TRIM72, chr16:31225342-31236510 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs139414713 chr16:31256628 ITGAM [-14683bp] C - 4 A vs. G - - <1 (-) 57 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs139414713 chr16:31256628 ITGAM [-14683bp] C - 4 A vs. G - - <1 (-) 57 (-) <0.05
rs57348955 chr16:31185882 FUS [-5549bp] C - 13 A vs. G 0.392 (A) 0.208 (G) >1 (-) 30 (-) <0.05
rs4496161 chr16:31223876 TRIM72 [-1466bp] C - 13 A vs. G - - >1 (-) 35 (-) <0.05
rs2288005 chr16:31227908 TRIM72 C - 13 T vs. C 0.475 (C) 0.2 (C) >1 (-) 37 (-) <0.05
rs7184910 chr16:31229022 TRIM72 C - 13 A vs. G - - >1 (-) 37 (-) <0.05
rs1052352 chr16:31195279 FUS C - 13 T vs. C 0.483 (C) 0.208 (C) >1 (-) 35 (-) <0.05
rs7193943 chr16:31271063 ITGAM [-248bp] C - 13 A vs. G 0.308 (G) 0.233 (G) >1 (-) 22 (-) <0.05
rs11645526 chr16:31268239 ITGAM [-3072bp] C - 13 A vs. G 0.308 (A) 0.233 (A) <1 (-) 23 (-) <0.05
rs11641624 chr16:31268985 ITGAM [-2326bp] C - 13 T vs. C 0.308 (C) 0.233 (C) >1 (-) 23 (-) <0.05
rs3764327 chr16:31273129 ITGAM C - 13 T vs. C 0.308 (T) 0.233 (T) <1 (-) 22 (-) <0.05
rs8057320 chr16:31269551 ITGAM [-1760bp] C - 13 T vs. C 0.308 (C) 0.233 (C) >1 (-) 23 (-) <0.05
rs889549 chr16:31266951 ITGAM [-4360bp] C - 13 T vs. C 0.317 (C) 0.233 (C) >1 (-) 24 (-) <0.05
rs7196256 chr16:31273530 ITGAM C - 13 A vs. T 0.317 (T) 0.242 (T) >1 (-) 22 (-) <0.05
rs3815801 chr16:31276937 ITGAM C - 13 T vs. C 0.325 (C) 0.233 (C) >1 (-) 18 (-) <0.05
rs11865830 chr16:31271545 ITGAM C - 13 A vs. G 0.333 (G) - >1 (-) 23 (-) <0.05
rs10438639 chr16:31267698 ITGAM [-3613bp] C - 13 A vs. G 0.308 (A) 0.233 (A) <1 (-) 24 (-) <0.05
rs60660286 chr16:31275374 ITGAM C - 13 T vs. G - - <1 (-) 14 (-) <0.05
rs4561481 chr16:31259553 ITGAM [-11758bp] C - 13 A vs. G 0.325 (G) 0.233 (G) >1 (-) 35 (-) <0.05
rs8044075 chr16:31263867 ITGAM [-7444bp] C - 13 A vs. G - - <1 (-) 34 (-) <0.05
rs4889639 chr16:31261778 ITGAM [-9533bp] C - 13 A vs. G - - <1 (-) 34 (-) <0.05
rs4889640 chr16:31264267 ITGAM [-7044bp] C - 13 A vs. C 0.325 (C) 0.233 (C) >1 (-) 35 (-) <0.05
rs8062426 chr16:31263553 ITGAM [-7758bp] C - 13 A vs. G 0.333 (G) 0.225 (G) >1 (-) 35 (-) <0.05
rs9923270 chr16:31255784 ITGAM [-15527bp] C - 13 C vs. G 0.325 (G) 0.208 (G) >1 (-) 35 (-) <0.05
rs8051304 chr16:31260012 ITGAM [-11299bp] C - 13 A vs. C 0.333 (C) 0.233 (C) >1 (-) 35 (-) <0.05
rs889551 chr16:31260422 ITGAM [-10889bp] C - 13 A vs. G 0.325 (A) 0.233 (A) <1 (-) 35 (-) <0.05
rs1808430 chr16:31258993 ITGAM [-12318bp] C - 13 A vs. G - - >1 (-) 35 (-) <0.05
rs8047985 chr16:31261241 ITGAM [-10070bp] C - 13 A vs. G - - <1 (-) 35 (-) <0.05
rs8048583 chr16:31279536 ITGAM C - 13 T vs. C 0.3 (T) 0.242 (T) <1 (-) 20 (-) <0.05
rs929868 chr16:31280282 ITGAM C - 13 A vs. G 0.317 (G) 0.242 (G) >1 (-) 19 (-) <0.05
rs2011491 chr16:31280255 ITGAM C - 13 A vs. G 0.317 (G) 0.242 (G) >1 (-) 19 (-) <0.05
rs12935054 chr16:31175605 PRSS36 [+14190bp] C - 13 T vs. C - - >1 (-) 35 (-) <0.05
rs12926743 chr16:31178005 FUS [-13426bp] C - 13 A vs. G - - >1 (-) 35 (-) <0.05
rs7187143 chr16:31179800 FUS [-11631bp] C - 13 A vs. C 0.333 (C) 0.208 (C) >1 (-) 35 (-) <0.05
rs62054766 chr16:31248870 TRIM72 [+12360bp] C - 13 A vs. G - - <1 (-) 35 (-) <0.05
rs9932556 chr16:31247078 TRIM72 [+10568bp] C - 13 A vs. G - - <1 (-) 34 (-) <0.05
rs11864632 chr16:31182455 FUS [-8976bp] C - 13 C vs. G 0.333 (C) 0.2 (C) <1 (-) 35 (-) <0.05
rs12929077 chr16:31232489 TRIM72 C - 13 A vs. G 0.317 (G) 0.208 (G) >1 (-) 35 (-) <0.05
rs4889644 chr16:31282713 ITGAM C - 13 T vs. G - - <1 (-) 6 (-) <0.05
rs7186832 chr16:31230463 TRIM72 C - 13 T vs. C 0.317 (C) 0.2 (C) >1 (-) 35 (-) <0.05
rs13333997 chr16:31181111 FUS [-10320bp] C - 13 A vs. G - - <1 (-) 34 (-) <0.05
rs6565225 chr16:31280661 ITGAM C - 13 T vs. C 0.283 (T) 0.242 (T) <1 (-) 10 (-) <0.05
rs12449089 chr16:31275969 ITGAM C - 13 A vs. C 0.417 (A) 0.242 (A) <1 (-) 0 (-) <0.05
rs3764323 chr16:31216779 C16orf98 [+2006bp] C - 13 T vs. C 0.317 (C) 0.2 (C) >1 (-) 33 (-) <0.05
rs7499192 chr16:31281751 ITGAM C - 13 T vs. C 0.292 (T) 0.242 (T) <1 (-) 10 (-) <0.05
rs4889633 chr16:31216909 C16orf98 [+2136bp] C - 13 C vs. G 0.317 (C) 0.2 (C) <1 (-) 34 (-) <0.05
rs8056505 chr16:31214898 C16orf98 [+125bp] C - 13 T vs. C 0.317 (C) 0.2 (C) >1 (-) 33 (-) <0.05
rs4889538 chr16:31206913 FUS [+3786bp] C - 13 T vs. C - 0.175 (T) <1 (-) 34 (-) <0.05
rs2735393 chr16:31196105 FUS C - 13 T vs. C 0.317 (C) 0.192 (C) >1 (-) 36 (-) >0.05
rs4889537 chr16:31203529 FUS [+402bp] C - 13 C vs. G 0.317 (C) 0.2 (C) <1 (-) 34 (-) >0.05
rs741810 chr16:31193942 FUS C - 13 A vs. C 0.317 (A) 0.2 (A) <1 (-) 35 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.