TCN2, chr22:31002825-31023265 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs115242055 chr22:31052274 SLC35E4 C - 13 T vs. C 0.017 (C) 0.225 (C) <1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs42942 chr22:30977353 PES1 C - 13 A vs. T 0.033 (A) - <1 (-) 31 (-) >0.05
rs146560777 chr22:30955296 GAL3ST1 C - 10 T vs. C - - >1 (-) 11 (-) >0.05
rs16988810 chr22:30989061 PES1 C - 13 A vs. T 0.142 (A) - <1 (-) 14 (-) >0.05
rs16988803 chr22:30987960 PES1 C - 13 T vs. C 0.142 (T) - <1 (-) 14 (-) >0.05
rs16988814 chr22:30989918 PES1 C - 13 C vs. G 0.142 (C) - <1 (-) 15 (-) >0.05
rs1807691 chr22:31046315 SLC35E4 C - 13 A vs. G - - >1 (-) 31 (-) >0.05
rs17526668 chr22:30987933 PES1 C - 13 A vs. T 0.142 (A) - <1 (-) 14 (-) >0.05
rs78165775 chr22:30956790 GAL3ST1 C - 9 A vs. G - - <1 (-) 0 (-) >0.05
rs139730114 chr22:31061383 SLC35E4 C - 12 T vs. C - - >1 (-) 5 (-) >0.05
rs5994319 chr22:30955094 GAL3ST1 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs11913547 chr22:30994633 PES1 C - 13 A vs. G 0.142 (G) - <1 (-) 0 (-) >0.05
rs9609019 chr22:31016082 TCN2 C - 11 A vs. G 0.067 (A) 0.017 (A) >1 (-) 0 (-) >0.05
rs7286285 chr22:30953885 GAL3ST1 C - 7 A vs. G - - <1 (-) 0 (-) >0.05
rs73881484 chr22:30985646 PES1 C - 13 A vs. G 0.133 (A) 0.008 (A) <1 (-) 25 (-) >0.05
rs79182040 chr22:31063641 SLC35E4 C - 13 T vs. C 0.125 (C) - >1 (-) 10 (-) >0.05
rs34236034 chr22:30994820 PES1 C - 13 A vs. G 0.142 (A) - <1 (-) 17 (-) >0.05
rs12484495 chr22:30988518 PES1 C - 13 T vs. G - - <1 (-) 14 (-) >0.05
rs11913206 chr22:30989329 PES1 C - 13 C vs. G - - >1 (-) 15 (-) >0.05
rs112143191 chr22:30994185 PES1 C - 13 T vs. G 0.142 (G) - >1 (-) 16 (-) >0.05
rs35908001 chr22:30956122 GAL3ST1 C - 13 T vs. C 0.067 (T) - <1 (-) 22 (-) >0.05
rs138676243 chr22:30995335 PES1 C - 9 A vs. G - - >1 (-) 0 (-) >0.05
rs12169610 chr22:31022590 TCN2 C - 13 T vs. C 0.075 (T) - >1 (-) 18 (-) >0.05
rs9606758 chr22:31024193 TCN2 [+928bp] C - 11 T vs. C 0.042 (C) - <1 (-) 0 (-) >0.05
rs9606757 chr22:31016645 TCN2 C - 11 A vs. G 0.042 (G) - <1 (-) 0 (-) >0.05
rs141145686 chr22:31029471 SLC35E4 [-2168bp] C - 4 T vs. C - - >1 (-) 31 (-) >0.05
rs117156758 chr22:30968752 GAL3ST1 C - 10 T vs. G 0.017 (T) - <1 (-) 0 (-) >0.05
rs9609033 chr22:31047681 SLC35E4 C - 12 A vs. G 0.042 (A) - >1 (-) 0 (-) >0.05
rs78289485 chr22:31068253 SLC35E4 [+3250bp] C - 4 T vs. G 0.008 (T) - <1 (-) 19 (-) >0.05
rs12484250 chr22:30966766 GAL3ST1 C - 13 A vs. T - - >1 (-) 0 (-) >0.05
rs45624233 chr22:31011711 TCN2 C - 7 T vs. C - - <1 (-) 0 (-) >0.05
rs143029449 chr22:31003075 TCN2 C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs11914005 chr22:30992021 PES1 C - 13 A vs. G 0.142 (A) - <1 (-) 14 (-) >0.05
rs13054000 chr22:30973965 PES1 C - 13 C vs. G 0.075 (C) - <1 (-) 9 (-) >0.05
rs42941 chr22:30970972 GAL3ST1 [+398bp] C - 13 A vs. C 0.35 (C) 0.167 (C) <1 (-) 19 (-) >0.05
rs9609030 chr22:31044465 SLC35E4 C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs73881482 chr22:30971606 PES1 [-1006bp] C - 13 A vs. G 0.075 (A) - >1 (-) 0 (-) >0.05
rs11914168 chr22:30992262 PES1 C - 13 T vs. G 0.15 (G) - >1 (-) 14 (-) >0.05
rs5997729 chr22:31057177 SLC35E4 C - 12 T vs. C 0.05 (T) - >1 (-) 0 (-) >0.05
rs5994330 chr22:31051451 SLC35E4 C - 12 A vs. C 0.042 (C) - <1 (-) 0 (-) >0.05
rs9606763 chr22:31062157 SLC35E4 C - 12 T vs. C 0.042 (C) - <1 (-) 0 (-) >0.05
rs138426988 chr22:31029046 SLC35E4 [-2593bp] C - 11 A vs. G - - <1 (-) 1 (-) >0.05
rs2078973 chr22:31048534 SLC35E4 C - 13 T vs. C 0.483 (T) 0.175 (T) >1 (-) 0 (-) >0.05
rs12628608 chr22:30955907 GAL3ST1 C - 6 A vs. G 0.008 (A) 0.117 (A) >1 (-) 0 (-) >0.05
rs112410786 chr22:30953527 GAL3ST1 C - 12 A vs. G 0.008 (A) - <1 (-) 13 (-) >0.05
rs41282481 chr22:30973268 PES1 C - 5 A vs. G 0.017 (A) - <1 (-) 38 (-) >0.05
rs9609028 chr22:31042233 SLC35E4 C - 12 A vs. G 0.042 (G) - <1 (-) 0 (-) >0.05
rs5997724 chr22:31050502 SLC35E4 C - 12 T vs. C 0.05 (C) - <1 (-) 0 (-) >0.05
rs11912660 chr22:30972409 PES1 [-203bp] C - 13 T vs. C 0.042 (C) - <1 (-) 0 (-) >0.05
rs12484688 chr22:30991139 PES1 C - 13 T vs. G 0.142 (T) - <1 (-) 22 (-) >0.05
rs72558388 chr22:31018572 TCN2 C - 13 A vs. G - - >1 (-) 12 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.