TMEM200C, chr18:5882071-5895954 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs7505594 chr18:5834014 MIR3976 [-6680bp] C - 10 A vs. C 0.075 (A) 0.042 (A) <1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs10502338 chr18:5913683 TMEM200C [+17729bp] C - 13 C vs. G 0.058 (C) 0.358 (C) <1 (-) 16 (-) >0.05
rs77309141 chr18:5911149 TMEM200C [+15195bp] C - 13 A vs. G 0.108 (G) - >1 (-) 0 (-) >0.05
rs34948998 chr18:5879800 TMEM200C [-2271bp] C - 13 A vs. T 0.442 (A) 0.233 (A) <1 (-) 0 (-) >0.05
rs2155578 chr18:5912348 TMEM200C [+16394bp] C - 13 A vs. G 0.058 (G) 0.358 (G) >1 (-) 16 (-) >0.05
rs143119119 chr18:5872515 TMEM200C [-9556bp] C - 3 A vs. G - - >1 (-) 25 (-) >0.05
rs8091061 chr18:5943421 L3MBTL4 [-11284bp] C - 12 T vs. C 0.367 (C) 0.433 (T) <1 (-) 0 (-) >0.05
rs58539965 chr18:5862524 TMEM200C [-19547bp] C - 13 A vs. T - - >1 (-) 39 (-) >0.05
rs113527612 chr18:5895323 TMEM200C C - 12 A vs. G 0.25 (G) - >1 (-) 0 (-) >0.05
rs59190226 chr18:5862303 TMEM200C [-19768bp] C - 12 T vs. G 0.1 (G) 0.175 (G) >1 (-) 44 (-) >0.05
rs79653052 chr18:5862168 TMEM200C [-19903bp] C - 12 A vs. G 0.1 (A) 0.175 (A) <1 (-) 44 (-) >0.05
rs9789183 chr18:5877869 TMEM200C [-4202bp] C - 13 T vs. C 0.442 (C) 0.233 (C) >1 (-) 0 (-) >0.05
rs12966713 chr18:5877390 TMEM200C [-4681bp] C - 12 C vs. G 0.358 (C) 0.075 (C) <1 (-) 0 (-) >0.05
rs1940606 chr18:5911591 TMEM200C [+15637bp] C - 13 A vs. G 0.108 (A) 0.033 (A) <1 (-) 0 (-) >0.05
rs75541388 chr18:5860149 MIR3976 [+19317bp] C - 12 T vs. C 0.1 (C) 0.183 (C) >1 (-) 44 (-) >0.05
rs11664508 chr18:5917021 TMEM200C [+21067bp] C - 13 A vs. G - - >1 (-) 18 (-) >0.05
rs138913461 chr18:5932229 L3MBTL4 [-22476bp] C - 5 A vs. T - - <1 (-) 53 (-) >0.05
rs1940603 chr18:5933507 L3MBTL4 [-21198bp] C - 13 A vs. C - - >1 (-) 1 (-) >0.05
rs3936100 chr18:5872442 TMEM200C [-9629bp] C - 13 T vs. G 0.333 (T) 0.183 (T) >1 (-) 0 (-) >0.05
rs719699 chr18:5901789 TMEM200C [+5835bp] C - 13 C vs. G 0.233 (G) - >1 (-) 14 (-) >0.05
rs72868399 chr18:5932869 L3MBTL4 [-21836bp] C - 13 T vs. C 0.092 (T) 0.292 (T) <1 (-) 3 (-) >0.05
rs35202413 chr18:5930664 L3MBTL4 [-24041bp] C - 12 C vs. G 0.058 (C) - >1 (-) 0 (-) >0.05
rs7504258 chr18:5887633 TMEM200C C - 13 T vs. C 0.383 (T) 0.233 (T) >1 (-) 0 (-) >0.05
rs1940604 chr18:5913606 TMEM200C [+17652bp] C - 13 T vs. C 0.058 (T) 0.025 (T) >1 (-) 0 (-) >0.05
rs7507110 chr18:5887778 TMEM200C C - 13 A vs. G 0.433 (A) 0.233 (A) <1 (-) 0 (-) >0.05
rs11662860 chr18:5901511 TMEM200C [+5557bp] C - 13 A vs. C 0.217 (C) 0.042 (C) >1 (-) 15 (-) >0.05
rs117504727 chr18:5938431 L3MBTL4 [-16274bp] C - 11 A vs. G 0.025 (A) - <1 (-) 0 (-) >0.05
rs139102865 chr18:5888544 TMEM200C C - 9 A vs. G - - <1 (-) 0 (-) >0.05
rs118058160 chr18:5871275 TMEM200C [-10796bp] C - 11 A vs. C 0.025 (C) - <1 (-) 0 (-) >0.05
rs2027685 chr18:5918383 TMEM200C [+22429bp] C - 13 A vs. G 0.108 (A) - <1 (-) 0 (-) >0.05
rs12185331 chr18:5897598 TMEM200C [+1644bp] C - 13 A vs. G 0.167 (A) 0.042 (A) <1 (-) 37 (-) >0.05
rs74253876 chr18:5858361 MIR3976 [+17529bp] C - 12 T vs. C 0.083 (T) 0.167 (T) <1 (-) 43 (-) >0.05
rs12965949 chr18:5897253 TMEM200C [+1299bp] C - 13 T vs. G 0.167 (G) 0.042 (G) >1 (-) 38 (-) >0.05
rs138486365 chr18:5860062 MIR3976 [+19230bp] C - 12 A vs. G - - >1 (-) 46 (-) >0.05
rs11081220 chr18:5897823 TMEM200C [+1869bp] C - 13 A vs. G 0.175 (G) 0.025 (G) >1 (-) 37 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.