TCN2, chr22:31002825-31023265 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs115242055 chr22:31052274 SLC35E4 C - 13 T vs. C 0.017 (C) 0.225 (C) <1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9609038 chr22:31058394 SLC35E4 C - 12 C vs. G 0.042 (C) - >1 (-) 0 (-) >0.05
rs55674628 chr22:30953280 GAL3ST1 C - 12 T vs. C 0.008 (T) - <1 (-) 4 (-) >0.05
rs35838082 chr22:31011350 TCN2 C - 11 T vs. C - - <1 (-) 0 (-) >0.05
rs150766334 chr22:30954211 GAL3ST1 C - 5 A vs. C - - <1 (-) 0 (-) >0.05
rs75641972 chr22:30992065 PES1 C - 13 T vs. G 0.075 (T) - >1 (-) 0 (-) >0.05
rs9609006 chr22:30993365 PES1 C - 10 A vs. G - - >1 (-) 27 (-) >0.05
rs141971917 chr22:31036411 SLC35E4 C - 10 C vs. G - - <1 (-) 0 (-) >0.05
rs4820869 chr22:30986565 PES1 C - 13 A vs. G 0.142 (G) 0.008 (G) >1 (-) 23 (-) >0.05
rs9609025 chr22:31032076 SLC35E4 C - 12 A vs. G 0.042 (A) - >1 (-) 0 (-) >0.05
rs148129737 chr22:31057481 SLC35E4 C - 8 C vs. G - - >1 (-) 22 (-) >0.05
rs112457062 chr22:31030138 SLC35E4 [-1501bp] C - 10 A vs. G - - <1 (-) 0 (-) >0.05
rs143986712 chr22:30997004 PES1 C - 10 C vs. G - - >1 (-) 0 (-) >0.05
rs148792189 chr22:31022153 TCN2 C - 10 T vs. C - - <1 (-) 0 (-) >0.05
chr22:31021810 chr22:31021810 TCN2 C - 10 C vs. G - - >1 (-) 0 (-) >0.05
rs142315240 chr22:30998295 PES1 C - 10 T vs. C - - >1 (-) 0 (-) >0.05
rs11912888 chr22:30993463 PES1 C - 5 A vs. G - - <1 (-) 0 (-) >0.05
rs140004888 chr22:31016246 TCN2 C - 11 T vs. C - - <1 (-) 0 (-) >0.05
rs16988828 chr22:31003561 TCN2 C - 13 A vs. G 0.058 (G) 0.042 (G) <1 (-) 2 (-) >0.05
chr22:31072050 chr22:31072050 SLC35E4 [+7047bp] C - 9 A vs. T - - >1 (-) 0 (-) >0.05
rs117753988 chr22:31070132 SLC35E4 [+5129bp] C - 13 A vs. G 0.017 (A) - <1 (-) 0 (-) >0.05
rs8630 chr22:31058115 SLC35E4 C - 13 A vs. G 0.358 (G) 0.192 (G) >1 (-) 0 (-) >0.05
rs145500781 chr22:31017736 TCN2 C - 10 T vs. G - - <1 (-) 0 (-) >0.05
rs140760065 chr22:31017368 TCN2 C - 10 A vs. T - - >1 (-) 0 (-) >0.05
rs146274277 chr22:31016101 TCN2 C - 10 A vs. G - - <1 (-) 0 (-) >0.05
rs5753220 chr22:30986350 PES1 C - 13 T vs. C 0.275 (C) 0.483 (C) >1 (-) 11 (-) >0.05
rs72550762 chr22:31017319 TCN2 C - 10 A vs. C - - >1 (-) 0 (-) >0.05
rs12484511 chr22:30988762 PES1 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs112822423 chr22:30981075 PES1 C - 13 A vs. G - - >1 (-) 2 (-) >0.05
rs4149491 chr22:30953502 GAL3ST1 C - 13 T vs. G 0.025 (T) 0.133 (T) <1 (-) 0 (-) >0.05
rs42928 chr22:30955321 GAL3ST1 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs4820874 chr22:30992617 PES1 C - 13 A vs. G 0.133 (G) - >1 (-) 4 (-) >0.05
rs11912540 chr22:30993265 PES1 C - 13 T vs. C 0.142 (C) - >1 (-) 0 (-) >0.05
rs9609027 chr22:31041839 SLC35E4 C - 6 A vs. G - - <1 (-) 0 (-) >0.05
rs4820017 chr22:30981508 PES1 C - 13 A vs. G 0.075 (G) - <1 (-) 0 (-) >0.05
rs1076301 chr22:31044831 SLC35E4 C - 13 A vs. G 0.3 (G) 0.408 (G) <1 (-) 0 (-) >0.05
rs55844758 chr22:31034084 SLC35E4 C - 13 A vs. G 0.083 (G) 0.2 (G) >1 (-) 26 (-) >0.05
rs11912792 chr22:31063832 SLC35E4 C - 13 A vs. G 0.158 (A) - <1 (-) 8 (-) >0.05
rs142344365 chr22:31002194 PES1 C - 10 A vs. T - - >1 (-) 0 (-) >0.05
rs117112776 chr22:31053572 SLC35E4 C - 13 A vs. G 0.067 (A) 0.117 (A) >1 (-) 0 (-) >0.05
rs4820877 chr22:30992805 PES1 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs5753267 chr22:31057115 SLC35E4 C - 13 A vs. G 0.35 (A) - <1 (-) 0 (-) >0.05
rs5994332 chr22:31067243 SLC35E4 [+2240bp] C - 13 T vs. C 0.167 (T) 0.008 (T) >1 (-) 0 (-) >0.05
rs11704774 chr22:30961184 GAL3ST1 C - 13 A vs. T 0.05 (A) - >1 (-) 19 (-) >0.05
rs148180945 chr22:30984485 PES1 C - 13 T vs. C - - <1 (-) 51 (-) >0.05
rs73881479 chr22:30961552 GAL3ST1 C - 13 T vs. C 0.033 (T) - >1 (-) 0 (-) >0.05
rs77517564 chr22:31021353 TCN2 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs5994324 chr22:31008442 TCN2 C - 12 T vs. C - - <1 (-) 16 (-) >0.05
rs79711084 chr22:31008793 TCN2 C - 12 A vs. G - - <1 (-) 16 (-) >0.05
rs148704267 chr22:30961157 GAL3ST1 C - 6 T vs. C - - <1 (-) 37 (-) >0.05
rs112346144 chr22:30953012 GAL3ST1 C - 12 A vs. G 0.017 (A) - <1 (-) 6 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.