SPTSSB, chr3:161062580-161090668 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1450522 chr3:161077630 SPTSSB C - 13 A vs. G 0.35 (G) 0.433 (A) <1 (-) 22 (-) <1.00e-06

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs899275 chr3:161042104 SPTSSB [-20476bp] C - 13 T vs. C 0.467 (C) 0.258 (T) <1 (-) 9 (-) <1.00e-04
rs6791213 chr3:161033721 SPTSSB [-28859bp] C - 13 A vs. G 0.467 (G) 0.217 (A) <1 (-) 8 (-) <1.00e-04
rs6809256 chr3:161026513 SPTSSB [-36067bp] C - 13 A vs. G 0.45 (A) 0.233 (G) >1 (-) 10 (-) <1.00e-04
rs336568 chr3:161072763 SPTSSB C - 13 C vs. G 0.475 (C) 0.133 (G) >1 (-) 6 (-) <1.00e-04
rs336580 chr3:161082982 SPTSSB C - 13 A vs. T 0.475 (T) 0.125 (A) <1 (-) 15 (-) <0.05
rs466626 chr3:161103629 SPTSSB [+12961bp] C - 13 A vs. C 0.492 (C) 0.025 (A) <1 (-) 5 (-) <0.05
rs459515 chr3:161092351 SPTSSB [+1683bp] C - 13 T vs. C 0.475 (C) 0.133 (T) <1 (-) 3 (-) <0.05
rs336551 chr3:161109720 SPTSSB [+19052bp] C - 13 T vs. C 0.492 (C) 0.033 (T) <1 (-) 6 (-) <0.05
rs336561 chr3:161125305 SPTSSB [+34637bp] C - 13 T vs. C 0.492 (T) 0.033 (C) >1 (-) 9 (-) <0.05
rs339114 chr3:161109220 SPTSSB [+18552bp] C - 13 A vs. G 0.492 (G) 0.033 (A) <1 (-) 4 (-) <0.05
rs462514 chr3:161092809 SPTSSB [+2141bp] C - 13 T vs. C 0.475 (T) 0.133 (C) >1 (-) 0 (-) <0.05
rs2061804 chr3:161102474 SPTSSB [+11806bp] C - 13 A vs. C 0.417 (A) 0.433 (C) >1 (-) 13 (-) <0.05
rs336579 chr3:161086610 SPTSSB C - 13 A vs. G 0.492 (G) 0.0 (G) >1 (-) 0 (-) <0.05
rs336586 chr3:161081347 SPTSSB C - 13 A vs. G 0.5 (A) - >1 (-) 0 (-) <0.05
rs457272 chr3:161096746 SPTSSB [+6078bp] C - 13 A vs. G 0.5 (G) 0.0 (A) <1 (-) 0 (-) <0.05
rs466399 chr3:161091194 SPTSSB [+526bp] C - 13 T vs. G 0.492 (T) 0.008 (G) >1 (-) 6 (-) <0.05
rs336589 chr3:161080358 SPTSSB C - 13 T vs. C 0.492 (C) 0.0 (C) >1 (-) 0 (-) <0.05
rs336590 chr3:161079583 SPTSSB C - 13 A vs. G 0.492 (G) 0.008 (G) >1 (-) 0 (-) <0.05
rs460165 chr3:161087710 SPTSSB C - 13 A vs. G 0.5 (G) 0.0 (G) >1 (-) 0 (-) <0.05
rs463928 chr3:161087734 SPTSSB C - 13 A vs. T 0.5 (A) - <1 (-) 0 (-) <0.05
rs336593 chr3:161076431 SPTSSB C - 13 T vs. C 0.492 (T) 0.0 (T) <1 (-) 0 (-) <0.05
rs336591 chr3:161078080 SPTSSB C - 13 A vs. G 0.492 (A) 0.008 (A) <1 (-) 0 (-) <0.05
rs163328 chr3:161073599 SPTSSB C - 13 A vs. G 0.492 (A) 0.008 (A) <1 (-) 0 (-) <0.05
rs336567 chr3:161073046 SPTSSB C - 13 A vs. G 0.492 (A) 0.0 (A) <1 (-) 0 (-) <0.05
rs336570 chr3:161072054 SPTSSB C - 13 A vs. G 0.492 (G) 0.008 (G) >1 (-) 0 (-) <0.05
rs336583 chr3:161081981 SPTSSB C - 13 A vs. T 0.492 (T) - >1 (-) 0 (-) <0.05
rs336585 chr3:161081670 SPTSSB C - 13 A vs. G 0.492 (A) 0.008 (A) <1 (-) 0 (-) <0.05
rs336569 chr3:161072346 SPTSSB C - 13 T vs. G 0.492 (T) 0.008 (T) <1 (-) 0 (-) <0.05
rs460508 chr3:161091089 SPTSSB [+421bp] C - 13 C vs. G 0.492 (G) - >1 (-) 0 (-) <0.05
rs459697 chr3:161093420 SPTSSB [+2752bp] C - 13 A vs. G 0.492 (G) 0.008 (G) >1 (-) 0 (-) <0.05
rs464766 chr3:161087592 SPTSSB C - 13 C vs. G 0.492 (C) 0.008 (C) <1 (-) 0 (-) <0.05
rs456611 chr3:161097268 SPTSSB [+6600bp] C - 13 A vs. G 0.492 (A) 0.008 (A) <1 (-) 0 (-) <0.05
rs336577 chr3:161066294 SPTSSB C - 13 T vs. C 0.492 (C) 0.0 (C) >1 (-) 0 (-) <0.05
rs465985 chr3:161098552 SPTSSB [+7884bp] C - 13 T vs. C 0.492 (T) 0.008 (T) <1 (-) 0 (-) <0.05
rs7631479 chr3:161139566 SPTSSB [+48898bp] C - 13 T vs. C 0.475 (T) 0.292 (C) >1 (-) 11 (-) <0.05
rs62279921 chr3:161065441 SPTSSB C - 13 T vs. C 0.492 (T) - <1 (-) 9 (-) <0.05
rs462413 chr3:161101587 SPTSSB [+10919bp] C - 13 T vs. C 0.492 (T) 0.017 (T) <1 (-) 0 (-) <0.05
rs455386 chr3:161102495 SPTSSB [+11827bp] C - 13 A vs. T 0.492 (A) 0.017 (A) <1 (-) 0 (-) <0.05
rs461638 chr3:161103166 SPTSSB [+12498bp] C - 13 A vs. G 0.492 (A) 0.017 (A) <1 (-) 0 (-) <0.05
rs2004862 chr3:161135638 SPTSSB [+44970bp] C - 13 T vs. C 0.475 (T) 0.308 (C) >1 (-) 1 (-) <0.05
rs336549 chr3:161114968 SPTSSB [+24300bp] C - 13 T vs. C - - <1 (-) 0 (-) <0.05
rs9863590 chr3:161116445 SPTSSB [+25777bp] C - 13 T vs. C 0.5 (C) 0.008 (T) <1 (-) 0 (-) <0.05
rs4856705 chr3:161100219 SPTSSB [+9551bp] C - 13 T vs. G 0.45 (G) 0.292 (T) <1 (-) 13 (-) <0.05
rs339101 chr3:161064193 SPTSSB C - 13 A vs. T 0.5 (T) 0.025 (A) <1 (-) 0 (-) <0.05
rs189270 chr3:161063504 SPTSSB C - 13 T vs. C 0.492 (T) 0.0 (T) <1 (-) 0 (-) <0.05
rs9872514 chr3:161042833 SPTSSB [-19747bp] C - 13 T vs. C 0.492 (T) 0.092 (T) <1 (-) 0 (-) <0.05
rs336543 chr3:161061080 SPTSSB [-1500bp] C - 13 T vs. C 0.492 (T) 0.008 (T) <1 (-) 0 (-) <0.05
rs336541 chr3:161056698 SPTSSB [-5882bp] C - 13 A vs. C 0.5 (A) 0.008 (A) <1 (-) 0 (-) <0.05
rs1382428 chr3:161032386 SPTSSB [-30194bp] C - 13 A vs. C 0.492 (A) 0.008 (A) <1 (-) 0 (-) <0.05
rs28515190 chr3:161028605 SPTSSB [-33975bp] C - 13 A vs. G 0.492 (G) 0.0 (G) >1 (-) 0 (-) <0.05

Association studies for this region [+]