TMEM200C, chr18:5882071-5895954 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs7505594 chr18:5834014 MIR3976 [-6680bp] C - 10 A vs. C 0.075 (A) 0.042 (A) <1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs12959856 chr18:5878779 TMEM200C [-3292bp] C - 13 T vs. G 0.317 (T) 0.267 (G) <1 (-) 0 (-) >0.05
rs8094014 chr18:5940341 L3MBTL4 [-14364bp] C - 13 A vs. G 0.025 (G) 0.358 (G) <1 (-) 0 (-) >0.05
rs56046854 chr18:5856706 MIR3976 [+15874bp] C - 13 A vs. C 0.092 (C) 0.042 (C) <1 (-) 0 (-) >0.05
rs9949516 chr18:5930506 L3MBTL4 [-24199bp] C - 13 A vs. C 0.408 (A) 0.442 (C) >1 (-) 0 (-) >0.05
rs76636768 chr18:5924844 TMEM200C [+28890bp] C - 13 A vs. G 0.092 (A) 0.033 (A) >1 (-) 0 (-) >0.05
rs4798415 chr18:5930934 L3MBTL4 [-23771bp] C - 13 T vs. C 0.408 (C) 0.442 (T) <1 (-) 0 (-) >0.05
rs4798417 chr18:5932276 L3MBTL4 [-22429bp] C - 13 A vs. G 0.408 (G) 0.442 (A) <1 (-) 0 (-) >0.05
rs62076828 chr18:5910986 TMEM200C [+15032bp] C - 13 T vs. C 0.108 (C) 0.017 (C) <1 (-) 0 (-) >0.05
rs12961507 chr18:5930480 L3MBTL4 [-24225bp] C - 13 A vs. G 0.25 (G) 0.042 (G) <1 (-) 9 (-) >0.05
rs112496543 chr18:5939019 L3MBTL4 [-15686bp] C - 13 T vs. C 0.092 (T) - <1 (-) 0 (-) >0.05
rs12963153 chr18:5934003 L3MBTL4 [-20702bp] C - 13 A vs. T 0.408 (T) 0.433 (A) <1 (-) 0 (-) >0.05
rs7505868 chr18:5894929 TMEM200C C - 12 A vs. G 0.408 (A) - <1 (-) 0 (-) >0.05
rs75809161 chr18:5859608 MIR3976 [+18776bp] C - 13 A vs. G 0.142 (A) - >1 (-) 0 (-) >0.05
rs12964602 chr18:5937224 L3MBTL4 [-17481bp] C - 13 A vs. T 0.25 (A) 0.042 (A) >1 (-) 0 (-) >0.05
rs12963709 chr18:5925971 L3MBTL4 [-28734bp] C - 13 A vs. G 0.242 (G) - <1 (-) 12 (-) >0.05
rs62076829 chr18:5913148 TMEM200C [+17194bp] C - 13 A vs. G 0.108 (G) - <1 (-) 0 (-) >0.05
rs11874009 chr18:5913575 TMEM200C [+17621bp] C - 13 T vs. C 0.108 (T) - >1 (-) 0 (-) >0.05
rs635546 chr18:5937732 L3MBTL4 [-16973bp] C - 13 A vs. G 0.375 (A) 0.258 (A) >1 (-) 0 (-) >0.05
rs11659973 chr18:5932670 L3MBTL4 [-22035bp] C - 13 T vs. G 0.25 (G) 0.042 (G) <1 (-) 7 (-) >0.05
rs57699736 chr18:5916161 TMEM200C [+20207bp] C - 13 T vs. C 0.108 (C) - <1 (-) 0 (-) >0.05
rs59504640 chr18:5915709 TMEM200C [+19755bp] C - 13 A vs. G 0.108 (G) - <1 (-) 0 (-) >0.05
rs7504640 chr18:5899533 TMEM200C [+3579bp] C - 13 T vs. C 0.45 (T) 0.208 (T) >1 (-) 39 (-) >0.05
rs2212522 chr18:5900773 TMEM200C [+4819bp] C - 13 T vs. C 0.208 (T) 0.458 (T) >1 (-) 0 (-) >0.05
chr18:5846708 chr18:5846708 MIR3976 [+5876bp] C - 8 A vs. G - - <1 (-) 0 (-) >0.05
rs7244648 chr18:5920977 TMEM200C [+25023bp] C - 13 A vs. G 0.467 (A) 0.458 (G) >1 (-) 0 (-) >0.05
rs144883744 chr18:5844751 MIR3976 [+3919bp] C - 5 T vs. C - - >1 (-) 0 (-) >0.05
rs35840908 chr18:5933374 L3MBTL4 [-21331bp] C - 13 T vs. C 0.25 (C) 0.042 (C) <1 (-) 4 (-) >0.05
rs35998790 chr18:5933337 L3MBTL4 [-21368bp] C - 13 A vs. G 0.25 (A) 0.042 (A) >1 (-) 4 (-) >0.05
rs80174383 chr18:5920171 TMEM200C [+24217bp] C - 12 A vs. G 0.083 (A) - <1 (-) 0 (-) >0.05
rs8092700 chr18:5861099 MIR3976 [+20267bp] C - 13 C vs. G 0.35 (C) 0.217 (C) >1 (-) 0 (-) >0.05
rs7244585 chr18:5935337 L3MBTL4 [-19368bp] C - 13 T vs. G 0.367 (G) 0.492 (G) <1 (-) 0 (-) >0.05
rs72868373 chr18:5900523 TMEM200C [+4569bp] C - 13 C vs. G 0.067 (C) 0.117 (C) >1 (-) 15 (-) >0.05
rs72867866 chr18:5842789 MIR3976 [+1957bp] C - 5 T vs. C 0.033 (T) - >1 (-) 0 (-) >0.05
rs7507075 chr18:5935679 L3MBTL4 [-19026bp] C - 13 T vs. C 0.25 (C) - <1 (-) 9 (-) >0.05
rs6506339 chr18:5848414 MIR3976 [+7582bp] C - 12 T vs. C 0.283 (C) 0.342 (C) <1 (-) 13 (-) >0.05
rs12457858 chr18:5925531 L3MBTL4 [-29174bp] C - 13 A vs. G 0.342 (G) 0.342 (G) <1 (-) 37 (-) >0.05
rs72855838 chr18:5841028 MIR3976 [+196bp] C - 5 A vs. G 0.042 (G) - <1 (-) 0 (-) >0.05
rs9965310 chr18:5840617 MIR3976 [-77bp] C - 12 T vs. G 0.25 (T) 0.342 (T) >1 (-) 7 (-) >0.05
rs12456471 chr18:5899681 TMEM200C [+3727bp] C - 8 C vs. G - 0.117 (C) >1 (-) 0 (-) >0.05
rs16948887 chr18:5884370 TMEM200C C - 13 T vs. C 0.158 (C) - <1 (-) 0 (-) >0.05
rs7234672 chr18:5885157 TMEM200C C - 13 T vs. C 0.158 (T) - >1 (-) 0 (-) >0.05
rs9959236 chr18:5883633 TMEM200C C - 13 T vs. C 0.158 (C) - <1 (-) 0 (-) >0.05
rs72867860 chr18:5842728 MIR3976 [+1896bp] C - 5 A vs. G - - <1 (-) 0 (-) >0.05
rs10502334 chr18:5903698 TMEM200C [+7744bp] C - 13 A vs. G 0.167 (A) 0.342 (A) >1 (-) 0 (-) >0.05
rs9954653 chr18:5840503 MIR3976 [-191bp] C - 12 A vs. G 0.25 (G) 0.342 (G) <1 (-) 4 (-) >0.05
rs72867885 chr18:5846082 MIR3976 [+5250bp] C - 5 A vs. G 0.042 (G) - <1 (-) 0 (-) >0.05
rs11662025 chr18:5886729 TMEM200C C - 13 T vs. C 0.158 (T) - >1 (-) 0 (-) >0.05
rs9966028 chr18:5840674 MIR3976 [-20bp] C - 12 A vs. C 0.25 (A) 0.342 (A) >1 (-) 6 (-) >0.05
rs11081217 chr18:5852964 MIR3976 [+12132bp] C - 13 C vs. G 0.275 (G) 0.192 (G) <1 (-) 5 (-) >0.05
rs7506605 chr18:5843430 MIR3976 [+2598bp] C - 12 A vs. T 0.242 (A) 0.333 (A) >1 (-) 7 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.