TCN2, chr22:31002825-31023265 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs115242055 chr22:31052274 SLC35E4 C - 13 T vs. C 0.017 (C) 0.225 (C) <1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs117063117 chr22:31069603 SLC35E4 [+4600bp] C - 13 A vs. T 0.058 (A) - >1 (-) 0 (-) >0.05
rs8142472 chr22:31067727 SLC35E4 [+2724bp] C - 13 T vs. C 0.075 (T) - >1 (-) 0 (-) >0.05
rs13056240 chr22:31012673 TCN2 C - 13 A vs. G 0.133 (G) - <1 (-) 24 (-) >0.05
rs76802001 chr22:31013399 TCN2 C - 12 A vs. G 0.008 (A) - <1 (-) 0 (-) >0.05
rs140808409 chr22:30975865 PES1 C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs76738533 chr22:31039733 SLC35E4 C - 12 A vs. G 0.033 (A) - >1 (-) 28 (-) >0.05
rs116987256 chr22:31050982 SLC35E4 C - 12 A vs. C 0.025 (A) 0.017 (A) >1 (-) 0 (-) >0.05
rs2003503 chr22:31044565 SLC35E4 C - 13 A vs. C - - <1 (-) 0 (-) >0.05
rs731990 chr22:31025154 TCN2 [+1889bp] C - 12 C vs. G 0.475 (C) 0.2 (C) >1 (-) 0 (-) >0.05
rs34779325 chr22:31064736 SLC35E4 C - 13 A vs. G 0.133 (G) - <1 (-) 0 (-) >0.05
rs117531294 chr22:31061521 SLC35E4 C - 13 A vs. G 0.008 (G) - <1 (-) 0 (-) >0.05
rs13053277 chr22:31066296 SLC35E4 [+1293bp] C - 13 T vs. C 0.083 (C) - <1 (-) 0 (-) >0.05
rs55866375 chr22:31023585 TCN2 [+320bp] C - 13 C vs. G 0.017 (G) - >1 (-) 49 (-) >0.05
rs140949621 chr22:30983639 PES1 C - 4 T vs. C - - <1 (-) 48 (-) >0.05
rs4343559 chr22:31024155 TCN2 [+890bp] C - 13 C vs. G 0.125 (C) - >1 (-) 25 (-) >0.05
rs75490016 chr22:31064020 SLC35E4 C - 13 A vs. G 0.133 (G) - <1 (-) 0 (-) >0.05
rs11914089 chr22:31035876 SLC35E4 C - 13 T vs. C 0.042 (T) - >1 (-) 32 (-) >0.05
rs5753230 chr22:31001988 PES1 C - 13 A vs. T 0.408 (T) 0.233 (A) >1 (-) 6 (-) >0.05
rs71331257 chr22:31066100 SLC35E4 [+1097bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs35137429 chr22:31069849 SLC35E4 [+4846bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs12159546 chr22:31070218 SLC35E4 [+5215bp] C - 13 A vs. G 0.058 (A) 0.025 (A) >1 (-) 40 (-) >0.05
rs2240433 chr22:31003138 TCN2 C - 13 A vs. G 0.408 (A) 0.217 (G) <1 (-) 6 (-) >0.05
rs12160073 chr22:31022635 TCN2 C - 13 T vs. C 0.117 (T) - >1 (-) 25 (-) >0.05
rs117021902 chr22:30992345 PES1 C - 12 A vs. G 0.008 (A) - <1 (-) 6 (-) >0.05
rs111970091 chr22:31038278 SLC35E4 C - 12 A vs. G 0.033 (A) - >1 (-) 32 (-) >0.05
rs62235877 chr22:31069744 SLC35E4 [+4741bp] C - 13 T vs. C - - >1 (-) 39 (-) >0.05
rs11703252 chr22:31071485 SLC35E4 [+6482bp] C - 13 T vs. C 0.075 (C) - <1 (-) 0 (-) >0.05
rs4820890 chr22:31019457 TCN2 C - 13 A vs. G 0.442 (G) 0.1 (G) <1 (-) 0 (-) >0.05
rs42931 chr22:30960412 GAL3ST1 C - 13 T vs. C 0.342 (C) 0.217 (C) <1 (-) 11 (-) >0.05
rs80102388 chr22:30960827 GAL3ST1 C - 6 C vs. G - 0.175 (C) >1 (-) 0 (-) >0.05
rs12628099 chr22:30967069 GAL3ST1 C - 6 A vs. G - 0.2 (G) <1 (-) 0 (-) >0.05
rs9609016 chr22:31000449 PES1 C - 11 A vs. G - - >1 (-) 0 (-) >0.05
rs5753247 chr22:31018225 TCN2 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs77283497 chr22:31037205 SLC35E4 C - 13 T vs. C 0.05 (T) - >1 (-) 5 (-) >0.05
rs42932 chr22:30961048 GAL3ST1 C - 13 T vs. C 0.35 (C) 0.217 (C) <1 (-) 13 (-) >0.05
rs5749131 chr22:31001822 PES1 C - 13 A vs. G 0.408 (A) 0.233 (G) <1 (-) 3 (-) >0.05
rs42938 chr22:30965757 GAL3ST1 C - 13 T vs. C 0.342 (C) 0.192 (C) <1 (-) 18 (-) >0.05
rs12168392 chr22:31022301 TCN2 C - 13 A vs. G 0.075 (A) - >1 (-) 10 (-) >0.05
chr22:31061079 chr22:31061079 SLC35E4 C - 3 A vs. G - - >1 (-) 0 (-) >0.05
rs740234 chr22:31008745 TCN2 C - 13 A vs. G 0.125 (G) - <1 (-) 12 (-) >0.05
rs9621044 chr22:30994918 PES1 C - 12 T vs. C - - >1 (-) 18 (-) >0.05
rs74797280 chr22:31063097 SLC35E4 C - 13 T vs. C 0.042 (C) - >1 (-) 0 (-) >0.05
rs41282549 chr22:31058707 SLC35E4 C - 13 A vs. G 0.042 (A) - >1 (-) 15 (-) >0.05
rs5753268 chr22:31060982 SLC35E4 C - 13 A vs. G 0.267 (A) 0.15 (A) <1 (-) 33 (-) >0.05
rs4820873 chr22:30992463 PES1 C - 13 T vs. C 0.158 (C) - >1 (-) 17 (-) >0.05
rs151309495 chr22:31035942 SLC35E4 C - 13 C vs. G - - >1 (-) 0 (-) >0.05
rs8138932 chr22:31037162 SLC35E4 C - 13 C vs. G 0.483 (G) 0.183 (C) >1 (-) 0 (-) >0.05
rs140180724 chr22:30993453 PES1 C - 13 A vs. G - - <1 (-) 34 (-) >0.05
rs9621049 chr22:31013419 TCN2 C - 13 T vs. C 0.075 (T) - >1 (-) 9 (-) >0.05
rs12159053 chr22:31028944 SLC35E4 [-2695bp] C - 13 A vs. G - - >1 (-) 29 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.