TMEM200C, chr18:5882071-5895954 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs7505594 chr18:5834014 MIR3976 [-6680bp] C - 10 A vs. C 0.075 (A) 0.042 (A) <1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1940595 chr18:5885900 TMEM200C C - 13 A vs. G 0.158 (A) - >1 (-) 0 (-) >0.05
rs1940594 chr18:5882643 TMEM200C C - 13 T vs. C 0.158 (T) - >1 (-) 0 (-) >0.05
rs55991837 chr18:5841664 MIR3976 [+832bp] C - 5 T vs. C 0.042 (T) - >1 (-) 0 (-) >0.05
rs55829321 chr18:5841710 MIR3976 [+878bp] C - 5 A vs. G 0.042 (A) - >1 (-) 0 (-) >0.05
rs72855836 chr18:5840810 MIR3976 C - 5 A vs. G 0.042 (A) - >1 (-) 0 (-) >0.05
rs4797233 chr18:5832773 MIR3976 [-7921bp] C - 13 T vs. C 0.375 (T) 0.325 (T) >1 (-) 0 (-) >0.05
rs10502337 chr18:5904923 TMEM200C [+8969bp] C - 13 C vs. G 0.225 (C) 0.367 (C) >1 (-) 0 (-) >0.05
rs72867858 chr18:5842226 MIR3976 [+1394bp] C - 5 T vs. G 0.042 (T) - >1 (-) 0 (-) >0.05
rs586896 chr18:5943522 L3MBTL4 [-11183bp] C - 13 A vs. G 0.258 (G) 0.008 (G) >1 (-) 0 (-) >0.05
rs8096721 chr18:5904873 TMEM200C [+8919bp] C - 13 A vs. G 0.225 (A) 0.35 (A) >1 (-) 0 (-) >0.05
rs8097745 chr18:5904851 TMEM200C [+8897bp] C - 13 T vs. C 0.225 (T) 0.375 (T) >1 (-) 0 (-) >0.05
rs59214638 chr18:5904844 TMEM200C [+8890bp] C - 13 A vs. G 0.225 (G) 0.35 (G) <1 (-) 0 (-) >0.05
rs11665356 chr18:5886653 TMEM200C C - 13 A vs. G 0.158 (G) - <1 (-) 0 (-) >0.05
rs72867859 chr18:5842654 MIR3976 [+1822bp] C - 5 T vs. C 0.042 (T) - >1 (-) 0 (-) >0.05
rs76025452 chr18:5885916 TMEM200C C - 9 A vs. T 0.017 (T) - <1 (-) 0 (-) >0.05
rs72867867 chr18:5842985 MIR3976 [+2153bp] C - 5 C vs. G - - <1 (-) 0 (-) >0.05
rs72867870 chr18:5843000 MIR3976 [+2168bp] C - 5 T vs. C 0.042 (C) - <1 (-) 0 (-) >0.05
rs72867871 chr18:5843032 MIR3976 [+2200bp] C - 5 T vs. C 0.042 (T) - >1 (-) 0 (-) >0.05
rs62076816 chr18:5843287 MIR3976 [+2455bp] C - 12 A vs. G 0.192 (G) 0.133 (G) <1 (-) 23 (-) >0.05
rs9989556 chr18:5895163 TMEM200C C - 12 A vs. G 0.467 (A) 0.208 (A) <1 (-) 0 (-) >0.05
rs72855840 chr18:5841186 MIR3976 [+354bp] C - 5 T vs. G 0.042 (G) - <1 (-) 0 (-) >0.05
rs72855841 chr18:5841187 MIR3976 [+355bp] C - 5 T vs. C 0.042 (C) - <1 (-) 0 (-) >0.05
rs28665389 chr18:5900295 TMEM200C [+4341bp] C - 13 A vs. G 0.117 (A) 0.45 (A) >1 (-) 0 (-) >0.05
rs56052600 chr18:5847239 MIR3976 [+6407bp] C - 12 A vs. G 0.183 (G) 0.108 (G) <1 (-) 25 (-) >0.05
rs72867872 chr18:5843075 MIR3976 [+2243bp] C - 5 T vs. C 0.042 (T) - >1 (-) 0 (-) >0.05
rs75294756 chr18:5940787 L3MBTL4 [-13918bp] C - 11 T vs. C - 0.225 (C) <1 (-) 0 (-) >0.05
rs16948895 chr18:5886504 TMEM200C C - 13 T vs. C 0.158 (T) - >1 (-) 0 (-) >0.05
rs72867878 chr18:5843329 MIR3976 [+2497bp] C - 5 A vs. C 0.042 (A) - >1 (-) 0 (-) >0.05
rs72867882 chr18:5843606 MIR3976 [+2774bp] C - 5 A vs. C 0.042 (A) - >1 (-) 0 (-) >0.05
rs72867876 chr18:5843312 MIR3976 [+2480bp] C - 5 A vs. C 0.017 (A) - >1 (-) 0 (-) >0.05
rs117320237 chr18:5882651 TMEM200C C - 7 A vs. T 0.042 (T) - >1 (-) 43 (-) >0.05
rs75978839 chr18:5916271 TMEM200C [+20317bp] C - 11 T vs. C 0.05 (T) - >1 (-) 19 (-) >0.05
rs12961188 chr18:5909892 TMEM200C [+13938bp] C - 13 A vs. G 0.45 (G) 0.492 (G) <1 (-) 0 (-) >0.05
rs117293350 chr18:5844835 MIR3976 [+4003bp] C - 5 C vs. G 0.042 (G) - <1 (-) 0 (-) >0.05
rs77781808 chr18:5883833 TMEM200C C - 13 C vs. G 0.158 (G) - <1 (-) 0 (-) >0.05
rs1940598 chr18:5888773 TMEM200C C - 13 T vs. C 0.15 (T) - >1 (-) 0 (-) >0.05
rs147436740 chr18:5906386 TMEM200C [+10432bp] C - 6 A vs. G - - <1 (-) 2 (-) >0.05
rs12456496 chr18:5899787 TMEM200C [+3833bp] C - 13 A vs. G 0.375 (A) 0.142 (A) >1 (-) 0 (-) >0.05
rs7244143 chr18:5918698 TMEM200C [+22744bp] C - 13 T vs. C 0.133 (T) 0.033 (T) >1 (-) 0 (-) >0.05
rs61203475 chr18:5918072 TMEM200C [+22118bp] C - 13 A vs. G - 0.108 (G) <1 (-) 0 (-) >0.05
rs62076834 chr18:5918640 TMEM200C [+22686bp] C - 13 A vs. G 0.017 (A) 0.125 (A) >1 (-) 0 (-) >0.05
rs8097201 chr18:5923341 TMEM200C [+27387bp] C - 13 A vs. G 0.375 (G) 0.408 (G) <1 (-) 0 (-) >0.05
rs7506228 chr18:5861335 MIR3976 [+20503bp] C - 13 A vs. T 0.158 (T) - <1 (-) 0 (-) >0.05
rs9303980 chr18:5928434 L3MBTL4 [-26271bp] C - 12 T vs. C 0.367 (T) 0.333 (T) >1 (-) 0 (-) >0.05
rs6506337 chr18:5847867 MIR3976 [+7035bp] C - 13 A vs. T 0.242 (A) 0.292 (A) >1 (-) 21 (-) >0.05
rs76620499 chr18:5906276 TMEM200C [+10322bp] C - 12 A vs. G 0.008 (A) - <1 (-) 0 (-) >0.05
rs62076815 chr18:5842948 MIR3976 [+2116bp] C - 12 A vs. G 0.15 (A) 0.1 (A) >1 (-) 30 (-) >0.05
rs558673 chr18:5908869 TMEM200C [+12915bp] C - 13 T vs. C 0.183 (T) 0.308 (T) <1 (-) 25 (-) >0.05
rs78230768 chr18:5872454 TMEM200C [-9617bp] C - 4 T vs. C 0.025 (T) - >1 (-) 5 (-) >0.05
rs9950132 chr18:5916346 TMEM200C [+20392bp] C - 13 A vs. G 0.358 (G) 0.192 (G) <1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.