) 0.15 (A) <1 (-) 0 (-) >0.05
rs62075745 chr17:76384680 PGS1 C - 12 A vs. G 0.1 (A) - >1 (-) 0 (-) >0.05
rs8072666 chr17:76385331 PGS1 C - 12 A vs. C - 0.058 (A) >1 (-) 0 (-) >0.05
rs72899786 chr17:76368299 PGS1 [-6422bp] C - 13 T vs. C - 0.15 (C) >1 (-) 3 (-) >0.05
rs62075744 chr17:76384438 PGS1 C - 12 T vs. C 0.1 (T) 0.058 (T) >1 (-) 0 (-) >0.05
rs72899785 chr17:76368295 PGS1 [-6426bp] C - 13 A vs. G - 0.133 (G) >1 (-) 3 (-) >0.05
rs62075742 chr17:76384278 PGS1 C - 12 C vs. G 0.1 (C) 0.05 (C) >1 (-) 0 (-) >0.05
rs113938217 chr17:76344959 SOCS3 [-7905bp] C - 9 A vs. C 0.142 (C) - <1 (-) 23 (-) >0.05
rs3817295 chr17:76394526 PGS1 C - 13 A vs. T 0.367 (T) 0.458 (T) <1 (-) 0 (-) >0.05
rs62075739 chr17:76383333 PGS1 C - 12 T vs. C 0.092 (C) - <1 (-) 0 (-) >0.05
rs3744217 chr17:76400258 PGS1 C - 13 A vs. G 0.367 (G) 0.483 (A) <1 (-) 0 (-) >0.05
rs72894765 chr17:76321108 SOCS3 [-31756bp] C - 9 T vs. C 0.083 (T) - >1 (-) 37 (-) >0.05
rs8068516 chr17:76385021 PGS1 C - 12 T vs. C 0.1 (T) 0.058 (T) >1 (-) 0 (-) >0.05
rs62075741 chr17:76384220 PGS1 C - 12 A vs. G 0.1 (A) - >1 (-) 0 (-) >0.05
rs62075743 chr17:76384315 PGS1 C - 12 T vs. C 0.092 (C) - <1 (-) 0 (-) >0.05
rs8075131 chr17:76394595 PGS1 C - 13 T vs. G 0.367 (T) 0.458 (T) >1 (-) 0 (-) >0.05
rs111432639 chr17:76398636 PGS1 C - 3 T vs. C - - >1 (-) 0 (-) >0.05
rs6501208 chr17:76395038 PGS1 C - 13 A vs. T 0.358 (A) 0.458 (A) >1 (-) 0 (-) >0.05
rs8076673 chr17:76331404 SOCS3 [-21460bp] C - 12 A vs. G 0.15 (G) - >1 (-) 0 (-) >0.05
rs16971107 chr17:76394042 PGS1 C - 13 A vs. G 0.367 (G) 0.458 (G) <1 (-) 0 (-) >0.05
rs16971105 chr17:76393975 PGS1 C - 13 T vs. G 0.367 (G) 0.458 (G) <1 (-) 0 (-) >0.05
rs12944051 chr17:76395856 PGS1 C - 13 A vs. G 0.367 (A) 0.458 (A) >1 (-) 0 (-) >0.05
rs3826323 chr17:76400268 PGS1 C - 13 C vs. G 0.358 (C) 0.483 (G) >1 (-) 0 (-) >0.05
rs7208596 chr17:76396528 PGS1 C - 13 C vs. G 0.375 (C) 0.458 (C) >1 (-) 0 (-) >0.05
rs8069695 chr17:76385044 PGS1 C - 12 T vs. C 0.108 (C) 0.058 (C) <1 (-) 0 (-) >0.05
rs12451791 chr17:76397343 PGS1 C - 13 A vs. G 0.367 (G) 0.458 (G) <1 (-) 0 (-) >0.05
rs73999306 chr17:76384534 PGS1 C - 12 T vs. C 0.042 (C) 0.058 (C) <1 (-) 0 (-) >0.05
rs4969185 chr17:76398157 PGS1 C - 13 C vs. G 0.4 (G) 0.458 (G) <1 (-) 0 (-) >0.05
rs4969186 chr17:76398404 PGS1 C - 13 C vs. G 0.367 (G) 0.458 (G) <1 (-) 0 (-) >0.05
rs11658382 chr17:76315125 SOCS3 [-37739bp] C - 10 A vs. G 0.158 (A) - >1 (-) 0 (-) >0.05
rs73999305 chr17:76384533 PGS1 C - 12 A vs. G 0.042 (G) - <1 (-) 0 (-) >0.05
rs2292643 chr17:76395421 PGS1 C - 13 A vs. G 0.367 (G) 0.458 (G) <1 (-) 0 (-) >0.05
rs2292642 chr17:76395430 PGS1 C - 13 T vs. C 0.367 (C) 0.458 (C) <1 (-) 0 (-) >0.05
rs137880864 chr17:76326219 SOCS3 [-26645bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs3817294 chr17:76396963 PGS1 C - 13 A vs. G 0.367 (A) 0.458 (A) >1 (-) 0 (-) >0.05
rs7212201 chr17:76393896 PGS1 C - 13 A vs. C 0.375 (C) 0.458 (C) <1 (-) 0 (-) >0.05
rs12943881 chr17:76369670 PGS1 [-5051bp] C - 13 T vs. C 0.392 (C) 0.292 (T) <1 (-) 0 (-) >0.05
rs73378182 chr17:76328254 SOCS3 [-24610bp] C - 11 T vs. C 0.033 (T) 0.075 (T) <1 (-) 9 (-) >0.05
rs3744219 chr17:76400236 PGS1 C - 13 A vs. G 0.392 (G) 0.492 (A) <1 (-) 0 (-) >0.05
rs11077363 chr17:76397309 PGS1 C - 13 T vs. C 0.375 (C) 0.458 (C) <1 (-) 0 (-) >0.05
rs12451715 chr17:76397334 PGS1 C - 13 A vs. C 0.367 (A) 0.458 (A) >1 (-) 0 (-) >0.05
rs4789588 chr17:76333081 SOCS3 [-19783bp] C - 12 T vs. C 0.15 (T) - <1 (-) 0 (-) >0.05
rs6501207 chr17:76364099 SOCS3 [+7941bp] C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs56971055 chr17:76382296 PGS1 C - 12 A vs. C 0.117 (C) 0.433 (C) >1 (-) 4 (-) >0.05
rs938350 chr17:76399552 PGS1 C - 13 A vs. G 0.367 (G) 0.492 (A) <1 (-) 0 (-) >0.05
rs8071884 chr17:76398058 PGS1 C - 13 C vs. G 0.367 (C) 0.458 (C) >1 (-) 0 (-) >0.05
rs4580257 chr17:76403028 PGS1 C - 13 T vs. G 0.375 (T) 0.5 (T) >1 (-) 0 (-) >0.05
rs117779875 chr17:76319728 SOCS3 [-33136bp] C - 12 A vs. G 0.017 (A) - <1 (-) 0 (-) >0.05
rs62075738 chr17:76383319 PGS1 C - 12 A vs. G 0.092 (G) - <1 (-) 0 (-) >0.05
rs2292640 chr17:76396610 PGS1 C - 13 A vs. G 0.367 (G) 0.458 (G) <1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.