TCN2, chr22:31002825-31023265 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs115242055 chr22:31052274 SLC35E4 C - 13 T vs. C 0.017 (C) 0.225 (C) <1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs13053923 chr22:30988382 PES1 C - 13 A vs. G 0.4 (A) 0.217 (A) >1 (-) 0 (-) >0.05
rs5749148 chr22:31030213 SLC35E4 [-1426bp] C - 13 T vs. C 0.467 (T) 0.167 (T) >1 (-) 0 (-) >0.05
rs117870155 chr22:31035621 SLC35E4 C - 13 A vs. G 0.033 (G) - >1 (-) 28 (-) >0.05
rs4820876 chr22:30992672 PES1 C - 13 A vs. G 0.433 (A) 0.242 (G) <1 (-) 0 (-) >0.05
rs140887157 chr22:30997325 PES1 C - 3 A vs. G - - >1 (-) 0 (-) >0.05
rs1544468 chr22:31023191 TCN2 C - 13 A vs. G 0.458 (G) 0.2 (G) <1 (-) 0 (-) >0.05
rs4820875 chr22:30992651 PES1 C - 13 A vs. G 0.425 (A) 0.242 (G) <1 (-) 0 (-) >0.05
rs5997692 chr22:30989400 PES1 C - 13 A vs. G - 0.233 (A) >1 (-) 0 (-) >0.05
rs5997704 chr22:31010649 TCN2 C - 13 T vs. C 0.45 (T) 0.45 (C) <1 (-) 0 (-) >0.05
rs9621042 chr22:30993791 PES1 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs76374911 chr22:31057132 SLC35E4 C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs5997687 chr22:30968349 GAL3ST1 C - 13 T vs. C 0.042 (T) - >1 (-) 0 (-) >0.05
rs147880847 chr22:31056876 SLC35E4 C - 12 T vs. G - - >1 (-) 0 (-) >0.05
rs142573534 chr22:31055190 SLC35E4 C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs4513384 chr22:31029242 SLC35E4 [-2397bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs4820871 chr22:30991519 PES1 C - 13 C vs. G - - >1 (-) 0 (-) >0.05
rs13056901 chr22:31028464 SLC35E4 [-3175bp] C - 13 C vs. G - - >1 (-) 0 (-) >0.05
rs4325855 chr22:31046447 SLC35E4 C - 13 T vs. C 0.167 (T) 0.075 (T) <1 (-) 9 (-) >0.05
rs13053941 chr22:31031694 SLC35E4 C - 13 T vs. G 0.492 (T) - >1 (-) 0 (-) >0.05
rs150489228 chr22:31036172 SLC35E4 C - 13 A vs. C - - <1 (-) 27 (-) >0.05
rs2009862 chr22:31014474 TCN2 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs5997711 chr22:31025863 TCN2 [+2598bp] C - 13 T vs. C 0.442 (T) 0.475 (C) <1 (-) 0 (-) >0.05
rs146457027 chr22:31053040 SLC35E4 C - 12 C vs. G - - <1 (-) 0 (-) >0.05
rs113330232 chr22:31029128 SLC35E4 [-2511bp] C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs4375972 chr22:31020152 TCN2 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs1971653 chr22:31023326 TCN2 [+61bp] C - 13 A vs. G 0.458 (A) 0.342 (G) <1 (-) 0 (-) >0.05
rs112424164 chr22:31031223 SLC35E4 [-416bp] C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs77353926 chr22:31037368 SLC35E4 C - 13 T vs. C 0.033 (C) - >1 (-) 27 (-) >0.05
rs4820891 chr22:31032309 SLC35E4 C - 13 T vs. C 0.467 (C) 0.45 (T) >1 (-) 0 (-) >0.05
rs7284161 chr22:31030839 SLC35E4 [-800bp] C - 12 A vs. C - - >1 (-) 0 (-) >0.05
rs77601687 chr22:30979328 PES1 C - 8 A vs. C 0.008 (C) - >1 (-) 10 (-) >0.05
rs62227016 chr22:30993079 PES1 C - 13 T vs. C 0.4 (T) 0.158 (T) >1 (-) 0 (-) >0.05
rs2072194 chr22:31022272 TCN2 C - 13 A vs. G 0.45 (G) 0.475 (A) >1 (-) 0 (-) >0.05
rs4340628 chr22:31029199 SLC35E4 [-2440bp] C - 13 T vs. G 0.342 (T) 0.175 (T) >1 (-) 0 (-) >0.05
rs113499672 chr22:31032213 SLC35E4 C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs147168080 chr22:31032836 SLC35E4 C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs112894042 chr22:30977183 PES1 C - 13 T vs. C 0.025 (T) - <1 (-) 26 (-) >0.05
rs10439913 chr22:31015938 TCN2 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs5753250 chr22:31020113 TCN2 C - 13 A vs. G 0.458 (G) - >1 (-) 0 (-) >0.05
rs60387370 chr22:31038892 SLC35E4 C - 13 T vs. C - - <1 (-) 27 (-) >0.05
rs146068661 chr22:31039915 SLC35E4 C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs16988925 chr22:31040405 SLC35E4 C - 13 T vs. G 0.033 (T) - <1 (-) 27 (-) >0.05
rs145748903 chr22:31041369 SLC35E4 C - 13 A vs. G - - <1 (-) 27 (-) >0.05
rs67153574 chr22:31061283 SLC35E4 C - 13 T vs. C 0.017 (T) 0.175 (T) <1 (-) 50 (-) >0.05
rs148440260 chr22:31027568 SLC35E4 [-4071bp] C - 9 T vs. C - - >1 (-) 0 (-) >0.05
rs146037057 chr22:30992955 PES1 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs2270013 chr22:31042352 SLC35E4 C - 13 A vs. G 0.45 (G) 0.458 (A) >1 (-) 0 (-) >0.05
rs5749149 chr22:31034982 SLC35E4 C - 13 A vs. G 0.45 (A) - <1 (-) 0 (-) >0.05
rs143510585 chr22:30957608 GAL3ST1 C - 4 T vs. C - - >1 (-) 0 (-) >0.05
rs79483185 chr22:30980914 PES1 C - 13 T vs. C 0.05 (T) - >1 (-) 51 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.