TMEM200C, chr18:5882071-5895954 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs7505594 chr18:5834014 MIR3976 [-6680bp] C - 10 A vs. C 0.075 (A) 0.042 (A) <1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs28667340 chr18:5838578 MIR3976 [-2116bp] C - 5 C vs. G - 0.225 (G) <1 (-) 0 (-) >0.05
rs4797232 chr18:5832745 MIR3976 [-7949bp] C - 13 T vs. C 0.375 (C) 0.433 (C) >1 (-) 0 (-) >0.05
rs12970905 chr18:5923510 TMEM200C [+27556bp] C - 13 A vs. G - - <1 (-) 18 (-) >0.05
rs1940608 chr18:5927441 L3MBTL4 [-27264bp] C - 13 A vs. G 0.042 (G) 0.217 (G) >1 (-) 0 (-) >0.05
rs7504372 chr18:5932085 L3MBTL4 [-22620bp] C - 13 T vs. C 0.058 (C) 0.292 (C) >1 (-) 12 (-) >0.05
rs7505649 chr18:5834953 MIR3976 [-5741bp] C - 3 A vs. G - 0.233 (A) >1 (-) 0 (-) >0.05
rs80248410 chr18:5902010 TMEM200C [+6056bp] C - 9 T vs. C - 0.108 (C) <1 (-) 9 (-) >0.05
rs16973390 chr18:5928479 L3MBTL4 [-26226bp] C - 13 A vs. G 0.042 (A) 0.217 (A) <1 (-) 0 (-) >0.05
rs7240823 chr18:5835594 MIR3976 [-5100bp] C - 3 A vs. G - 0.233 (A) >1 (-) 0 (-) >0.05
rs9966008 chr18:5835383 MIR3976 [-5311bp] C - 3 T vs. G - 0.233 (T) >1 (-) 0 (-) >0.05
rs9965897 chr18:5835271 MIR3976 [-5423bp] C - 3 A vs. G - 0.233 (A) >1 (-) 0 (-) >0.05
rs8088340 chr18:5836382 MIR3976 [-4312bp] C - 4 T vs. C - 0.233 (C) <1 (-) 0 (-) >0.05
rs76857496 chr18:5871800 TMEM200C [-10271bp] C - 13 A vs. C 0.158 (A) - >1 (-) 0 (-) >0.05
rs7239087 chr18:5838204 MIR3976 [-2490bp] C - 5 A vs. G - 0.225 (G) <1 (-) 0 (-) >0.05
rs7238430 chr18:5838181 MIR3976 [-2513bp] C - 5 T vs. C - 0.225 (T) >1 (-) 0 (-) >0.05
rs62076820 chr18:5878369 TMEM200C [-3702bp] C - 13 A vs. G 0.408 (G) 0.233 (A) >1 (-) 0 (-) >0.05
rs7238393 chr18:5838106 MIR3976 [-2588bp] C - 5 A vs. C - 0.225 (A) >1 (-) 0 (-) >0.05
rs56166463 chr18:5932037 L3MBTL4 [-22668bp] C - 13 T vs. C 0.042 (T) 0.217 (T) <1 (-) 0 (-) >0.05
rs78998633 chr18:5896646 TMEM200C [+692bp] C - 3 T vs. G - - <1 (-) 0 (-) >0.05
rs28515762 chr18:5855470 MIR3976 [+14638bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs8083575 chr18:5836634 MIR3976 [-4060bp] C - 4 A vs. G - 0.233 (A) >1 (-) 0 (-) >0.05
rs4798416 chr18:5930979 L3MBTL4 [-23726bp] C - 13 A vs. C 0.042 (C) 0.217 (C) >1 (-) 0 (-) >0.05
rs115983593 chr18:5909359 TMEM200C [+13405bp] C - 9 A vs. T - 0.108 (T) <1 (-) 13 (-) >0.05
rs28656885 chr18:5891637 TMEM200C C - 12 A vs. C 0.383 (A) 0.3 (A) >1 (-) 0 (-) >0.05
rs564021 chr18:5942643 L3MBTL4 [-12062bp] C - 13 A vs. G 0.275 (G) 0.25 (G) >1 (-) 0 (-) >0.05
rs28684980 chr18:5838832 MIR3976 [-1862bp] C - 6 T vs. G - 0.217 (T) >1 (-) 0 (-) >0.05
rs28626301 chr18:5838799 MIR3976 [-1895bp] C - 6 T vs. C - 0.225 (T) >1 (-) 0 (-) >0.05
rs12954424 chr18:5899362 TMEM200C [+3408bp] C - 13 A vs. C 0.225 (C) 0.042 (C) >1 (-) 29 (-) >0.05
rs11662991 chr18:5945624 L3MBTL4 [-9081bp] C - 13 T vs. C 0.383 (C) 0.433 (T) >1 (-) 0 (-) >0.05
rs8092635 chr18:5852657 MIR3976 [+11825bp] C - 13 A vs. G 0.308 (A) 0.292 (A) >1 (-) 0 (-) >0.05
rs6506340 chr18:5865735 TMEM200C [-16336bp] C - 12 A vs. G 0.25 (G) - >1 (-) 0 (-) >0.05
rs12966548 chr18:5859693 MIR3976 [+18861bp] C - 3 T vs. C 0.05 (T) - >1 (-) 0 (-) >0.05
rs8093464 chr18:5837552 MIR3976 [-3142bp] C - 5 T vs. C - 0.233 (C) <1 (-) 0 (-) >0.05
rs8089589 chr18:5867821 TMEM200C [-14250bp] C - 13 A vs. C 0.258 (A) 0.167 (A) >1 (-) 3 (-) >0.05
rs9947332 chr18:5866947 TMEM200C [-15124bp] C - 13 T vs. C 0.258 (T) 0.183 (T) >1 (-) 5 (-) >0.05
rs59211732 chr18:5936257 L3MBTL4 [-18448bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs78428919 chr18:5898799 TMEM200C [+2845bp] C - 13 T vs. C 0.117 (T) 0.333 (T) <1 (-) 31 (-) >0.05
rs12150824 chr18:5922014 TMEM200C [+26060bp] C - 13 A vs. G 0.233 (A) 0.033 (A) >1 (-) 4 (-) >0.05
rs948228 chr18:5941734 L3MBTL4 [-12971bp] C - 13 A vs. G 0.367 (G) 0.442 (A) >1 (-) 0 (-) >0.05
rs4356554 chr18:5910953 TMEM200C [+14999bp] C - 13 T vs. C 0.092 (T) - >1 (-) 0 (-) >0.05
rs948288 chr18:5942342 L3MBTL4 [-12363bp] C - 13 T vs. C 0.367 (C) 0.433 (T) >1 (-) 0 (-) >0.05
rs948227 chr18:5941426 L3MBTL4 [-13279bp] C - 13 A vs. C 0.367 (C) 0.433 (A) >1 (-) 0 (-) >0.05
rs1557310 chr18:5940556 L3MBTL4 [-14149bp] C - 13 A vs. G 0.292 (A) 0.483 (A) <1 (-) 0 (-) >0.05
rs10460017 chr18:5907062 TMEM200C [+11108bp] C - 13 T vs. C 0.142 (C) 0.333 (C) <1 (-) 0 (-) >0.05
rs7190 chr18:5889765 TMEM200C C - 13 A vs. G 0.433 (A) 0.233 (G) >1 (-) 0 (-) >0.05
rs8089046 chr18:5858660 MIR3976 [+17828bp] C - 13 A vs. T - - <1 (-) 0 (-) >0.05
rs6506335 chr18:5836116 MIR3976 [-4578bp] C - 4 A vs. G - 0.233 (G) <1 (-) 0 (-) >0.05
rs12605963 chr18:5944193 L3MBTL4 [-10512bp] C - 13 C vs. G 0.367 (C) 0.433 (G) <1 (-) 0 (-) >0.05
rs8091610 chr18:5943491 L3MBTL4 [-11214bp] C - 13 A vs. T 0.375 (A) 0.433 (T) <1 (-) 0 (-) >0.05
rs12969656 chr18:5944345 L3MBTL4 [-10360bp] C - 13 A vs. G 0.375 (A) 0.433 (G) <1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.