SPTSSB, chr3:161062580-161090668 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1450522 chr3:161077630 SPTSSB C - 13 A vs. G 0.35 (G) 0.433 (A) <1 (-) 22 (-) <1.00e-06

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs115936894 chr3:161068644 SPTSSB C - 12 T vs. C 0.025 (C) - >1 (-) 33 (-) >0.05
rs116456922 chr3:161066522 SPTSSB C - 12 T vs. C 0.025 (T) - <1 (-) 33 (-) >0.05
rs114131957 chr3:161066734 SPTSSB C - 12 T vs. C 0.025 (C) - >1 (-) 33 (-) >0.05
rs13327338 chr3:161058645 SPTSSB [-3935bp] C - 4 A vs. C - - >1 (-) 6 (-) >0.05
rs12632537 chr3:161109267 SPTSSB [+18599bp] C - 12 A vs. G 0.017 (A) 0.133 (A) <1 (-) 7 (-) >0.05
rs147661121 chr3:161065779 SPTSSB C - 8 A vs. G - - >1 (-) 0 (-) >0.05
rs116133612 chr3:161048210 SPTSSB [-14370bp] C - 12 C vs. G 0.025 (G) - >1 (-) 36 (-) >0.05
rs73162552 chr3:161070700 SPTSSB C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs59964190 chr3:161053949 SPTSSB [-8631bp] C - 12 T vs. C 0.025 (T) - <1 (-) 35 (-) >0.05
rs147750993 chr3:161122302 SPTSSB [+31634bp] C - 10 T vs. C - - <1 (-) 0 (-) >0.05
rs116587574 chr3:161022507 SPTSSB [-40073bp] C - 12 T vs. C 0.025 (T) - <1 (-) 35 (-) >0.05
rs150926474 chr3:161055904 SPTSSB [-6676bp] C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs115117205 chr3:161127346 SPTSSB [+36678bp] C - 10 A vs. G 0.025 (A) - <1 (-) 0 (-) >0.05
rs115602379 chr3:161014501 NMD3 [+43181bp] C - 12 A vs. T 0.025 (T) 0.017 (T) >1 (-) 35 (-) >0.05
rs115235497 chr3:161060075 SPTSSB [-2505bp] C - 12 T vs. C 0.025 (T) 0.025 (T) <1 (-) 34 (-) >0.05
rs140785423 chr3:161073255 SPTSSB C - 12 A vs. C - - >1 (-) 41 (-) >0.05
rs116613730 chr3:161059519 SPTSSB [-3061bp] C - 12 A vs. G - - >1 (-) 34 (-) >0.05
rs114845553 chr3:161059351 SPTSSB [-3229bp] C - 12 A vs. G 0.025 (A) - <1 (-) 34 (-) >0.05
rs115955036 chr3:161058799 SPTSSB [-3781bp] C - 12 T vs. C 0.008 (T) - <1 (-) 34 (-) >0.05
rs116516362 chr3:161058792 SPTSSB [-3788bp] C - 12 A vs. G 0.025 (A) - <1 (-) 34 (-) >0.05
rs116834079 chr3:161058614 SPTSSB [-3966bp] C - 12 T vs. G 0.025 (G) - >1 (-) 34 (-) >0.05
rs115792391 chr3:161057958 SPTSSB [-4622bp] C - 12 T vs. C 0.025 (T) - <1 (-) 34 (-) >0.05
rs116799153 chr3:161058317 SPTSSB [-4263bp] C - 12 A vs. G 0.025 (A) - <1 (-) 34 (-) >0.05
rs78931588 chr3:161033462 SPTSSB [-29118bp] C - 12 A vs. G 0.025 (A) 0.008 (A) <1 (-) 35 (-) >0.05
rs115507726 chr3:161035777 SPTSSB [-26803bp] C - 12 T vs. C - - <1 (-) 35 (-) >0.05
rs114795180 chr3:161056128 SPTSSB [-6452bp] C - 12 A vs. G 0.025 (A) - <1 (-) 34 (-) >0.05
rs115795758 chr3:161056279 SPTSSB [-6301bp] C - 12 T vs. C 0.025 (C) - >1 (-) 34 (-) >0.05
rs114154561 chr3:161056037 SPTSSB [-6543bp] C - 12 T vs. C 0.025 (T) - <1 (-) 34 (-) >0.05
rs115730998 chr3:161056034 SPTSSB [-6546bp] C - 12 T vs. G 0.008 (G) - >1 (-) 34 (-) >0.05
rs116347602 chr3:161055610 SPTSSB [-6970bp] C - 12 T vs. G 0.025 (G) - >1 (-) 34 (-) >0.05
rs114895094 chr3:161054807 SPTSSB [-7773bp] C - 12 A vs. G 0.025 (G) - >1 (-) 34 (-) >0.05
rs115860997 chr3:161051316 SPTSSB [-11264bp] C - 12 T vs. C 0.025 (T) - <1 (-) 35 (-) >0.05
rs57496534 chr3:161050707 SPTSSB [-11873bp] C - 12 T vs. C 0.025 (T) - <1 (-) 35 (-) >0.05
rs60612225 chr3:161050570 SPTSSB [-12010bp] C - 12 T vs. G - - >1 (-) 35 (-) >0.05
rs114350365 chr3:161054796 SPTSSB [-7784bp] C - 12 T vs. C 0.025 (T) 0.017 (T) <1 (-) 34 (-) >0.05
rs78670101 chr3:161054339 SPTSSB [-8241bp] C - 12 C vs. G 0.008 (G) 0.017 (G) >1 (-) 34 (-) >0.05
rs116831070 chr3:161054515 SPTSSB [-8065bp] C - 12 T vs. C 0.025 (C) - >1 (-) 35 (-) >0.05
rs57803909 chr3:161053566 SPTSSB [-9014bp] C - 12 A vs. T - - <1 (-) 35 (-) >0.05
rs116519000 chr3:161052896 SPTSSB [-9684bp] C - 12 A vs. G - - >1 (-) 35 (-) >0.05
rs7625217 chr3:161049816 SPTSSB [-12764bp] C - 12 A vs. G 0.025 (G) - >1 (-) 35 (-) >0.05
rs115819411 chr3:161051444 SPTSSB [-11136bp] C - 4 A vs. G 0.008 (A) - >1 (-) 0 (-) >0.05
rs114272449 chr3:161049400 SPTSSB [-13180bp] C - 12 T vs. C 0.025 (T) - <1 (-) 35 (-) >0.05
rs114886954 chr3:161049338 SPTSSB [-13242bp] C - 12 A vs. G 0.025 (A) - <1 (-) 35 (-) >0.05
rs138817800 chr3:161048218 SPTSSB [-14362bp] C - 12 A vs. G - - >1 (-) 35 (-) >0.05
rs60684226 chr3:161040425 SPTSSB [-22155bp] C - 12 A vs. G 0.025 (G) 0.033 (G) >1 (-) 35 (-) >0.05
rs115404711 chr3:161098515 SPTSSB [+7847bp] C - 13 T vs. C 0.025 (C) - >1 (-) 17 (-) >0.05
rs58350275 chr3:161041703 SPTSSB [-20877bp] C - 12 T vs. G - - <1 (-) 35 (-) >0.05
rs16832203 chr3:161102719 SPTSSB [+12051bp] C - 13 T vs. C 0.025 (T) 0.167 (T) <1 (-) 30 (-) >0.05
rs115806772 chr3:161047583 SPTSSB [-14997bp] C - 12 T vs. C 0.025 (C) - >1 (-) 35 (-) >0.05
rs57278490 chr3:161041505 SPTSSB [-21075bp] C - 12 C vs. G 0.017 (C) - <1 (-) 35 (-) >0.05

Association studies for this region [+]