Study: Nalls, 2014

Population Ethnicity Diagnosis Source # Cases (% women) # Controls (% women) AAO (sd) AAO range AAE (sd) AAE range Ctrl age (sd) Ctrl age range # Polymorphisms
USA (IPDGC-NIA) C UKPDSBB CL 937 (40%) 1896 (53%) 58 (13) - - - 63 (10) - 9,622

Polymorphisms in this population [-]

Polymorphism Location (hg19) Gene Allele contrast Ethnicity # Studies # Samples 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11684545 chr2:136539122 UBXN4 G vs. T All: C 14 108,544 0.192 (G) 0.442 (T) 0.90 (0.87-0.94) 0 (0-54) 9.21e-08
rs1865452 chr2:136539330 UBXN4 T vs. C All: C 14 108,544 0.15 (T) 0.158 (T) 0.91 (0.87-0.95) 0 (0-9) 3.60e-06
rs10188066 chr2:136539513 UBXN4 G vs. A All: C 14 108,544 0.183 (G) 0.325 (G) 0.91 (0.88-0.95) 0 (0-54) 2.29e-06
rs60963894 chr2:136539670 UBXN4 G vs. T All: C 14 108,544 0.167 (G) 0.167 (G) 0.91 (0.87-0.95) 0 (0-6) 3.21e-06
rs10496737 chr2:136540083 UBXN4 G vs. A All: C 14 108,544 0.167 (G) 0.158 (G) 0.91 (0.87-0.95) 0 (0-4) 3.25e-06
rs10928546 chr2:136544197 LCT [-1213bp] T vs. C All: C 14 108,544 - - 1.11 (1.07-1.15) 0 (0-52) 8.64e-08
rs6760329 chr2:136544752 LCT [-658bp] A vs. G All: C 14 108,544 0.167 (A) 0.325 (A) 0.91 (0.88-0.95) 0 (0-53) 3.15e-06
rs2278544 chr2:136546110 LCT A vs. G All: C 14 108,544 0.167 (A) 0.5 (A) 0.91 (0.87-0.95) 0 (0-54) 2.42e-06
rs2082729 chr2:136550109 LCT C vs. T All: C 14 108,544 0.167 (C) 0.442 (T) 0.91 (0.87-0.94) 0 (0-55) 5.22e-07
rs12998016 chr2:136551694 LCT T vs. C All: C 14 108,544 - - 1.11 (1.07-1.15) 0 (0-54) 1.46e-07
rs1030764 chr2:136553529 LCT T vs. C All: C 14 108,544 - - 1.10 (1.06-1.14) 0 (0-54) 2.70e-06
rs1011361 chr2:136553639 LCT G vs. A All: C 14 108,544 0.175 (G) 0.45 (A) 0.90 (0.87-0.94) 0 (0-54) 1.66e-07
rs2322659 chr2:136555659 LCT T vs. C All: C 14 108,544 0.175 (T) 0.492 (C) 0.92 (0.89-0.96) 0 (0-51) 4.80e-05
rs2322660 chr2:136557319 LCT C vs. T All: C 15 108,990 0.175 (C) 0.433 (T) 0.91 (0.88-0.95) 0 (0-44) 1.09e-06
rs748841 chr2:136558157 LCT C vs. T All: C 15 108,990 0.175 (C) 0.433 (T) 0.91 (0.88-0.95) 0 (0-45) 1.09e-06
rs12988076 chr2:136569848 LCT C vs. A All: C 15 108,990 0.175 (C) 0.45 (A) 0.91 (0.88-0.95) 0 (0-46) 1.00e-06
rs6719488 chr2:136575199 LCT G vs. T All: C 15 108,990 0.175 (G) 0.442 (T) 0.91 (0.88-0.95) 0 (0-45) 8.48e-07
rs892715 chr2:136576577 LCT T vs. C All: C 15 108,990 0.175 (T) 0.442 (C) 0.91 (0.88-0.95) 0 (0-48) 8.67e-07
rs4954450 chr2:136578536 LCT C vs. T All: C 15 108,990 - - 1.10 (1.06-1.14) 0 (0-45) 8.63e-07
rs2164210 chr2:136580287 LCT T vs. C All: C 15 108,990 0.175 (T) 0.442 (C) 0.91 (0.88-0.95) 0 (0-46) 8.82e-07
rs1470457 chr2:136581848 LCT G vs. A All: C 15 108,990 0.175 (G) 0.342 (G) 0.92 (0.88-0.95) 0 (0-44) 1.03e-05
rs745500 chr2:136583192 LCT G vs. A All: C 15 108,990 0.175 (G) 0.45 (A) 0.91 (0.88-0.95) 0 (0-45) 7.10e-07
rs7569057 chr2:136583958 LCT C vs. A All: C 15 108,990 0.175 (C) 0.442 (A) 0.91 (0.88-0.95) 0 (0-45) 7.18e-07
rs10186843 chr2:136586958 LCT C vs. A All: C 15 108,990 0.2 (C) 0.433 (A) 0.91 (0.88-0.95) 0 (0-44) 8.66e-07
rs112742092 chr2:136591178 LCT G vs. A All: C 14 108,544 - - 1.10 (1.06-1.15) 0 (0-45) 5.33e-07
rs62159034 chr2:136591859 LCT A vs. G All: C 15 108,990 - - 1.10 (1.06-1.14) 0 (0-40) 1.01e-06
rs6730196 chr2:136593760 LCT G vs. T All: C 15 108,990 - - 1.10 (1.06-1.14) 0 (0-43) 2.35e-06
rs2236783 chr2:136594158 LCT G vs. A All: C 15 108,990 0.175 (G) 0.383 (A) 0.91 (0.88-0.94) 0 (0-41) 6.60e-07
rs6742283 chr2:136596867 MCM6 [-329bp] G vs. A All: C 15 108,990 - - 1.10 (1.06-1.14) 0 (0-39) 7.04e-07
rs3739020 chr2:136602491 MCM6 G vs. T All: C 15 108,990 0.15 (G) 0.408 (G) 0.92 (0.88-0.95) 0 (0-43) 1.45e-05
rs3754686 chr2:136603276 MCM6 T vs. C All: C 15 108,990 0.175 (T) 0.392 (C) 0.91 (0.87-0.94) 0 (0-41) 4.09e-07
rs4954490 chr2:136608231 MCM6 G vs. A All: C 15 108,990 0.175 (G) 0.408 (A) 0.91 (0.87-0.94) 0 (0-40) 3.44e-07
rs4988235 chr2:136608646 MCM6 G vs. A All: C 14 108,544 0.225 (G) - 0.89 (0.86-0.93) 0 (0-49) 7.41e-09
rs4954493 chr2:136609975 MCM6 T vs. C All: C 15 108,990 0.183 (T) 0.383 (C) 0.91 (0.87-0.94) 0 (0-40) 3.34e-07
rs4988226 chr2:136610598 MCM6 A vs. G All: C 15 108,990 0.183 (A) 0.392 (G) 0.91 (0.87-0.94) 0 (0-40) 1.91e-07
rs309178 chr2:136611624 MCM6 C vs. T All: C 15 108,990 0.183 (C) 0.383 (T) 0.91 (0.87-0.94) 0 (0-40) 1.92e-07
rs309179 chr2:136613780 MCM6 G vs. A All: C 15 108,990 0.183 (G) 0.383 (A) 0.91 (0.87-0.94) 0 (0-39) 1.51e-07
rs309180 chr2:136614255 MCM6 G vs. A All: C 15 108,990 0.183 (G) 0.375 (A) 0.91 (0.87-0.94) 0 (0-37) 1.65e-07
rs182549 chr2:136616754 MCM6 C vs. T All: C 14 108,544 0.225 (C) - 0.90 (0.86-0.93) 0 (0-47) 9.41e-09
rs309173 chr2:136617524 MCM6 T vs. C All: C 15 108,990 - - 1.10 (1.06-1.15) 0 (0-37) 1.71e-07
rs160329 chr2:136617805 MCM6 T vs. C All: C 15 108,990 - - 1.11 (1.07-1.15) 0 (0-36) 8.57e-08
rs4988183 chr2:136622046 MCM6 C vs. T All: C 15 108,990 0.183 (C) 0.383 (C) 0.91 (0.88-0.95) 0 (0-41) 2.44e-06
rs309176 chr2:136622216 MCM6 T vs. C All: C 15 108,990 0.183 (T) 0.392 (C) 0.91 (0.87-0.94) 0 (0-36) 1.59e-07
rs309128 chr2:136629911 MCM6 A vs. G All: C 15 108,990 - - 1.10 (1.06-1.15) 0 (0-34) 1.67e-07
rs680428 chr2:136630757 MCM6 A vs. G All: C 15 108,990 0.183 (A) 0.383 (G) 0.91 (0.87-0.94) 0 (0-35) 1.65e-07
rs188680 chr2:136630989 MCM6 A vs. G All: C 15 108,990 0.183 (A) 0.383 (G) 0.91 (0.87-0.94) 0 (0-34) 1.73e-07
rs309130 chr2:136631031 MCM6 C vs. A All: C 15 108,990 0.183 (C) 0.383 (A) 0.91 (0.87-0.94) 0 (0-34) 1.78e-07
rs191079 chr2:136633771 MCM6 C vs. T All: C 15 108,990 0.167 (C) 0.417 (T) 0.91 (0.87-0.94) 0 (0-34) 2.01e-07
rs55830620 chr2:136636324 MCM6 [+2328bp] A vs. G All: C 15 108,990 - - 1.10 (1.06-1.15) 0 (0-35) 2.08e-07
rs632632 chr2:136638216 MCM6 [+4220bp] C vs. T All: C 15 108,990 0.183 (C) 0.392 (T) 0.91 (0.87-0.94) 0 (0-34) 2.24e-07