TCN2, chr22:31002825-31023265 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs115242055 chr22:31052274 SLC35E4 C - 13 T vs. C 0.017 (C) 0.225 (C) <1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs58963750 chr22:31015720 TCN2 C - 13 T vs. C 0.042 (T) - >1 (-) 9 (-) >0.05
rs4820886 chr22:31016539 TCN2 C - 13 T vs. G 0.075 (G) - <1 (-) 10 (-) >0.05
rs9621036 chr22:30983868 PES1 C - 13 T vs. C - - <1 (-) 38 (-) >0.05
rs150104118 chr22:30991617 PES1 C - 13 T vs. C - - >1 (-) 32 (-) >0.05
rs42939 chr22:30967184 GAL3ST1 C - 13 A vs. G 0.333 (G) - <1 (-) 20 (-) >0.05
rs149944363 chr22:31009524 TCN2 C - 4 T vs. C - - <1 (-) 46 (-) >0.05
rs4820022 chr22:31019448 TCN2 C - 11 T vs. G - - >1 (-) 0 (-) >0.05
rs116365548 chr22:31007520 TCN2 C - 9 T vs. C 0.025 (T) - <1 (-) 0 (-) >0.05
chr22:31073225 chr22:31073225 SLC35E4 [+8222bp] C - 11 T vs. C - - >1 (-) 33 (-) >0.05
rs5753272 chr22:31071045 SLC35E4 [+6042bp] C - 13 A vs. C 0.133 (C) 0.492 (A) <1 (-) 21 (-) >0.05
rs117334031 chr22:31069480 SLC35E4 [+4477bp] C - 13 A vs. G 0.025 (A) - <1 (-) 0 (-) >0.05
rs5997691 chr22:30980503 PES1 C - 13 C vs. G 0.067 (C) - >1 (-) 0 (-) >0.05
rs117690957 chr22:31068865 SLC35E4 [+3862bp] C - 13 T vs. C 0.017 (C) - >1 (-) 0 (-) >0.05
rs5753246 chr22:31017777 TCN2 C - 13 T vs. C 0.45 (C) 0.158 (C) <1 (-) 0 (-) >0.05
rs5749151 chr22:31063100 SLC35E4 C - 13 A vs. T 0.208 (A) 0.342 (T) <1 (-) 0 (-) >0.05
rs5753274 chr22:31072753 SLC35E4 [+7750bp] C - 13 A vs. G - - <1 (-) 10 (-) >0.05
rs111340628 chr22:30976521 PES1 C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs12627772 chr22:30956994 GAL3ST1 C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs12169435 chr22:31013789 TCN2 C - 13 T vs. C 0.008 (T) - <1 (-) 52 (-) >0.05
rs9619126 chr22:31007292 TCN2 C - 13 A vs. G 0.017 (G) - >1 (-) 51 (-) >0.05
rs42934 chr22:30962206 GAL3ST1 C - 13 T vs. C 0.125 (C) - <1 (-) 0 (-) >0.05
rs2057952 chr22:30994191 PES1 C - 10 T vs. G 0.017 (G) - <1 (-) 35 (-) >0.05
rs140407673 chr22:31021689 TCN2 C - 9 T vs. G - - <1 (-) 0 (-) >0.05
rs16988790 chr22:30964428 GAL3ST1 C - 6 C vs. G - 0.15 (C) >1 (-) 0 (-) >0.05
rs117051272 chr22:31005220 TCN2 C - 9 A vs. G 0.017 (A) - <1 (-) 13 (-) >0.05
rs12484655 chr22:30991134 PES1 C - 12 A vs. G 0.033 (G) - >1 (-) 0 (-) >0.05
rs76057170 chr22:30968972 GAL3ST1 C - 6 T vs. C - 0.2 (T) >1 (-) 0 (-) >0.05
rs114862865 chr22:30967225 GAL3ST1 C - 6 A vs. G - 0.183 (A) >1 (-) 0 (-) >0.05
rs9609018 chr22:31004632 TCN2 C - 12 T vs. C 0.033 (T) - >1 (-) 0 (-) >0.05
rs5753271 chr22:31070493 SLC35E4 [+5490bp] C - 13 T vs. C 0.133 (T) 0.467 (C) >1 (-) 15 (-) >0.05
rs28704032 chr22:31003454 TCN2 C - 11 A vs. G 0.042 (G) - <1 (-) 0 (-) >0.05
rs145063956 chr22:30980183 PES1 C - 10 A vs. G - - >1 (-) 0 (-) >0.05
rs72558392 chr22:31022262 TCN2 C - 13 T vs. G - - >1 (-) 0 (-) >0.05
rs145566570 chr22:31045201 SLC35E4 C - 11 A vs. G - - >1 (-) 0 (-) >0.05
rs2267161 chr22:30953295 GAL3ST1 C - 12 T vs. C 0.375 (T) 0.358 (T) <1 (-) 0 (-) >0.05
rs55846646 chr22:31042592 SLC35E4 C - 13 A vs. G 0.042 (A) - <1 (-) 0 (-) >0.05
rs79435691 chr22:30954071 GAL3ST1 C - 13 A vs. G 0.167 (A) - >1 (-) 0 (-) >0.05
rs5753273 chr22:31071644 SLC35E4 [+6641bp] C - 13 A vs. C 0.142 (C) 0.5 (C) <1 (-) 15 (-) >0.05
rs757874 chr22:31011069 TCN2 C - 13 T vs. G 0.125 (T) - >1 (-) 27 (-) >0.05
rs145621084 chr22:31040676 SLC35E4 C - 9 C vs. G - - >1 (-) 4 (-) >0.05
rs5753270 chr22:31068814 SLC35E4 [+3811bp] C - 13 T vs. C 0.133 (T) 0.458 (C) >1 (-) 16 (-) >0.05
rs77537832 chr22:30995008 PES1 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs141780303 chr22:30967969 GAL3ST1 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs75060430 chr22:30977869 PES1 C - 5 T vs. C - - >1 (-) 0 (-) >0.05
rs13057231 chr22:31028251 SLC35E4 [-3388bp] C - 5 A vs. G - - <1 (-) 31 (-) >0.05
rs731991 chr22:31025189 TCN2 [+1924bp] C - 11 A vs. G 0.475 (G) 0.208 (G) <1 (-) 0 (-) >0.05
rs150906026 chr22:30996649 PES1 C - 9 A vs. G - - >1 (-) 0 (-) >0.05
rs35971909 chr22:30976383 PES1 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs4820888 chr22:31017322 TCN2 C - 12 A vs. G 0.45 (G) 0.192 (G) >1 (-) 0 (-) >0.05
rs73881478 chr22:30960413 GAL3ST1 C - 13 A vs. G 0.075 (A) - >1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.