TMEM200C, chr18:5882071-5895954 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs7505594 chr18:5834014 MIR3976 [-6680bp] C - 10 A vs. C 0.075 (A) 0.042 (A) <1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs62076824 chr18:5899214 TMEM200C [+3260bp] C - 13 T vs. G 0.083 (G) - <1 (-) 0 (-) >0.05
rs34410897 chr18:5844627 MIR3976 [+3795bp] C - 12 T vs. C 0.15 (C) 0.142 (C) <1 (-) 31 (-) >0.05
rs1940601 chr18:5888974 TMEM200C C - 13 A vs. C 0.483 (A) 0.233 (C) <1 (-) 0 (-) >0.05
rs7234540 chr18:5912194 TMEM200C [+16240bp] C - 13 A vs. T 0.225 (A) 0.392 (A) >1 (-) 0 (-) >0.05
rs72867884 chr18:5844110 MIR3976 [+3278bp] C - 5 A vs. G 0.042 (A) - >1 (-) 0 (-) >0.05
rs11081216 chr18:5840255 MIR3976 [-439bp] C - 12 A vs. G 0.15 (G) 0.158 (G) <1 (-) 29 (-) >0.05
rs8087801 chr18:5841979 MIR3976 [+1147bp] C - 13 T vs. C 0.208 (C) 0.342 (C) <1 (-) 17 (-) >0.05
rs7230804 chr18:5921149 TMEM200C [+25195bp] C - 13 A vs. C 0.417 (A) 0.392 (A) >1 (-) 0 (-) >0.05
rs1893190 chr18:5940751 L3MBTL4 [-13954bp] C - 13 A vs. G 0.283 (A) 0.008 (A) <1 (-) 0 (-) >0.05
rs62076831 chr18:5915072 TMEM200C [+19118bp] C - 13 T vs. C - 0.1 (C) >1 (-) 12 (-) >0.05
rs72867888 chr18:5849442 MIR3976 [+8610bp] C - 5 T vs. C 0.033 (T) - >1 (-) 0 (-) >0.05
rs72867863 chr18:5842743 MIR3976 [+1911bp] C - 5 T vs. C 0.033 (C) - <1 (-) 0 (-) >0.05
rs8087368 chr18:5841696 MIR3976 [+864bp] C - 13 A vs. T 0.208 (A) 0.342 (A) >1 (-) 16 (-) >0.05
rs499074 chr18:5940165 L3MBTL4 [-14540bp] C - 13 A vs. G 0.267 (A) 0.008 (A) <1 (-) 0 (-) >0.05
rs7506380 chr18:5894264 TMEM200C C - 12 T vs. C 0.292 (C) 0.258 (C) <1 (-) 0 (-) >0.05
rs75835875 chr18:5857770 MIR3976 [+16938bp] C - 6 A vs. G 0.025 (A) - >1 (-) 2 (-) >0.05
rs72868372 chr18:5900369 TMEM200C [+4415bp] C - 13 T vs. C 0.033 (T) - >1 (-) 5 (-) >0.05
rs34339437 chr18:5938507 L3MBTL4 [-16198bp] C - 13 T vs. G 0.3 (G) 0.133 (G) <1 (-) 0 (-) >0.05
rs73384006 chr18:5894416 TMEM200C C - 12 C vs. G 0.35 (C) 0.242 (C) >1 (-) 0 (-) >0.05
rs1940605 chr18:5893969 TMEM200C C - 12 T vs. C 0.5 (C) 0.258 (C) <1 (-) 11 (-) >0.05
rs117403901 chr18:5874839 TMEM200C [-7232bp] C - 10 T vs. C 0.033 (C) - >1 (-) 0 (-) >0.05
rs79182360 chr18:5878633 TMEM200C [-3438bp] C - 13 T vs. C 0.158 (T) - >1 (-) 0 (-) >0.05
rs7507008 chr18:5839620 MIR3976 [-1074bp] C - 12 T vs. C 0.2 (T) 0.325 (T) >1 (-) 32 (-) >0.05
rs144977749 chr18:5917221 TMEM200C [+21267bp] C - 12 A vs. G - - >1 (-) 18 (-) >0.05
rs11662763 chr18:5857091 MIR3976 [+16259bp] C - 13 T vs. C 0.15 (T) - >1 (-) 0 (-) >0.05
rs150507167 chr18:5927471 L3MBTL4 [-27234bp] C - 8 A vs. C - - >1 (-) 0 (-) >0.05
rs7504934 chr18:5897091 TMEM200C [+1137bp] C - 13 C vs. G 0.433 (C) 0.45 (C) <1 (-) 21 (-) >0.05
rs28706234 chr18:5838653 MIR3976 [-2041bp] C - 5 T vs. G - 0.225 (G) <1 (-) 0 (-) >0.05
rs559016 chr18:5918324 TMEM200C [+22370bp] C - 13 T vs. G 0.092 (T) 0.292 (T) <1 (-) 23 (-) >0.05
rs11877212 chr18:5903235 TMEM200C [+7281bp] C - 13 A vs. G 0.083 (G) - <1 (-) 0 (-) >0.05
rs79582788 chr18:5902498 TMEM200C [+6544bp] C - 13 A vs. G 0.083 (A) - >1 (-) 0 (-) >0.05
rs8093690 chr18:5852696 MIR3976 [+11864bp] C - 13 T vs. C 0.308 (T) 0.292 (T) >1 (-) 0 (-) >0.05
rs6506342 chr18:5871148 TMEM200C [-10923bp] C - 13 A vs. G 0.492 (G) 0.183 (G) <1 (-) 0 (-) >0.05
rs6506343 chr18:5871420 TMEM200C [-10651bp] C - 13 T vs. C 0.492 (T) 0.183 (T) >1 (-) 0 (-) >0.05
rs35831965 chr18:5872327 TMEM200C [-9744bp] C - 13 T vs. C 0.492 (C) 0.183 (C) <1 (-) 0 (-) >0.05
rs62076825 chr18:5904211 TMEM200C [+8257bp] C - 13 T vs. G 0.083 (G) - <1 (-) 0 (-) >0.05
rs1940599 chr18:5888815 TMEM200C C - 13 T vs. C 0.258 (C) - <1 (-) 0 (-) >0.05
rs6506344 chr18:5873036 TMEM200C [-9035bp] C - 13 A vs. G 0.492 (A) 0.183 (A) >1 (-) 0 (-) >0.05
rs78488327 chr18:5888706 TMEM200C C - 12 T vs. C 0.058 (T) - <1 (-) 0 (-) >0.05
rs9948128 chr18:5892517 TMEM200C C - 12 T vs. C 0.442 (C) 0.325 (T) <1 (-) 11 (-) >0.05
rs77579256 chr18:5873682 TMEM200C [-8389bp] C - 3 T vs. G - - <1 (-) 44 (-) >0.05
rs7505112 chr18:5872695 TMEM200C [-9376bp] C - 13 A vs. G 0.492 (G) 0.167 (G) <1 (-) 0 (-) >0.05
rs12967188 chr18:5898232 TMEM200C [+2278bp] C - 13 A vs. G 0.108 (G) 0.333 (G) >1 (-) 21 (-) >0.05
rs34342129 chr18:5872472 TMEM200C [-9599bp] C - 13 T vs. C 0.5 (T) 0.183 (C) <1 (-) 0 (-) >0.05
rs11659521 chr18:5862557 TMEM200C [-19514bp] C - 13 A vs. C - - <1 (-) 0 (-) >0.05
rs4797234 chr18:5837798 MIR3976 [-2896bp] C - 3 C vs. G 0.35 (C) 0.383 (C) <1 (-) 0 (-) >0.05
rs62076826 chr18:5908355 TMEM200C [+12401bp] C - 13 A vs. G 0.083 (G) - <1 (-) 0 (-) >0.05
rs11873944 chr18:5906924 TMEM200C [+10970bp] C - 13 A vs. G 0.083 (G) - <1 (-) 0 (-) >0.05
chr18:5912328 chr18:5912328 TMEM200C [+16374bp] C - 6 A vs. T - - <1 (-) 0 (-) >0.05
rs11876129 chr18:5908566 TMEM200C [+12612bp] C - 13 T vs. C 0.083 (C) - <1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.