TCN2, chr22:31002825-31023265 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs115242055 chr22:31052274 SLC35E4 C - 13 T vs. C 0.017 (C) 0.225 (C) <1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs140043016 chr22:30994023 PES1 C - 13 A vs. T - - >1 (-) 25 (-) >0.05
rs4820885 chr22:31012756 TCN2 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs12157809 chr22:31027500 SLC35E4 [-4139bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs117005270 chr22:31014006 TCN2 C - 12 T vs. C 0.025 (T) - <1 (-) 25 (-) >0.05
rs79813181 chr22:31052970 SLC35E4 C - 10 A vs. T 0.017 (T) 0.233 (T) <1 (-) 0 (-) >0.05
rs4820884 chr22:31008436 TCN2 C - 13 A vs. C - - <1 (-) 0 (-) >0.05
rs4820020 chr22:31006004 TCN2 C - 13 T vs. C 0.033 (T) - <1 (-) 0 (-) >0.05
rs5749146 chr22:31025552 TCN2 [+2287bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs111808252 chr22:31014572 TCN2 C - 11 A vs. G - 0.183 (A) >1 (-) 0 (-) >0.05
rs4820880 chr22:31005244 TCN2 C - 13 A vs. C 0.033 (A) - <1 (-) 0 (-) >0.05
rs8138797 chr22:31044286 SLC35E4 C - 12 A vs. G 0.025 (A) - <1 (-) 41 (-) >0.05
rs5997702 chr22:31004828 TCN2 C - 13 C vs. G 0.033 (G) - >1 (-) 0 (-) >0.05
rs35157781 chr22:30975053 PES1 C - 4 C vs. G 0.025 (G) - <1 (-) 0 (-) >0.05
rs2528456 chr22:30964903 GAL3ST1 C - 13 A vs. G - - <1 (-) 33 (-) >0.05
rs4820023 chr22:31030781 SLC35E4 [-858bp] C - 13 T vs. C 0.467 (T) 0.442 (T) >1 (-) 0 (-) >0.05
rs112812772 chr22:31004597 TCN2 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs145097815 chr22:31008462 TCN2 C - 13 T vs. G - - <1 (-) 20 (-) >0.05
rs3179442 chr22:31043766 SLC35E4 C - 13 A vs. G 0.483 (A) 0.417 (A) >1 (-) 0 (-) >0.05
rs76670767 chr22:31007371 TCN2 C - 13 T vs. C 0.033 (C) - >1 (-) 20 (-) >0.05
rs2072196 chr22:30975513 PES1 C - 13 T vs. C 0.3 (T) 0.308 (T) >1 (-) 0 (-) >0.05
rs35915865 chr22:31008867 TCN2 C - 13 T vs. C 0.033 (C) - >1 (-) 20 (-) >0.05
rs80014130 chr22:31007238 TCN2 C - 13 T vs. G 0.017 (T) - <1 (-) 20 (-) >0.05
rs77763564 chr22:31006841 TCN2 C - 13 T vs. C 0.033 (T) - <1 (-) 20 (-) >0.05
rs4820881 chr22:31005250 TCN2 C - 13 A vs. G 0.033 (G) - >1 (-) 21 (-) >0.05
rs9621033 chr22:30972927 PES1 C - 13 C vs. G 0.033 (C) - >1 (-) 32 (-) >0.05
rs9606762 chr22:31058818 SLC35E4 C - 13 A vs. G 0.058 (G) 0.217 (G) <1 (-) 0 (-) >0.05
rs9606761 chr22:31058193 SLC35E4 C - 13 A vs. G 0.058 (G) 0.25 (G) <1 (-) 0 (-) >0.05
chr22:30971818 chr22:30971818 PES1 [-794bp] C - 6 T vs. C - - >1 (-) 0 (-) >0.05
rs13057869 chr22:31028344 SLC35E4 [-3295bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs115885797 chr22:30996195 PES1 C - 13 T vs. C - 0.1 (T) >1 (-) 0 (-) >0.05
rs12160098 chr22:31014419 TCN2 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs4820018 chr22:30986172 PES1 C - 13 A vs. G 0.158 (A) 0.233 (A) <1 (-) 0 (-) >0.05
rs9609043 chr22:31069614 SLC35E4 [+4611bp] C - 13 A vs. T 0.233 (A) - <1 (-) 42 (-) >0.05
rs5749128 chr22:30959026 GAL3ST1 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs143520606 chr22:31013153 TCN2 C - 13 T vs. C - - <1 (-) 22 (-) >0.05
rs116997758 chr22:30993836 PES1 C - 10 A vs. C 0.017 (A) - <1 (-) 9 (-) >0.05
rs42927 chr22:30953624 GAL3ST1 C - 4 A vs. G - - >1 (-) 0 (-) >0.05
rs12160394 chr22:31017717 TCN2 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs5753231 chr22:31003069 PES1 C - 13 T vs. C 0.217 (T) 0.142 (T) <1 (-) 0 (-) >0.05
rs78152117 chr22:30965698 GAL3ST1 C - 4 C vs. G 0.025 (G) - <1 (-) 0 (-) >0.05
rs138647649 chr22:30963992 GAL3ST1 C - 3 A vs. G - - <1 (-) 0 (-) >0.05
rs5753233 chr22:31006552 TCN2 C - 12 A vs. G - 0.183 (A) <1 (-) 24 (-) >0.05
rs116936358 chr22:30981100 PES1 C - 7 A vs. G 0.025 (A) - <1 (-) 0 (-) >0.05
rs5997694 chr22:30992834 PES1 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs5997707 chr22:31018124 TCN2 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs146338285 chr22:31056590 SLC35E4 C - 11 T vs. C - - <1 (-) 42 (-) >0.05
rs112032147 chr22:30990744 PES1 C - 5 T vs. C 0.05 (T) - <1 (-) 0 (-) >0.05
rs67384221 chr22:31029658 SLC35E4 [-1981bp] C - 13 A vs. G 0.2 (A) - >1 (-) 0 (-) >0.05
rs5749141 chr22:31023921 TCN2 [+656bp] C - 13 T vs. C 0.442 (T) 0.45 (C) <1 (-) 0 (-) >0.05
rs35765517 chr22:31043949 SLC35E4 C - 13 A vs. G 0.208 (G) - <1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.