STK39, chr2:168810530-169104651 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1955337 chr2:169129145 STK39 [+24494bp] All: C 120,238 21 T vs. G 0.083 (T) 0.317 (T) 1.21 (1.16-1.26) 17 (0-51) 1.67e-20
Meta_image?name=rs1955337

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs113454816 chr2:168839942 STK39 C - 13 T vs. C - - <1 (-) 11 (-) >0.05
rs10930300 chr2:168838628 STK39 C - 13 T vs. C 0.125 (T) 0.392 (T) <1 (-) 11 (-) >0.05
rs140797267 chr2:169152517 STK39 [+47866bp] C - 3 T vs. C - - >1 (-) 0 (-) >0.05
rs144679452 chr2:168803768 STK39 [-6762bp] C - 12 A vs. G - - >1 (-) 35 (-) >0.05
rs149953047 chr2:168977324 STK39 C - 4 T vs. C - - <1 (-) 0 (-) >0.05
rs115292050 chr2:169103028 STK39 C - 12 A vs. G - - <1 (-) 17 (-) >0.05
rs12479070 chr2:168912084 STK39 C - 13 A vs. G - 0.225 (G) <1 (-) 0 (-) >0.05
rs145762132 chr2:168799842 STK39 [-10688bp] C - 12 A vs. G - - >1 (-) 37 (-) >0.05
rs74331475 chr2:169107007 STK39 [+2356bp] C - 13 A vs. G 0.133 (A) - <1 (-) 0 (-) >0.05
rs10206968 chr2:169153809 STK39 [+49158bp] C - 5 T vs. C - - <1 (-) 0 (-) >0.05
rs3213942 chr2:168821469 STK39 C - 12 T vs. C - 0.25 (C) <1 (-) 0 (-) >0.05
rs73013478 chr2:169103143 STK39 C - 13 T vs. C 0.142 (T) 0.2 (T) <1 (-) 0 (-) >0.05
rs66647948 chr2:168848293 STK39 C - 13 T vs. C 0.125 (C) 0.442 (C) >1 (-) 11 (-) >0.05
chr2:168899386 chr2:168899386 STK39 C - 10 T vs. C - - <1 (-) 0 (-) >0.05
rs4667553 chr2:168932644 STK39 C - 13 T vs. G - 0.233 (T) >1 (-) 0 (-) >0.05
rs735893 chr2:168846236 STK39 C - 13 T vs. C 0.117 (C) 0.442 (C) >1 (-) 9 (-) >0.05
rs75451725 chr2:168857776 STK39 C - 13 T vs. C - 0.25 (T) >1 (-) 0 (-) >0.05
rs3739115 chr2:168931610 STK39 C - 13 A vs. G 0.017 (A) 0.233 (A) >1 (-) 0 (-) >0.05
rs6727157 chr2:169064032 STK39 C - 9 T vs. G 0.008 (T) 0.25 (T) <1 (-) 0 (-) >0.05
rs80288873 chr2:168850312 STK39 C - 13 T vs. C 0.033 (T) - >1 (-) 50 (-) >0.05
rs1823294 chr2:168868869 STK39 C - 13 C vs. G - 0.25 (C) >1 (-) 0 (-) >0.05
rs78230662 chr2:169063038 STK39 C - 9 T vs. C 0.008 (T) 0.217 (T) <1 (-) 0 (-) >0.05
rs935381 chr2:168824134 STK39 C - 13 T vs. C 0.225 (T) 0.275 (C) >1 (-) 40 (-) >0.05
rs60247368 chr2:169062982 STK39 C - 9 T vs. C - 0.225 (T) <1 (-) 0 (-) >0.05
rs80166353 chr2:168867508 STK39 C - 13 A vs. C - 0.25 (C) <1 (-) 0 (-) >0.05
rs147346669 chr2:169092121 STK39 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs16855112 chr2:169058007 STK39 C - 9 A vs. G - 0.258 (A) <1 (-) 0 (-) >0.05
rs76599421 chr2:168865815 STK39 C - 13 T vs. G - 0.25 (T) >1 (-) 0 (-) >0.05
rs11681470 chr2:168992610 STK39 C - 6 A vs. G 0.033 (G) - >1 (-) 51 (-) >0.05
rs6747978 chr2:169056756 STK39 C - 9 A vs. C - 0.25 (C) >1 (-) 0 (-) >0.05
rs1878486 chr2:169040198 STK39 C - 9 T vs. C - 0.233 (C) >1 (-) 0 (-) >0.05
rs1878487 chr2:169039839 STK39 C - 9 A vs. C 0.008 (A) 0.242 (A) <1 (-) 0 (-) >0.05
rs59681820 chr2:169053696 STK39 C - 9 A vs. C 0.008 (C) 0.25 (C) >1 (-) 0 (-) >0.05
rs11898447 chr2:169040419 STK39 C - 9 T vs. C 0.008 (T) 0.242 (T) <1 (-) 0 (-) >0.05
rs11894511 chr2:168984819 STK39 C - 12 A vs. G - - >1 (-) 21 (-) >0.05
rs142945818 chr2:168761757 B3GALT1 [+31206bp] C - 4 C vs. G - - >1 (-) 0 (-) >0.05
rs116165623 chr2:168785526 STK39 [-25004bp] C - 3 T vs. C 0.008 (T) - <1 (-) 0 (-) >0.05
rs16855199 chr2:169124263 STK39 [+19612bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs11898923 chr2:169042011 STK39 C - 9 A vs. T - 0.242 (A) <1 (-) 0 (-) >0.05
rs80352200 chr2:168901157 STK39 C - 13 T vs. C - 0.258 (C) <1 (-) 0 (-) >0.05
rs77318559 chr2:168901244 STK39 C - 13 A vs. G 0.008 (A) 0.25 (A) >1 (-) 0 (-) >0.05
rs6433029 chr2:168875512 STK39 C - 13 T vs. C 0.017 (C) 0.258 (C) <1 (-) 0 (-) >0.05
rs149551873 chr2:169046616 STK39 C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs4549047 chr2:168875834 STK39 C - 13 T vs. C 0.017 (C) 0.258 (C) <1 (-) 0 (-) >0.05
rs4271738 chr2:168875803 STK39 C - 13 C vs. G 0.017 (C) 0.242 (C) >1 (-) 0 (-) >0.05
rs4368297 chr2:168875696 STK39 C - 13 A vs. G 0.017 (A) 0.258 (A) >1 (-) 0 (-) >0.05
rs4668006 chr2:168894605 STK39 C - 13 A vs. T 0.333 (T) 0.042 (T) >1 (-) 0 (-) >0.05
rs79532398 chr2:168964003 STK39 C - 13 C vs. G 0.008 (G) 0.067 (G) <1 (-) 0 (-) >0.05
rs7597077 chr2:168873950 STK39 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs77545967 chr2:168876093 STK39 C - 13 T vs. C - 0.258 (T) >1 (-) 0 (-) >0.05

Association studies for this region [+]