TMEM200C, chr18:5882071-5895954 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs7505594 chr18:5834014 MIR3976 [-6680bp] C - 10 A vs. C 0.075 (A) 0.042 (A) <1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11665403 chr18:5944557 L3MBTL4 [-10148bp] C - 13 A vs. G 0.367 (A) 0.433 (G) <1 (-) 0 (-) >0.05
rs11662086 chr18:5944741 L3MBTL4 [-9964bp] C - 13 A vs. C 0.367 (C) 0.433 (A) >1 (-) 0 (-) >0.05
rs11662696 chr18:5945376 L3MBTL4 [-9329bp] C - 13 A vs. G 0.367 (G) 0.433 (A) >1 (-) 0 (-) >0.05
rs62076837 chr18:5945010 L3MBTL4 [-9695bp] C - 12 A vs. G 0.008 (G) 0.217 (G) <1 (-) 0 (-) >0.05
rs8091360 chr18:5943664 L3MBTL4 [-11041bp] C - 13 T vs. C 0.375 (C) 0.433 (T) >1 (-) 0 (-) >0.05
rs72855829 chr18:5833123 MIR3976 [-7571bp] C - 7 A vs. T 0.05 (T) - <1 (-) 0 (-) >0.05
rs1940597 chr18:5888041 TMEM200C C - 13 A vs. G 0.4 (A) 0.233 (G) <1 (-) 0 (-) >0.05
rs11663009 chr18:5896079 TMEM200C [+125bp] C - 13 A vs. G 0.3 (A) 0.125 (A) <1 (-) 34 (-) >0.05
rs7505839 chr18:5834606 MIR3976 [-6088bp] C - 4 A vs. C - - <1 (-) 0 (-) >0.05
rs11877184 chr18:5938058 L3MBTL4 [-16647bp] C - 13 A vs. G 0.25 (G) 0.067 (G) <1 (-) 0 (-) >0.05
rs12605281 chr18:5906337 TMEM200C [+10383bp] C - 13 A vs. G 0.142 (G) 0.333 (G) <1 (-) 0 (-) >0.05
rs141871318 chr18:5918235 TMEM200C [+22281bp] C - 5 C vs. G - - <1 (-) 0 (-) >0.05
rs12605724 chr18:5906291 TMEM200C [+10337bp] C - 13 A vs. T 0.142 (A) 0.333 (A) >1 (-) 0 (-) >0.05
rs79958491 chr18:5929973 L3MBTL4 [-24732bp] C - 12 A vs. G 0.05 (G) - <1 (-) 0 (-) >0.05
rs72868368 chr18:5897513 TMEM200C [+1559bp] C - 9 T vs. C 0.025 (T) - >1 (-) 0 (-) >0.05
rs147186588 chr18:5836096 MIR3976 [-4598bp] C - 5 A vs. T - - >1 (-) 28 (-) >0.05
rs8087736 chr18:5860009 MIR3976 [+19177bp] C - 13 A vs. G 0.267 (A) 0.167 (A) >1 (-) 1 (-) >0.05
rs12457278 chr18:5893149 TMEM200C C - 12 T vs. C 0.458 (T) 0.325 (C) >1 (-) 0 (-) >0.05
rs36096636 chr18:5938120 L3MBTL4 [-16585bp] C - 13 A vs. G 0.25 (A) 0.058 (A) >1 (-) 0 (-) >0.05
rs145581452 chr18:5889601 TMEM200C C - 5 A vs. G - - >1 (-) 28 (-) >0.05
rs11661935 chr18:5944834 L3MBTL4 [-9871bp] C - 12 A vs. G 0.042 (A) - >1 (-) 0 (-) >0.05
rs9956953 chr18:5840380 MIR3976 [-314bp] C - 13 A vs. T 0.058 (A) 0.183 (A) >1 (-) 0 (-) >0.05
rs117966964 chr18:5934545 L3MBTL4 [-20160bp] C - 5 A vs. G 0.008 (A) - >1 (-) 38 (-) >0.05
rs1073950 chr18:5907965 TMEM200C [+12011bp] C - 13 A vs. G 0.142 (G) 0.342 (G) <1 (-) 0 (-) >0.05
chr18:5886829 chr18:5886829 TMEM200C C - 6 T vs. G - - >1 (-) 26 (-) >0.05
rs7241753 chr18:5939675 L3MBTL4 [-15030bp] C - 13 A vs. G 0.483 (A) 0.425 (A) >1 (-) 0 (-) >0.05
rs7236958 chr18:5864500 TMEM200C [-17571bp] C - 12 A vs. C 0.225 (A) 0.1 (A) <1 (-) 0 (-) >0.05
rs118022491 chr18:5859714 MIR3976 [+18882bp] C - 3 A vs. T 0.025 (T) - >1 (-) 0 (-) >0.05
rs12709615 chr18:5945701 L3MBTL4 [-9004bp] C - 13 T vs. G 0.375 (T) 0.433 (G) <1 (-) 0 (-) >0.05
rs79362019 chr18:5905486 TMEM200C [+9532bp] C - 11 A vs. C - 0.117 (C) <1 (-) 6 (-) >0.05
rs12958626 chr18:5919012 TMEM200C [+23058bp] C - 13 A vs. T 0.283 (T) 0.392 (T) <1 (-) 17 (-) >0.05
rs6506336 chr18:5843069 MIR3976 [+2237bp] C - 13 T vs. C 0.058 (C) 0.183 (C) <1 (-) 0 (-) >0.05
rs8086915 chr18:5849154 MIR3976 [+8322bp] C - 13 T vs. C 0.058 (T) 0.183 (T) >1 (-) 0 (-) >0.05
rs7241691 chr18:5844511 MIR3976 [+3679bp] C - 13 A vs. G 0.05 (A) 0.183 (A) >1 (-) 0 (-) >0.05
rs7242022 chr18:5844748 MIR3976 [+3916bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs7241020 chr18:5847810 MIR3976 [+6978bp] C - 13 A vs. G 0.042 (G) 0.183 (G) <1 (-) 0 (-) >0.05
rs4533370 chr18:5935528 L3MBTL4 [-19177bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs72873205 chr18:5936342 L3MBTL4 [-18363bp] C - 13 A vs. G 0.092 (A) 0.3 (A) <1 (-) 0 (-) >0.05
rs117923442 chr18:5874514 TMEM200C [-7557bp] C - 12 A vs. C 0.033 (A) - >1 (-) 28 (-) >0.05
rs8086751 chr18:5849028 MIR3976 [+8196bp] C - 13 C vs. G 0.058 (G) 0.183 (G) <1 (-) 0 (-) >0.05
rs6506345 chr18:5896376 TMEM200C [+422bp] C - 12 A vs. G 0.317 (A) 0.292 (A) <1 (-) 0 (-) >0.05
rs11081219 chr18:5875769 TMEM200C [-6302bp] C - 12 T vs. C - - <1 (-) 28 (-) >0.05
rs12954576 chr18:5918678 TMEM200C [+22724bp] C - 13 A vs. G 0.283 (G) 0.4 (G) <1 (-) 18 (-) >0.05
rs6506338 chr18:5848317 MIR3976 [+7485bp] C - 13 C vs. G 0.058 (G) 0.183 (G) <1 (-) 0 (-) >0.05
rs8093014 chr18:5940026 L3MBTL4 [-14679bp] C - 13 A vs. C 0.467 (C) 0.383 (A) >1 (-) 0 (-) >0.05
rs615039 chr18:5945625 L3MBTL4 [-9080bp] C - 5 A vs. G - - >1 (-) 74 (-) >0.05
rs60373237 chr18:5931446 L3MBTL4 [-23259bp] C - 6 T vs. C - - <1 (-) 0 (-) >0.05
rs72857704 chr18:5936518 L3MBTL4 [-18187bp] C - 13 T vs. C 0.092 (T) 0.292 (T) <1 (-) 0 (-) >0.05
rs59634764 chr18:5936903 L3MBTL4 [-17802bp] C - 13 A vs. T 0.1 (T) 0.292 (T) >1 (-) 0 (-) >0.05
rs10502339 chr18:5916282 TMEM200C [+20328bp] C - 13 T vs. C 0.058 (C) 0.358 (C) >1 (-) 19 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.