STK39, chr2:168810530-169104651 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1955337 chr2:169129145 STK39 [+24494bp] All: C 120,238 21 T vs. G 0.083 (T) 0.317 (T) 1.21 (1.16-1.26) 17 (0-51) 1.67e-20
Meta_image?name=rs1955337

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs57262215 chr2:169086970 STK39 C - 10 T vs. C - 0.225 (T) >1 (-) 0 (-) >0.05
rs4667550 chr2:168898120 STK39 C - 13 C vs. G 0.45 (G) 0.258 (G) <1 (-) 0 (-) >0.05
rs9789702 chr2:168892418 STK39 C - 13 T vs. C 0.458 (C) 0.483 (T) <1 (-) 0 (-) >0.05
rs16855155 chr2:169087232 STK39 C - 10 A vs. G - 0.225 (A) >1 (-) 0 (-) >0.05
rs78109109 chr2:169152817 STK39 [+48166bp] C - 10 A vs. C 0.008 (A) - <1 (-) 0 (-) >0.05
rs6433031 chr2:168888003 STK39 C - 13 A vs. G - 0.258 (A) >1 (-) 0 (-) >0.05
rs10183957 chr2:169036301 STK39 C - 13 A vs. G 0.392 (A) 0.117 (A) <1 (-) 0 (-) >0.05
rs4668019 chr2:168966650 STK39 C - 13 T vs. C 0.217 (T) 0.275 (T) <1 (-) 19 (-) >0.05
rs10497335 chr2:168973417 STK39 C - 13 A vs. G 0.217 (A) 0.275 (A) <1 (-) 27 (-) >0.05
rs11681363 chr2:168901317 STK39 C - 13 T vs. C 0.467 (T) 0.267 (C) >1 (-) 0 (-) >0.05
rs10930305 chr2:168902709 STK39 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs836655 chr2:168766729 B3GALT1 [+36178bp] C - 13 T vs. G 0.117 (T) 0.35 (T) <1 (-) 16 (-) >0.05
rs10208532 chr2:168818426 STK39 C - 13 T vs. C 0.092 (T) 0.058 (T) >1 (-) 22 (-) >0.05
rs836654 chr2:168766697 B3GALT1 [+36146bp] C - 13 T vs. G 0.117 (G) 0.35 (G) >1 (-) 17 (-) >0.05
rs79287200 chr2:169068930 STK39 C - 12 T vs. C 0.017 (T) - >1 (-) 0 (-) >0.05
rs13382582 chr2:169079662 STK39 C - 13 C vs. G 0.425 (G) 0.117 (G) >1 (-) 0 (-) >0.05
rs140824416 chr2:169117323 STK39 [+12672bp] C - 10 A vs. G - - >1 (-) 0 (-) >0.05
rs6719629 chr2:168819237 STK39 C - 13 T vs. G 0.425 (G) 0.067 (G) >1 (-) 0 (-) >0.05
rs1823293 chr2:168868847 STK39 C - 13 T vs. C 0.467 (T) 0.258 (T) >1 (-) 0 (-) >0.05
rs6735157 chr2:169008490 STK39 C - 13 A vs. G 0.3 (G) 0.258 (A) <1 (-) 4 (-) >0.05
rs4668029 chr2:169008965 STK39 C - 13 T vs. C 0.3 (C) 0.258 (T) <1 (-) 0 (-) >0.05
rs1517323 chr2:169096765 STK39 C - 13 T vs. C 0.267 (T) 0.075 (T) <1 (-) 0 (-) >0.05
rs151138598 chr2:169008236 STK39 C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs4667560 chr2:168971333 STK39 C - 13 T vs. C 0.217 (T) 0.275 (T) <1 (-) 21 (-) >0.05
rs10201928 chr2:168816526 STK39 C - 13 T vs. C 0.1 (T) 0.333 (T) >1 (-) 21 (-) >0.05
rs77717144 chr2:168901720 STK39 C - 13 T vs. G 0.025 (G) - <1 (-) 41 (-) >0.05
rs935634 chr2:168972157 STK39 C - 13 T vs. C 0.217 (C) 0.275 (C) >1 (-) 21 (-) >0.05
rs149115105 chr2:168930597 STK39 C - 3 T vs. G - - <1 (-) 0 (-) >0.05
rs6736753 chr2:168996401 STK39 C - 13 T vs. G 0.283 (T) 0.483 (T) >1 (-) 8 (-) >0.05
rs150665728 chr2:169004347 STK39 C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs72883966 chr2:168819345 STK39 C - 13 C vs. G 0.425 (C) 0.067 (C) <1 (-) 0 (-) >0.05
rs4667548 chr2:168886194 STK39 C - 13 C vs. G 0.467 (G) 0.483 (C) <1 (-) 0 (-) >0.05
rs141919154 chr2:169004214 STK39 C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs7598658 chr2:169031162 STK39 C - 13 T vs. G 0.383 (T) 0.1 (T) <1 (-) 0 (-) >0.05
rs79763779 chr2:168997006 STK39 C - 7 T vs. C 0.025 (T) - <1 (-) 0 (-) >0.05
rs141499687 chr2:168964555 STK39 C - 12 C vs. G - - <1 (-) 0 (-) >0.05
rs141629141 chr2:169149799 STK39 [+45148bp] C - 7 A vs. G - - >1 (-) 0 (-) >0.05
rs6711810 chr2:168967251 STK39 C - 13 A vs. G 0.008 (G) 0.067 (G) >1 (-) 0 (-) >0.05
rs10930308 chr2:169017436 STK39 C - 13 A vs. G 0.375 (A) 0.092 (A) <1 (-) 0 (-) >0.05
rs4668002 chr2:168892954 STK39 C - 13 T vs. C 0.35 (T) 0.483 (C) >1 (-) 0 (-) >0.05
rs10211182 chr2:168818673 STK39 C - 13 C vs. G 0.092 (C) 0.058 (C) >1 (-) 24 (-) >0.05
rs6728524 chr2:169089390 STK39 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs144139967 chr2:169045031 STK39 C - 5 A vs. G - - >1 (-) 0 (-) >0.05
rs113127030 chr2:169147479 STK39 [+42828bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs3821 chr2:168815992 STK39 C - 13 T vs. C 0.408 (C) 0.05 (C) >1 (-) 0 (-) >0.05
rs13390079 chr2:168926631 STK39 C - 13 A vs. C 0.333 (C) 0.25 (C) <1 (-) 0 (-) >0.05
rs3769405 chr2:168998401 STK39 C - 13 A vs. G 0.283 (G) 0.25 (A) <1 (-) 18 (-) >0.05
rs11686543 chr2:168899363 STK39 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs4392219 chr2:169068415 STK39 C - 13 A vs. G 0.267 (G) 0.2 (A) <1 (-) 0 (-) >0.05
rs3769420 chr2:168922596 STK39 C - 13 A vs. T 0.342 (T) 0.258 (T) <1 (-) 0 (-) >0.05

Association studies for this region [+]