TCN2, chr22:31002825-31023265 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs115242055 chr22:31052274 SLC35E4 C - 13 T vs. C 0.017 (C) 0.225 (C) <1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2079432 chr22:31035936 SLC35E4 C - 12 A vs. G 0.025 (A) - <1 (-) 0 (-) >0.05
rs56132790 chr22:31024094 TCN2 [+829bp] C - 13 T vs. C 0.292 (T) 0.192 (T) >1 (-) 0 (-) >0.05
rs76707711 chr22:30994661 PES1 C - 13 A vs. G 0.067 (A) - <1 (-) 42 (-) >0.05
rs2301958 chr22:31018884 TCN2 C - 13 C vs. G 0.283 (C) 0.175 (C) >1 (-) 0 (-) >0.05
rs137884088 chr22:31060182 SLC35E4 C - 8 A vs. T - - >1 (-) 0 (-) >0.05
rs9619123 chr22:30979432 PES1 C - 13 A vs. G 0.2 (A) - >1 (-) 0 (-) >0.05
rs13057127 chr22:31020975 TCN2 C - 13 A vs. C - - <1 (-) 0 (-) >0.05
rs117198872 chr22:31072666 SLC35E4 [+7663bp] C - 12 A vs. C 0.033 (A) - <1 (-) 24 (-) >0.05
rs8135187 chr22:31037491 SLC35E4 C - 9 T vs. G 0.017 (T) 0.017 (T) >1 (-) 0 (-) >0.05
rs6518711 chr22:31071354 SLC35E4 [+6351bp] C - 13 T vs. C 0.35 (T) 0.392 (T) >1 (-) 20 (-) >0.05
rs42929 chr22:30956419 GAL3ST1 C - 13 T vs. C 0.033 (T) - <1 (-) 0 (-) >0.05
rs79460277 chr22:31070718 SLC35E4 [+5715bp] C - 12 T vs. G 0.033 (T) - <1 (-) 23 (-) >0.05
rs145442357 chr22:31070562 SLC35E4 [+5559bp] C - 12 T vs. C - - >1 (-) 23 (-) >0.05
rs10418 chr22:31022952 TCN2 C - 13 T vs. C 0.3 (T) 0.175 (T) >1 (-) 0 (-) >0.05
rs5997696 chr22:30992961 PES1 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs117647925 chr22:31069557 SLC35E4 [+4554bp] C - 12 T vs. C 0.033 (C) - >1 (-) 23 (-) >0.05
rs4820019 chr22:30988433 PES1 C - 12 T vs. C 0.142 (C) - >1 (-) 12 (-) >0.05
rs116900836 chr22:31068544 SLC35E4 [+3541bp] C - 12 T vs. C 0.025 (C) - >1 (-) 22 (-) >0.05
rs138685210 chr22:30956078 GAL3ST1 C - 11 T vs. C - - <1 (-) 33 (-) >0.05
rs4149487 chr22:30958223 GAL3ST1 C - 12 A vs. G 0.033 (A) 0.117 (A) <1 (-) 0 (-) >0.05
rs4149488 chr22:30957832 GAL3ST1 C - 12 A vs. G 0.033 (G) 0.175 (G) >1 (-) 0 (-) >0.05
rs34524925 chr22:31062030 SLC35E4 C - 13 T vs. C 0.075 (C) - <1 (-) 0 (-) >0.05
rs11703570 chr22:31009118 TCN2 C - 13 A vs. T 0.3 (A) 0.208 (A) >1 (-) 0 (-) >0.05
rs7285863 chr22:30991124 PES1 C - 13 T vs. C 0.05 (T) - >1 (-) 0 (-) >0.05
rs112514152 chr22:30955440 GAL3ST1 C - 13 A vs. G - - >1 (-) 7 (-) >0.05
rs1974537 chr22:31027114 TCN2 [+3849bp] C - 13 C vs. G - - <1 (-) 30 (-) >0.05
rs60399532 chr22:30959074 GAL3ST1 C - 13 C vs. G - - >1 (-) 0 (-) >0.05
rs73881486 chr22:30996992 PES1 C - 13 C vs. G 0.067 (G) - >1 (-) 33 (-) >0.05
rs148039667 chr22:31038629 SLC35E4 C - 11 A vs. G - - >1 (-) 41 (-) >0.05
rs5994320 chr22:30960754 GAL3ST1 C - 13 C vs. G 0.158 (G) 0.017 (G) <1 (-) 0 (-) >0.05
rs77121106 chr22:30996190 PES1 C - 13 A vs. G 0.058 (G) - >1 (-) 36 (-) >0.05
rs145308917 chr22:31061506 SLC35E4 C - 12 C vs. G - - <1 (-) 0 (-) >0.05
rs76129606 chr22:31064811 SLC35E4 C - 12 A vs. G 0.025 (G) - >1 (-) 17 (-) >0.05
rs2267160 chr22:30952941 GAL3ST1 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs9621047 chr22:31004127 TCN2 C - 13 A vs. G 0.425 (A) 0.175 (A) >1 (-) 0 (-) >0.05
rs117228880 chr22:31039564 SLC35E4 C - 4 T vs. C 0.008 (T) - <1 (-) 0 (-) >0.05
rs73881485 chr22:30995460 PES1 C - 13 A vs. G 0.067 (A) - <1 (-) 36 (-) >0.05
rs11703133 chr22:31071711 SLC35E4 [+6708bp] C - 13 T vs. C 0.075 (T) - >1 (-) 0 (-) >0.05
rs7286054 chr22:31048995 SLC35E4 C - 13 T vs. C 0.1 (T) 0.167 (T) <1 (-) 0 (-) >0.05
rs147261606 chr22:30969051 GAL3ST1 C - 4 T vs. C - - <1 (-) 44 (-) >0.05
rs4820867 chr22:30962160 GAL3ST1 C - 13 A vs. G 0.058 (A) - <1 (-) 13 (-) >0.05
rs5749132 chr22:31005018 TCN2 C - 13 A vs. G 0.3 (G) 0.192 (G) <1 (-) 0 (-) >0.05
rs11912848 chr22:30993447 PES1 C - 10 A vs. G - - >1 (-) 23 (-) >0.05
rs34978834 chr22:31014999 TCN2 C - 13 T vs. C 0.117 (C) - <1 (-) 23 (-) >0.05
rs12168004 chr22:31029004 SLC35E4 [-2635bp] C - 13 T vs. C - - >1 (-) 6 (-) >0.05
rs5753229 chr22:31001109 PES1 C - 13 T vs. G 0.417 (T) 0.208 (G) <1 (-) 0 (-) >0.05
rs71331258 chr22:31070977 SLC35E4 [+5974bp] C - 13 T vs. C 0.05 (T) - >1 (-) 0 (-) >0.05
rs8142842 chr22:31067768 SLC35E4 [+2765bp] C - 13 A vs. G 0.075 (A) - >1 (-) 0 (-) >0.05
rs147656463 chr22:31052824 SLC35E4 C - 10 A vs. T - - >1 (-) 0 (-) >0.05
rs151080959 chr22:30987013 PES1 C - 3 T vs. C - - <1 (-) 72 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.