TNS1, chr2:218664512-218867718 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs10177639 chr2:218816702 TNS1 All: C 108,990 15 T vs. C 0.033 (T) - 1.21 (1.11-1.31) 0 (0-47) 2.02e-05
Meta_image?name=rs10177639

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs10177639 chr2:218816702 TNS1 All: C 108,990 15 T vs. C 0.033 (T) - 1.21 (1.11-1.31) 0 (0-47) 2.02e-05
rs13033370 chr2:218815695 TNS1 All: C 105,041 14 C vs. T 0.017 (C) - 1.29 (1.14-1.46) 0 (0-44) 7.67e-05
rs6436020 chr2:218816342 TNS1 C - 13 T vs. C 0.058 (T) 0.058 (T) >1 (-) 37 (-) <0.05
rs744753 chr2:218816078 TNS1 C - 13 T vs. C 0.058 (T) 0.058 (T) >1 (-) 37 (-) <0.05
rs11688938 chr2:218827778 TNS1 C - 13 A vs. G 0.058 (A) 0.308 (A) >1 (-) 39 (-) <0.05
rs10932734 chr2:218819136 TNS1 C - 13 A vs. C 0.092 (C) - <1 (-) 7 (-) <0.05
rs11694996 chr2:218827913 TNS1 C - 13 T vs. C 0.058 (C) 0.308 (C) <1 (-) 41 (-) <0.05
rs3791893 chr2:218819396 TNS1 C - 13 A vs. G 0.117 (A) 0.108 (A) >1 (-) 44 (-) <0.05
rs3791888 chr2:218822050 TNS1 C - 13 A vs. G 0.092 (G) 0.25 (G) <1 (-) 6 (-) <0.05
rs11676955 chr2:218815258 TNS1 C - 13 C vs. G 0.092 (G) 0.067 (G) <1 (-) 11 (-) <0.05
rs3791887 chr2:218823564 TNS1 C - 13 C vs. G 0.083 (G) 0.258 (G) <1 (-) 5 (-) <0.05
rs11896308 chr2:218822715 TNS1 C - 13 T vs. C 0.1 (C) 0.2 (C) <1 (-) 4 (-) <0.05
rs2059738 chr2:218821278 TNS1 C - 13 T vs. C 0.117 (C) 0.292 (C) <1 (-) 44 (-) <0.05
rs11685533 chr2:218822239 TNS1 C - 13 T vs. C 0.092 (C) 0.25 (C) <1 (-) 2 (-) <0.05
rs2059737 chr2:218821384 TNS1 C - 13 A vs. G 0.117 (A) 0.308 (A) >1 (-) 44 (-) <0.05
rs3791890 chr2:218821586 TNS1 C - 13 A vs. G 0.092 (G) 0.217 (G) <1 (-) 0 (-) <0.05
rs11898315 chr2:218797766 TNS1 C - 12 A vs. G 0.208 (A) 0.333 (A) >1 (-) 0 (-) <0.05
rs11682925 chr2:218824529 TNS1 C - 13 T vs. C 0.092 (T) 0.258 (T) >1 (-) 3 (-) <0.05
rs28660348 chr2:218824025 TNS1 C - 13 A vs. G 0.108 (G) 0.375 (G) <1 (-) 43 (-) <0.05
rs1365963 chr2:218799846 TNS1 C - 12 C vs. G 0.225 (C) 0.342 (C) >1 (-) 0 (-) <0.05
rs117343098 chr2:218666906 TNS1 C - 9 T vs. G - 0.008 (T) >1 (-) 0 (-) <0.05
rs11895557 chr2:218796452 TNS1 C - 12 A vs. G 0.225 (A) 0.325 (A) >1 (-) 0 (-) <0.05
rs4672862 chr2:218798645 TNS1 C - 12 T vs. C 0.225 (T) 0.325 (T) >1 (-) 0 (-) <0.05
rs1427669 chr2:218795356 TNS1 C - 12 T vs. G 0.233 (G) 0.342 (G) <1 (-) 0 (-) <0.05
rs7585036 chr2:218795794 TNS1 C - 12 C vs. G 0.225 (G) 0.017 (G) <1 (-) 0 (-) <0.05
rs13022785 chr2:218782820 TNS1 C - 9 T vs. C 0.417 (C) 0.408 (C) <1 (-) 32 (-) <0.05
rs7590152 chr2:218784877 TNS1 C - 9 A vs. G - 0.342 (G) <1 (-) 7 (-) <0.05
rs3791943 chr2:218743903 TNS1 C - 13 A vs. G 0.067 (G) - <1 (-) 0 (-) <0.05
rs4672857 chr2:218784781 TNS1 C - 9 A vs. G - 0.208 (A) >1 (-) 14 (-) <0.05
rs4672856 chr2:218784778 TNS1 C - 9 C vs. G - 0.208 (G) <1 (-) 14 (-) <0.05
rs2288174 chr2:218784409 TNS1 C - 9 A vs. G - 0.208 (A) >1 (-) 14 (-) <0.05
rs115690555 chr2:218652818 TNS1 [-11694bp] C - 9 T vs. C 0.008 (C) - <1 (-) 29 (-) <0.05
rs3791915 chr2:218784146 TNS1 C - 9 T vs. C - 0.2 (T) >1 (-) 10 (-) <0.05
rs13417602 chr2:218828434 TNS1 C - 9 T vs. C 0.108 (T) 0.175 (T) >1 (-) 26 (-) <0.05
rs143261489 chr2:218734084 TNS1 C - 9 T vs. C - - >1 (-) 3 (-) <0.05
rs3791910 chr2:218798147 TNS1 C - 12 A vs. G 0.208 (A) 0.233 (A) >1 (-) 0 (-) <0.05
rs13022979 chr2:218841301 TNS1 C - 12 A vs. G 0.142 (A) - <1 (-) 0 (-) <0.05
rs56886627 chr2:218744795 TNS1 C - 13 A vs. G 0.05 (G) 0.017 (G) <1 (-) 0 (-) <0.05
rs114795381 chr2:218636741 DIRC3 [+15425bp] C - 10 A vs. G 0.008 (A) - >1 (-) 18 (-) <0.05
rs1365964 chr2:218799554 TNS1 C - 12 A vs. G 0.2 (A) 0.233 (A) >1 (-) 0 (-) <0.05
rs115698054 chr2:218781578 TNS1 C - 6 A vs. C - - >1 (-) 44 (-) <0.05
rs72945946 chr2:218672848 TNS1 C - 12 A vs. G 0.042 (A) - >1 (-) 10 (-) <0.05
rs112121164 chr2:218887012 RUFY4 [-12671bp] C - 10 A vs. G - - <1 (-) 0 (-) <0.05
rs1427668 chr2:218795718 TNS1 C - 12 C vs. G 0.208 (C) - >1 (-) 0 (-) <0.05
rs72945961 chr2:218677800 TNS1 C - 12 A vs. G 0.042 (G) - <1 (-) 8 (-) <0.05
rs11903364 chr2:218842207 TNS1 C - 13 C vs. G 0.142 (G) - >1 (-) 0 (-) <0.05
rs142073947 chr2:218739359 TNS1 C - 6 A vs. G - - <1 (-) 0 (-) <0.05
rs35303461 chr2:218830626 TNS1 C - 12 T vs. C 0.158 (T) - <1 (-) 0 (-) <0.05
rs35090855 chr2:218830592 TNS1 C - 12 T vs. C 0.158 (T) - <1 (-) 0 (-) <0.05
rs1579406 chr2:218847092 TNS1 C - 13 A vs. C 0.158 (A) - <1 (-) 1 (-) <0.05

Association studies for this region [+]