Study: Nalls, 2014

Population Ethnicity Diagnosis Source # Cases (% women) # Controls (% women) AAO (sd) AAO range AAE (sd) AAE range Ctrl age (sd) Ctrl age range # Polymorphisms
USA (IPDGC-NIA) C UKPDSBB CL 937 (40%) 1896 (53%) 58 (13) - - - 63 (10) - 9,622

Polymorphisms in this population [-]

Polymorphism Location (hg19) Gene Allele contrast Ethnicity # Studies # Samples 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs10221893 chr2:137013606 intergenic C vs. T All: C 15 108,990 0.367 (C) - 0.93 (0.90-0.97) 0 (0-48) 5.52e-05
rs4072435 chr2:137013901 intergenic C vs. T All: C 15 108,990 0.375 (C) 0.025 (T) 0.93 (0.90-0.97) 0 (0-47) 5.59e-05
rs13024450 chr2:137014611 intergenic C vs. T All: C 15 108,990 0.367 (C) - 0.93 (0.90-0.97) 0 (0-47) 5.75e-05
rs4452212 chr2:137015991 intergenic G vs. A All: C 15 108,990 0.367 (G) 0.025 (A) 0.93 (0.90-0.97) 0 (0-47) 5.57e-05
rs13034241 chr2:137021263 intergenic G vs. A All: C 15 108,990 0.358 (G) - 0.93 (0.90-0.97) 0 (0-46) 5.55e-05
rs12691879 chr2:137024329 intergenic C vs. T All: C 15 108,990 - - 0.93 (0.90-0.97) 0 (0-45) 5.34e-05
rs13004902 chr2:137027680 intergenic A vs. G All: C 15 108,990 0.367 (A) 0.025 (G) 0.93 (0.90-0.97) 0 (0-45) 5.36e-05
rs12691881 chr2:137029668 intergenic A vs. G All: C 15 108,990 0.4 (A) 0.025 (G) 0.93 (0.90-0.97) 0 (0-45) 5.31e-05
rs28855078 chr2:148039571 intergenic G vs. T All: C 15 108,990 - - 1.14 (1.04-1.24) 0 (0-38) 0.003
rs7578749 chr2:148321813 intergenic A vs. G All: C 15 108,990 0.267 (A) 0.35 (A) 0.93 (0.90-0.96) 0 (0-47) 8.87e-05
rs10178903 chr2:148336575 intergenic T vs. C All: C 15 108,990 0.292 (T) 0.35 (T) 0.93 (0.90-0.96) 0 (0-44) 5.36e-05
rs12617056 chr2:148338068 intergenic T vs. G All: C 15 108,990 0.292 (T) 0.35 (T) 0.93 (0.90-0.96) 0 (0-42) 5.85e-05
rs4629103 chr2:148339635 intergenic C vs. T All: C 15 108,990 - - 1.07 (1.04-1.11) 0 (0-48) 7.27e-05
rs6430203 chr2:148341839 intergenic C vs. A All: C 15 108,990 - - 1.07 (1.04-1.11) 0 (0-49) 7.18e-05
rs7419856 chr2:148341879 intergenic T vs. C All: C 15 108,990 0.292 (T) 0.35 (T) 0.93 (0.89-0.96) 0 (0-42) 6.21e-05
rs4972356 chr2:148582309 ACVR2A [-19777bp] A vs. G All: C 15 108,990 0.342 (A) 0.4 (A) 1.07 (1.03-1.11) 25 (0-60) 9.50e-05
rs13013743 chr2:148584943 ACVR2A [-17143bp] T vs. C All: C 15 108,990 0.342 (T) 0.4 (T) 1.07 (1.04-1.11) 26 (0-60) 6.47e-05
rs13026220 chr2:148586459 ACVR2A [-15627bp] G vs. A All: C 15 108,990 0.342 (G) 0.408 (G) 1.07 (1.04-1.11) 25 (0-60) 7.98e-05
rs13017754 chr2:148595355 ACVR2A [-6731bp] T vs. C All: C 15 108,990 0.342 (T) 0.417 (T) 1.07 (1.04-1.11) 27 (0-61) 7.11e-05
rs12998729 chr2:148617292 ACVR2A A vs. G All: C 15 108,990 0.342 (A) 0.4 (A) 1.07 (1.04-1.11) 26 (0-60) 7.95e-05
rs12987286 chr2:148663568 ACVR2A T vs. G All: C 15 108,990 0.342 (T) 0.433 (T) 1.07 (1.04-1.11) 28 (0-61) 7.57e-05
rs6729997 chr2:148665557 ACVR2A A vs. G All: C 15 108,990 0.342 (A) - 1.07 (1.04-1.11) 28 (0-61) 7.67e-05
rs13008497 chr2:148666761 ACVR2A T vs. C All: C 15 108,990 0.342 (T) 0.408 (T) 1.07 (1.04-1.11) 28 (0-61) 7.68e-05
rs723681 chr2:148668509 ACVR2A T vs. C All: C 15 108,990 0.342 (T) 0.392 (T) 1.07 (1.04-1.11) 28 (0-61) 7.63e-05
rs12463798 chr2:148716099 ORC4 T vs. G All: C 15 108,990 0.35 (T) 0.483 (T) 1.07 (1.04-1.11) 18 (0-55) 5.52e-05
rs2307394 chr2:148716428 ORC4 C vs. T All: C 15 108,990 0.342 (C) 0.483 (C) 1.07 (1.03-1.10) 23 (0-58) 1.28e-04
rs13004041 chr2:148741621 ORC4 T vs. C All: C 15 108,990 0.342 (T) 0.425 (T) 1.07 (1.04-1.11) 27 (0-61) 6.99e-05
rs13003171 chr2:148748577 ORC4 G vs. A All: C 15 108,990 0.342 (G) 0.408 (G) 1.07 (1.04-1.11) 26 (0-60) 6.84e-05
rs72855232 chr2:148748967 ORC4 A vs. G All: C 15 108,990 0.325 (A) 0.4 (A) 1.07 (1.04-1.11) 27 (0-61) 6.60e-05
rs12463554 chr2:148751612 ORC4 T vs. C All: C 15 108,990 0.342 (T) 0.408 (T) 1.07 (1.04-1.11) 26 (0-60) 7.36e-05
rs7598361 chr2:148758479 ORC4 G vs. A All: C 15 108,990 0.342 (G) 0.408 (G) 1.07 (1.04-1.11) 26 (0-60) 7.70e-05
rs12476827 chr2:148759348 ORC4 T vs. C All: C 15 108,990 - - 0.93 (0.90-0.97) 26 (0-60) 7.78e-05
rs6729803 chr2:148760626 ORC4 C vs. T All: C 15 108,990 - - 0.93 (0.90-0.97) 18 (0-55) 8.75e-05
rs6729804 chr2:148760627 ORC4 C vs. T All: C 15 108,990 - - 0.93 (0.90-0.97) 18 (0-55) 8.75e-05
rs13033664 chr2:148770274 ORC4 T vs. G All: C 15 108,990 0.342 (T) 0.4 (T) 1.07 (1.03-1.11) 26 (0-60) 8.57e-05
rs13029038 chr2:148787308 MBD5 A vs. G All: C 15 108,990 0.342 (A) 0.417 (A) 1.07 (1.03-1.11) 23 (0-58) 9.34e-05
rs13012455 chr2:148788236 MBD5 C vs. T All: C 15 108,990 0.342 (C) 0.408 (C) 1.07 (1.03-1.11) 23 (0-58) 8.65e-05
rs10186643 chr2:148803587 MBD5 T vs. G All: C 15 108,990 0.367 (T) - 1.07 (1.03-1.11) 25 (0-59) 9.03e-05
rs12465610 chr2:148936180 MBD5 C vs. A All: C 15 108,990 0.408 (C) 0.4 (C) 1.06 (1.03-1.10) 30 (0-62) 2.14e-04
rs1901811 chr2:148955732 MBD5 T vs. C All: C 14 102,085 0.408 (T) 0.408 (T) 1.08 (1.04-1.11) 25 (0-60) 5.74e-05
rs10207539 chr2:164450245 FIGN T vs. C All: C 14 105,041 - - 1.43 (1.21-1.69) 0 (0-6) 3.54e-05
rs10180617 chr2:164451154 FIGN C vs. T All: C 14 105,041 - - 1.43 (1.21-1.69) 0 (0-6) 3.51e-05
rs28684744 chr2:164452687 FIGN T vs. C All: C 14 105,041 - - 1.43 (1.21-1.69) 0 (0-5) 3.64e-05
rs36068173 chr2:164454077 FIGN C vs. T All: C 14 105,041 - - 1.52 (1.23-1.87) 0 (0-9) 9.07e-05
rs34903314 chr2:164456992 FIGN C vs. T All: C 14 105,041 - - 1.43 (1.20-1.70) 0 (0-2) 5.84e-05
rs353116 chr2:166133632 SCN2A T vs. C All: C 15 108,990 0.358 (T) 0.242 (C) 0.93 (0.90-0.97) 0 (0-43) 3.91e-05
rs353128 chr2:166138608 SCN2A G vs. A All: C 15 108,990 0.35 (G) 0.25 (A) 0.94 (0.91-0.97) 0 (0-50) 1.28e-04
rs12692873 chr2:168961473 STK39 C vs. A All: C 15 108,990 0.417 (C) 0.383 (C) 1.03 (1.00-1.07) 10 (0-47) 0.042
rs13007593 chr2:168970163 STK39 C vs. G All: C 15 108,990 0.417 (C) 0.383 (C) 1.04 (1.00-1.07) 6 (0-56) 0.033
rs13432160 chr2:168970501 STK39 C vs. T All: C 15 108,990 0.417 (C) 0.375 (C) 1.04 (1.00-1.07) 6 (0-56) 0.033