TMEM200C, chr18:5882071-5895954 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs7505594 chr18:5834014 MIR3976 [-6680bp] C - 10 A vs. C 0.075 (A) 0.042 (A) <1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs7505594 chr18:5834014 MIR3976 [-6680bp] C - 10 A vs. C 0.075 (A) 0.042 (A) <1 (-) 0 (-) <0.05
rs75131917 chr18:5932406 L3MBTL4 [-22299bp] C - 12 A vs. G 0.042 (A) - >1 (-) 6 (-) <0.05
rs62076823 chr18:5893982 TMEM200C C - 9 T vs. C 0.05 (C) - <1 (-) 0 (-) <0.05
rs138074500 chr18:5910964 TMEM200C [+15010bp] C - 13 A vs. G - - >1 (-) 0 (-) <0.05
rs150836868 chr18:5941883 L3MBTL4 [-12822bp] C - 11 T vs. C - - <1 (-) 12 (-) >0.05
rs73938172 chr18:5834180 MIR3976 [-6514bp] C - 9 A vs. G 0.075 (A) 0.05 (A) <1 (-) 0 (-) >0.05
rs145770106 chr18:5939630 L3MBTL4 [-15075bp] C - 7 A vs. G - - <1 (-) 0 (-) >0.05
rs17480894 chr18:5944541 L3MBTL4 [-10164bp] C - 4 T vs. C - - <1 (-) 0 (-) >0.05
rs74928448 chr18:5873887 TMEM200C [-8184bp] C - 10 T vs. G 0.025 (T) - <1 (-) 0 (-) >0.05
rs1940612 chr18:5924607 TMEM200C [+28653bp] C - 13 T vs. C 0.475 (T) 0.325 (T) >1 (-) 8 (-) >0.05
rs80330437 chr18:5905750 TMEM200C [+9796bp] C - 13 A vs. G 0.025 (A) - >1 (-) 4 (-) >0.05
rs58761678 chr18:5927870 L3MBTL4 [-26835bp] C - 13 T vs. C 0.025 (T) - >1 (-) 9 (-) >0.05
rs724676 chr18:5926216 L3MBTL4 [-28489bp] C - 13 T vs. C 0.5 (C) 0.408 (C) >1 (-) 0 (-) >0.05
rs58099022 chr18:5928544 L3MBTL4 [-26161bp] C - 13 A vs. C 0.025 (C) - <1 (-) 8 (-) >0.05
rs77876115 chr18:5924080 TMEM200C [+28126bp] C - 13 T vs. C 0.025 (T) - >1 (-) 10 (-) >0.05
rs145339843 chr18:5934435 L3MBTL4 [-20270bp] C - 10 A vs. G - - >1 (-) 0 (-) >0.05
rs75481966 chr18:5923845 TMEM200C [+27891bp] C - 13 A vs. G 0.025 (A) - >1 (-) 10 (-) >0.05
rs74711925 chr18:5901468 TMEM200C [+5514bp] C - 13 A vs. C 0.033 (A) 0.117 (A) >1 (-) 21 (-) >0.05
rs74605381 chr18:5901365 TMEM200C [+5411bp] C - 13 A vs. G 0.033 (A) 0.133 (A) >1 (-) 19 (-) >0.05
rs1940613 chr18:5923280 TMEM200C [+27326bp] C - 13 A vs. G 0.025 (A) - >1 (-) 9 (-) >0.05
rs138258776 chr18:5917995 TMEM200C [+22041bp] C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs76509089 chr18:5935107 L3MBTL4 [-19598bp] C - 13 T vs. C 0.025 (T) - >1 (-) 9 (-) >0.05
rs77975108 chr18:5908760 TMEM200C [+12806bp] C - 13 A vs. T 0.025 (A) - >1 (-) 9 (-) >0.05
rs60992345 chr18:5907602 TMEM200C [+11648bp] C - 13 A vs. G 0.025 (G) - <1 (-) 9 (-) >0.05
rs78819318 chr18:5945254 L3MBTL4 [-9451bp] C - 13 A vs. C 0.025 (A) 0.225 (A) >1 (-) 0 (-) >0.05
rs143321796 chr18:5850957 MIR3976 [+10125bp] C - 4 A vs. G - - >1 (-) 34 (-) >0.05
rs11873435 chr18:5880773 TMEM200C [-1298bp] C - 13 T vs. C 0.25 (C) - <1 (-) 0 (-) >0.05
rs11872754 chr18:5880652 TMEM200C [-1419bp] C - 13 A vs. C 0.25 (C) - <1 (-) 0 (-) >0.05
rs8088919 chr18:5881416 TMEM200C [-655bp] C - 13 A vs. G 0.25 (G) 0.017 (G) <1 (-) 0 (-) >0.05
rs8084194 chr18:5923638 TMEM200C [+27684bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs34741725 chr18:5875109 TMEM200C [-6962bp] C - 13 T vs. C 0.25 (C) 0.033 (C) <1 (-) 1 (-) >0.05
rs79206616 chr18:5905730 TMEM200C [+9776bp] C - 12 C vs. G 0.017 (C) - >1 (-) 0 (-) >0.05
rs75135025 chr18:5899321 TMEM200C [+3367bp] C - 13 A vs. G 0.025 (G) - <1 (-) 3 (-) >0.05
rs140731441 chr18:5900638 TMEM200C [+4684bp] C - 10 T vs. C - - >1 (-) 0 (-) >0.05
rs1940600 chr18:5888920 TMEM200C C - 13 T vs. G 0.383 (G) 0.242 (T) >1 (-) 0 (-) >0.05
rs9947300 chr18:5924634 TMEM200C [+28680bp] C - 13 C vs. G 0.292 (G) 0.033 (G) <1 (-) 13 (-) >0.05
rs139698484 chr18:5862993 TMEM200C [-19078bp] C - 9 T vs. C - - >1 (-) 0 (-) >0.05
rs72869603 chr18:5865867 TMEM200C [-16204bp] C - 9 A vs. G - - <1 (-) 0 (-) >0.05
rs74808675 chr18:5897974 TMEM200C [+2020bp] C - 7 A vs. C - 0.117 (A) >1 (-) 18 (-) >0.05
rs12455578 chr18:5921860 TMEM200C [+25906bp] C - 13 T vs. C - 0.108 (C) >1 (-) 1 (-) >0.05
rs78894386 chr18:5920338 TMEM200C [+24384bp] C - 13 A vs. G 0.017 (A) 0.1 (A) <1 (-) 1 (-) >0.05
rs141384323 chr18:5940095 L3MBTL4 [-14610bp] C - 3 A vs. C - - <1 (-) 49 (-) >0.05
rs6506341 chr18:5869838 TMEM200C [-12233bp] C - 13 A vs. G 0.417 (A) 0.225 (G) <1 (-) 0 (-) >0.05
rs35362389 chr18:5861720 TMEM200C [-20351bp] C - 13 T vs. G 0.092 (G) - <1 (-) 0 (-) >0.05
rs77231600 chr18:5850612 MIR3976 [+9780bp] C - 9 A vs. G - 0.075 (A) <1 (-) 4 (-) >0.05
rs35317528 chr18:5874462 TMEM200C [-7609bp] C - 13 T vs. C 0.092 (T) - >1 (-) 0 (-) >0.05
rs78991688 chr18:5905432 TMEM200C [+9478bp] C - 13 T vs. C 0.017 (C) - <1 (-) 21 (-) >0.05
rs62076814 chr18:5839783 MIR3976 [-911bp] C - 12 T vs. G 0.033 (G) - <1 (-) 14 (-) >0.05
rs62076827 chr18:5909942 TMEM200C [+13988bp] C - 13 T vs. G 0.1 (G) - <1 (-) 0 (-) >0.05
rs75251162 chr18:5837980 MIR3976 [-2714bp] C - 9 A vs. C - 0.042 (C) >1 (-) 8 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.