SPTSSB, chr3:161062580-161090668 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1450522 chr3:161077630 SPTSSB C - 13 A vs. G 0.35 (G) 0.433 (A) <1 (-) 22 (-) <1.00e-06

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs78376802 chr3:161046846 SPTSSB [-15734bp] C - 12 T vs. G - 0.017 (T) <1 (-) 35 (-) >0.05
rs79447138 chr3:161046331 SPTSSB [-16249bp] C - 12 C vs. G 0.025 (G) - >1 (-) 35 (-) >0.05
rs147113798 chr3:161046492 SPTSSB [-16088bp] C - 12 A vs. G - - >1 (-) 35 (-) >0.05
rs111243945 chr3:161102560 SPTSSB [+11892bp] C - 3 C vs. G 0.017 (G) - >1 (-) 69 (-) >0.05
rs149759490 chr3:161111099 SPTSSB [+20431bp] C - 6 A vs. G - - >1 (-) 0 (-) >0.05
rs9818470 chr3:161018665 SPTSSB [-43915bp] C - 6 A vs. G - 0.083 (G) >1 (-) 0 (-) >0.05
rs12634006 chr3:161083709 SPTSSB C - 13 A vs. G 0.025 (G) 0.125 (G) >1 (-) 19 (-) >0.05
rs2306209 chr3:161089185 SPTSSB C - 9 A vs. G - 0.067 (G) >1 (-) 0 (-) >0.05
rs73878311 chr3:161085705 SPTSSB C - 13 A vs. G 0.017 (A) 0.125 (A) <1 (-) 18 (-) >0.05
rs73878308 chr3:161081551 SPTSSB C - 13 A vs. C 0.025 (A) 0.125 (A) <1 (-) 19 (-) >0.05
rs58557417 chr3:161086283 SPTSSB C - 12 T vs. C - - <1 (-) 30 (-) >0.05
rs16847274 chr3:161078966 SPTSSB C - 13 A vs. G 0.033 (A) - >1 (-) 0 (-) >0.05
rs55814004 chr3:161086237 SPTSSB C - 12 A vs. C - - <1 (-) 30 (-) >0.05
rs6793980 chr3:161098359 SPTSSB [+7691bp] C - 7 T vs. C - 0.1 (C) >1 (-) 0 (-) >0.05
rs73878313 chr3:161099744 SPTSSB [+9076bp] C - 12 T vs. G 0.025 (G) 0.133 (G) >1 (-) 22 (-) >0.05
rs141386449 chr3:161016111 NMD3 [+44791bp] C - 8 T vs. C - - <1 (-) 0 (-) >0.05
rs9862867 chr3:161014327 NMD3 [+43007bp] C - 5 A vs. G - 0.108 (A) <1 (-) 0 (-) >0.05
rs59541314 chr3:161101908 SPTSSB [+11240bp] C - 13 A vs. T 0.025 (T) 0.133 (T) >1 (-) 16 (-) >0.05
rs115161264 chr3:161116711 SPTSSB [+26043bp] C - 13 A vs. G 0.033 (A) 0.133 (A) <1 (-) 25 (-) >0.05
rs456858 chr3:161102784 SPTSSB [+12116bp] C - 11 A vs. T 0.05 (A) 0.417 (A) <1 (-) 42 (-) >0.05
rs7629841 chr3:161099277 SPTSSB [+8609bp] C - 7 C vs. G - 0.108 (G) >1 (-) 0 (-) >0.05
rs9859595 chr3:161119469 SPTSSB [+28801bp] C - 5 T vs. C 0.008 (T) - >1 (-) 9 (-) >0.05
rs73878307 chr3:161076899 SPTSSB C - 12 T vs. G 0.025 (G) 0.125 (G) >1 (-) 23 (-) >0.05
rs145187277 chr3:161135629 SPTSSB [+44961bp] C - 4 A vs. G - - >1 (-) 4 (-) >0.05
rs6787697 chr3:161100041 SPTSSB [+9373bp] C - 7 A vs. G - 0.092 (A) <1 (-) 0 (-) >0.05
rs9856362 chr3:161113787 SPTSSB [+23119bp] C - 3 T vs. C - - >1 (-) 38 (-) >0.05
rs150081942 chr3:161085689 SPTSSB C - 8 C vs. G - - >1 (-) 0 (-) >0.05
rs61217744 chr3:161074910 SPTSSB C - 12 A vs. G 0.025 (A) 0.125 (A) <1 (-) 23 (-) >0.05
rs59761692 chr3:161074861 SPTSSB C - 12 A vs. G 0.025 (A) 0.142 (A) <1 (-) 23 (-) >0.05
rs896080 chr3:161073856 SPTSSB C - 12 A vs. G 0.033 (A) 0.133 (A) <1 (-) 23 (-) >0.05
rs145442216 chr3:161068798 SPTSSB C - 9 C vs. G - - >1 (-) 0 (-) >0.05
rs873183 chr3:161072725 SPTSSB C - 12 A vs. G 0.025 (A) 0.125 (A) <1 (-) 24 (-) >0.05
rs73878325 chr3:161128787 SPTSSB [+38119bp] C - 13 A vs. C 0.025 (C) 0.133 (C) >1 (-) 21 (-) >0.05
rs12634319 chr3:161129711 SPTSSB [+39043bp] C - 13 A vs. G 0.025 (G) 0.133 (G) >1 (-) 21 (-) >0.05
rs148368744 chr3:161109954 SPTSSB [+19286bp] C - 5 A vs. G - - <1 (-) 0 (-) >0.05
rs73878321 chr3:161123888 SPTSSB [+33220bp] C - 13 A vs. G 0.025 (A) 0.133 (A) <1 (-) 21 (-) >0.05
rs73878322 chr3:161125871 SPTSSB [+35203bp] C - 13 T vs. C 0.025 (C) 0.133 (C) >1 (-) 21 (-) >0.05
rs79993368 chr3:161125925 SPTSSB [+35257bp] C - 13 A vs. G 0.025 (G) 0.025 (G) >1 (-) 21 (-) >0.05
rs143949082 chr3:161073170 SPTSSB C - 10 T vs. C - - >1 (-) 7 (-) >0.05
rs142344717 chr3:161102289 SPTSSB [+11621bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs114466814 chr3:161116318 SPTSSB [+25650bp] C - 8 A vs. G 0.017 (A) - <1 (-) 0 (-) >0.05
rs148751769 chr3:161102181 SPTSSB [+11513bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs59193340 chr3:161102287 SPTSSB [+11619bp] C - 11 T vs. C - 0.108 (T) >1 (-) 0 (-) >0.05
rs115379666 chr3:161140313 SPTSSB [+49645bp] C - 9 T vs. C 0.017 (C) - >1 (-) 0 (-) >0.05
rs73162554 chr3:161074362 SPTSSB C - 13 T vs. G 0.017 (G) - <1 (-) 0 (-) >0.05
rs60400555 chr3:161104907 SPTSSB [+14239bp] C - 12 A vs. G 0.025 (A) 0.133 (A) <1 (-) 25 (-) >0.05
rs62279930 chr3:161095577 SPTSSB [+4909bp] C - 13 A vs. C - - <1 (-) 0 (-) >0.05
rs115754329 chr3:161136262 SPTSSB [+45594bp] C - 13 T vs. C 0.025 (C) 0.017 (C) >1 (-) 18 (-) >0.05
rs62279929 chr3:161095539 SPTSSB [+4871bp] C - 13 T vs. G - - >1 (-) 0 (-) >0.05
rs12488127 chr3:161123526 SPTSSB [+32858bp] C - 4 T vs. C - 0.1 (C) <1 (-) 0 (-) >0.05

Association studies for this region [+]