TCN2, chr22:31002825-31023265 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs115242055 chr22:31052274 SLC35E4 C - 13 T vs. C 0.017 (C) 0.225 (C) <1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs117493528 chr22:31037572 SLC35E4 C - 13 A vs. G 0.033 (A) - >1 (-) 0 (-) >0.05
rs118153100 chr22:31038706 SLC35E4 C - 13 A vs. G 0.008 (A) - >1 (-) 0 (-) >0.05
rs9609041 chr22:31066406 SLC35E4 [+1403bp] C - 13 T vs. C 0.5 (T) 0.042 (C) >1 (-) 0 (-) >0.05
rs5753235 chr22:31009377 TCN2 C - 13 T vs. C - - >1 (-) 13 (-) >0.05
rs1981590 chr22:31038949 SLC35E4 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs2007846 chr22:31065067 SLC35E4 [+64bp] C - 13 T vs. C 0.475 (C) 0.042 (T) <1 (-) 0 (-) >0.05
rs148110364 chr22:30976482 PES1 C - 6 T vs. C - - >1 (-) 17 (-) >0.05
rs713853 chr22:31061869 SLC35E4 C - 13 T vs. C 0.442 (T) 0.425 (T) >1 (-) 0 (-) >0.05
rs714014 chr22:31067801 SLC35E4 [+2798bp] C - 13 T vs. C 0.5 (T) - >1 (-) 0 (-) >0.05
rs13433541 chr22:31024375 TCN2 [+1110bp] C - 13 A vs. C 0.05 (A) 0.208 (A) >1 (-) 9 (-) >0.05
rs9621051 chr22:31024553 TCN2 [+1288bp] C - 13 C vs. G 0.05 (G) 0.217 (G) <1 (-) 9 (-) >0.05
rs12159084 chr22:31029031 SLC35E4 [-2608bp] C - 10 A vs. G - - <1 (-) 0 (-) >0.05
rs9621039 chr22:30990141 PES1 C - 3 A vs. G 0.017 (G) - <1 (-) 27 (-) >0.05
rs34123894 chr22:30975861 PES1 C - 7 T vs. C - 0.208 (T) >1 (-) 0 (-) >0.05
rs5994328 chr22:31046587 SLC35E4 C - 13 T vs. C 0.45 (T) 0.475 (C) <1 (-) 0 (-) >0.05
rs2028080 chr22:31065332 SLC35E4 [+329bp] C - 13 C vs. G 0.5 (C) 0.033 (G) >1 (-) 0 (-) >0.05
rs118085763 chr22:30981547 PES1 C - 13 A vs. G 0.017 (A) - >1 (-) 43 (-) >0.05
rs3827379 chr22:31063939 SLC35E4 C - 13 A vs. G 0.167 (A) - <1 (-) 40 (-) >0.05
rs9306264 chr22:31024934 TCN2 [+1669bp] C - 13 T vs. C 0.05 (T) 0.233 (T) >1 (-) 9 (-) >0.05
rs5997731 chr22:31062596 SLC35E4 C - 13 T vs. G - - <1 (-) 0 (-) >0.05
rs143895747 chr22:30999032 PES1 C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs5753263 chr22:31052568 SLC35E4 C - 13 T vs. G 0.233 (G) - <1 (-) 9 (-) >0.05
rs713856 chr22:31064305 SLC35E4 C - 13 C vs. G 0.025 (C) - <1 (-) 37 (-) >0.05
rs138332566 chr22:30998959 PES1 C - 8 A vs. G - - >1 (-) 11 (-) >0.05
rs5997715 chr22:31037602 SLC35E4 C - 13 A vs. G - 0.317 (G) <1 (-) 0 (-) >0.05
rs4820893 chr22:31060193 SLC35E4 C - 13 T vs. C 0.233 (C) 0.0 (C) <1 (-) 2 (-) >0.05
rs77548609 chr22:30958629 GAL3ST1 C - 13 T vs. C 0.058 (C) - <1 (-) 46 (-) >0.05
rs141308978 chr22:30995147 PES1 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs16988782 chr22:30960576 GAL3ST1 C - 13 T vs. C 0.042 (T) - >1 (-) 1 (-) >0.05
rs4820882 chr22:31005293 TCN2 C - 13 A vs. G 0.425 (G) 0.2 (A) >1 (-) 0 (-) >0.05
rs13058138 chr22:31002638 PES1 C - 13 A vs. G 0.083 (A) - >1 (-) 29 (-) >0.05
rs2078975 chr22:31048803 SLC35E4 C - 13 A vs. G 0.25 (A) 0.0 (A) >1 (-) 8 (-) >0.05
rs79598995 chr22:30982314 PES1 C - 10 A vs. G 0.008 (A) - >1 (-) 0 (-) >0.05
rs117490731 chr22:30958789 GAL3ST1 C - 12 T vs. C 0.008 (T) - >1 (-) 14 (-) >0.05
rs12485165 chr22:31020341 TCN2 C - 13 T vs. G - - >1 (-) 13 (-) >0.05
rs118120731 chr22:30955669 GAL3ST1 C - 12 T vs. C 0.033 (C) - >1 (-) 24 (-) >0.05
rs60815431 chr22:31025818 TCN2 [+2553bp] C - 13 A vs. G - - >1 (-) 42 (-) >0.05
rs1807507 chr22:31050162 SLC35E4 C - 13 T vs. C - - >1 (-) 8 (-) >0.05
rs5997685 chr22:30964810 GAL3ST1 C - 13 A vs. C - - <1 (-) 15 (-) >0.05
rs713904 chr22:31067582 SLC35E4 [+2579bp] C - 13 C vs. G 0.342 (C) 0.325 (C) >1 (-) 21 (-) >0.05
rs118121993 chr22:30964197 GAL3ST1 C - 12 A vs. G 0.025 (A) - <1 (-) 32 (-) >0.05
rs141821206 chr22:31016007 TCN2 C - 13 C vs. G - - >1 (-) 0 (-) >0.05
rs117582294 chr22:31011899 TCN2 C - 12 A vs. G 0.008 (A) - >1 (-) 7 (-) >0.05
rs740233 chr22:31007919 TCN2 C - 13 A vs. G 0.425 (G) 0.208 (G) <1 (-) 0 (-) >0.05
rs9609009 chr22:30993403 PES1 C - 7 T vs. C - - <1 (-) 46 (-) >0.05
rs42935 chr22:30962742 GAL3ST1 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs9609017 chr22:31004626 TCN2 C - 13 C vs. G 0.442 (G) 0.167 (C) >1 (-) 4 (-) >0.05
rs117324970 chr22:31004988 TCN2 C - 12 A vs. G 0.008 (A) - <1 (-) 0 (-) >0.05
rs5753265 chr22:31053641 SLC35E4 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs74523117 chr22:31060964 SLC35E4 C - 12 A vs. G 0.008 (A) - >1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.