TRIM46, chr1:155145873-155157447 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs35749011 chr1:155135036 KRTCAP2 [-6848bp] All: C 104,595 13 G vs. A - - 0.57 (0.51-0.64) 0 (0-23) 6.10e-23
Meta_image?name=rs35749011

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs12904 chr1:155106697 EFNA1 C - 13 A vs. G 0.433 (A) 0.133 (G) <1 (-) 0 (-) >0.05
rs71628645 chr1:155111307 SLC50A1 C - 10 A vs. G - - >1 (-) 0 (-) >0.05
rs144498728 chr1:155166157 THBS3 C - 9 A vs. G - - <1 (-) 0 (-) >0.05
rs4971100 chr1:155155731 TRIM46 C - 11 A vs. G 0.458 (A) 0.2 (G) >1 (-) 8 (-) >0.05
rs75925257 chr1:155138842 KRTCAP2 [-3042bp] C - 10 A vs. G 0.075 (A) - <1 (-) 19 (-) >0.05
rs4590664 chr1:155130811 KRTCAP2 [-11073bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs6665822 chr1:155103147 EFNA1 C - 13 A vs. C 0.492 (A) 0.067 (C) <1 (-) 0 (-) >0.05
rs11264331 chr1:155100265 EFNA1 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs28445596 chr1:155186729 MTX1 [+3114bp] C - 13 T vs. C 0.442 (T) 0.192 (T) <1 (-) 0 (-) >0.05
rs2974929 chr1:155197268 GBA [-6975bp] C - 13 T vs. C 0.467 (T) 0.192 (T) <1 (-) 0 (-) >0.05
rs2049805 chr1:155194980 GBA [-9263bp] C - 13 T vs. C 0.433 (T) 0.192 (T) <1 (-) 0 (-) >0.05
rs497829 chr1:155193532 MTX1 [+9917bp] C - 13 C vs. G 0.433 (C) 0.192 (C) <1 (-) 0 (-) >0.05
rs2974930 chr1:155196717 GBA [-7526bp] C - 13 A vs. G 0.433 (A) 0.2 (A) <1 (-) 0 (-) >0.05
rs390685 chr1:155182147 MTX1 C - 3 A vs. G - - <1 (-) 0 (-) >0.05
rs2990245 chr1:155197462 GBA [-6781bp] C - 13 T vs. C 0.433 (C) 0.192 (C) >1 (-) 0 (-) >0.05
rs2075570 chr1:155182164 MTX1 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs12137164 chr1:155095977 EFNA1 [-3959bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs2974935 chr1:155181843 MTX1 C - 13 T vs. G - - >1 (-) 0 (-) >0.05
rs147520018 chr1:155148429 TRIM46 C - 4 C vs. G - - <1 (-) 0 (-) >0.05
rs2990220 chr1:155190254 MTX1 [+6639bp] C - 13 A vs. T 0.442 (T) - >1 (-) 0 (-) >0.05
rs144880000 chr1:155198178 GBA [-6065bp] C - 9 A vs. C - - >1 (-) 0 (-) >0.05
rs79752373 chr1:155102709 EFNA1 C - 9 A vs. G 0.017 (A) - <1 (-) 0 (-) >0.05
rs7366775 chr1:155168930 THBS3 C - 12 A vs. G - - >1 (-) 10 (-) >0.05
rs2075571 chr1:155174106 THBS3 C - 12 T vs. C - 0.2 (C) >1 (-) 16 (-) >0.05
rs6694256 chr1:155106768 EFNA1 C - 12 T vs. C 0.033 (C) - >1 (-) 22 (-) >0.05
rs150417359 chr1:155119746 RNU7-150P [+3938bp] C - 8 T vs. C - - >1 (-) 0 (-) >0.05
rs140342156 chr1:155202147 GBA [-2096bp] C - 8 A vs. T - - <1 (-) 0 (-) >0.05
rs2974931 chr1:155195215 GBA [-9028bp] C - 13 C vs. G - - <1 (-) 0 (-) >0.05
rs144486053 chr1:155109973 SLC50A1 C - 5 T vs. G - - >1 (-) 0 (-) >0.05
rs4971101 chr1:155157635 TRIM46 [+188bp] C - 12 A vs. G 0.458 (A) 0.217 (G) >1 (-) 11 (-) >0.05
rs11809549 chr1:155143399 KRTCAP2 C - 7 T vs. C 0.025 (T) - >1 (-) 0 (-) >0.05
rs2070803 chr1:155157715 TRIM46 [+268bp] C - 12 A vs. G 0.458 (G) 0.192 (A) <1 (-) 9 (-) >0.05
rs423144 chr1:155169355 THBS3 C - 12 T vs. G - - >1 (-) 11 (-) >0.05
rs34542979 chr1:155133421 KRTCAP2 [-8463bp] C - 10 T vs. C - - >1 (-) 0 (-) >0.05
rs72704130 chr1:155207030 GBA C - 5 A vs. G 0.042 (A) - <1 (-) 0 (-) >0.05
rs34106167 chr1:155129965 KRTCAP2 [-11919bp] C - 10 T vs. C - - <1 (-) 0 (-) >0.05
rs10157792 chr1:155119845 RNU7-150P [+4037bp] C - 11 A vs. T 0.417 (A) 0.317 (T) <1 (-) 63 (-) >0.05
rs4043 chr1:155201190 GBA [-3053bp] C - 13 A vs. G 0.325 (A) - >1 (-) 1 (-) >0.05
rs9426886 chr1:155151754 TRIM46 C - 12 A vs. T 0.458 (T) 0.2 (A) <1 (-) 18 (-) >0.05
rs151256463 chr1:155119641 RNU7-150P [+3833bp] C - 6 C vs. G - - >1 (-) 0 (-) >0.05
rs1045253 chr1:155201235 GBA [-3008bp] C - 13 A vs. G 0.325 (A) 0.275 (G) >1 (-) 1 (-) >0.05
rs11264341 chr1:155151493 TRIM46 C - 12 T vs. C 0.458 (T) 0.258 (C) >1 (-) 18 (-) >0.05
rs144875396 chr1:155141857 KRTCAP2 [-27bp] C - 5 T vs. C - - <1 (-) 18 (-) >0.05
chr1:155152763 chr1:155152763 TRIM46 C - 8 A vs. C - - <1 (-) 3 (-) >0.05
rs2990246 chr1:155197602 GBA [-6641bp] C - 12 C vs. G 0.425 (C) 0.192 (G) >1 (-) 34 (-) >0.05
rs4971099 chr1:155155608 TRIM46 C - 12 A vs. G - - <1 (-) 2 (-) >0.05
rs12743084 chr1:155161168 MUC1 C - 13 C vs. G - - <1 (-) 2 (-) >0.05
rs28595322 chr1:155201993 GBA [-2250bp] C - 13 A vs. G 0.325 (G) - <1 (-) 0 (-) >0.05
rs72704117 chr1:155175089 THBS3 C - 10 T vs. C 0.025 (T) - >1 (-) 13 (-) >0.05
rs10796940 chr1:155202689 GBA [-1554bp] C - 13 A vs. C 0.325 (C) 0.275 (A) <1 (-) 0 (-) >0.05

Association studies for this region [+]