Study: Nalls, 2014

Population Ethnicity Diagnosis Source # Cases (% women) # Controls (% women) AAO (sd) AAO range AAE (sd) AAE range Ctrl age (sd) Ctrl age range # Polymorphisms
USA (IPDGC-NIA) C UKPDSBB CL 937 (40%) 1896 (53%) 58 (13) - - - 63 (10) - 9,622

Polymorphisms in this population [-]

Polymorphism Location (hg19) Gene Allele contrast Ethnicity # Studies # Samples 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs6808311 chr3:160760856 PPM1L A vs. G All: C 15 108,990 0.3 (A) 0.225 (G) 1.07 (1.04-1.11) 33 (0-64) 3.64e-05
rs6791375 chr3:160763087 PPM1L A vs. C All: C 15 108,990 - - 0.93 (0.90-0.97) 32 (0-64) 4.21e-05
rs34884182 chr3:160766493 PPM1L A vs. G All: C 15 108,990 - - 0.93 (0.90-0.97) 30 (0-62) 4.44e-05
rs1580254 chr3:160767278 PPM1L T vs. C All: C 15 108,990 0.325 (T) 0.225 (C) 1.07 (1.04-1.11) 30 (0-62) 4.59e-05
rs9839984 chr3:160768912 PPM1L T vs. C All: C 15 108,990 0.325 (T) 0.242 (C) 1.07 (1.04-1.11) 30 (0-62) 3.79e-05
rs9883566 chr3:160770323 PPM1L G vs. A All: C 15 108,990 0.258 (G) 0.358 (A) 1.07 (1.04-1.11) 35 (0-65) 6.77e-05
rs9876142 chr3:160780968 PPM1L A vs. G All: C 15 108,990 0.258 (A) 0.417 (G) 1.08 (1.04-1.11) 38 (0-67) 4.32e-05
rs13256 chr3:160796505 PPM1L A vs. G All: C 15 108,990 0.258 (A) 0.433 (G) 1.08 (1.04-1.11) 41 (0-68) 4.21e-05
rs16831886 chr3:160799830 B3GALNT1 [-1841bp] C vs. A All: C 15 108,990 0.258 (C) 0.433 (A) 1.08 (1.04-1.12) 43 (0-69) 2.26e-05
rs11717272 chr3:160810355 B3GALNT1 C vs. T All: C 15 108,990 0.258 (C) 0.442 (T) 1.08 (1.04-1.12) 44 (0-69) 1.70e-05
rs4521287 chr3:160812752 B3GALNT1 T vs. C All: C 15 108,990 0.258 (T) 0.442 (C) 1.08 (1.04-1.12) 44 (0-70) 1.62e-05
rs13071892 chr3:160817877 B3GALNT1 C vs. A All: C 15 108,990 0.258 (C) 0.442 (A) 1.08 (1.04-1.12) 45 (0-70) 1.08e-05
rs13060601 chr3:160823159 B3GALNT1 A vs. G All: C 15 108,990 0.25 (A) 0.45 (G) 1.08 (1.04-1.11) 44 (0-70) 2.34e-05
rs35914913 chr3:160826561 NMD3 G vs. A All: C 15 108,990 0.258 (G) 0.45 (A) 1.08 (1.04-1.11) 44 (0-70) 2.52e-05
rs34630898 chr3:160827038 NMD3 G vs. A All: C 15 108,990 0.258 (G) - 1.08 (1.04-1.11) 44 (0-70) 2.52e-05
rs11922957 chr3:160828865 NMD3 C vs. A All: C 15 108,990 0.258 (C) 0.442 (A) 1.08 (1.04-1.12) 44 (0-69) 2.96e-05
rs11922959 chr3:160828871 NMD3 G vs. A All: C 15 108,990 0.258 (G) 0.442 (A) 1.08 (1.04-1.12) 43 (0-69) 2.99e-05
rs4314221 chr3:160839151 NMD3 G vs. T All: C 15 108,990 - - 0.93 (0.90-0.96) 43 (0-69) 3.17e-05
rs1585483 chr3:160843111 NMD3 A vs. G All: C 15 108,990 0.25 (A) 0.417 (G) 1.08 (1.04-1.11) 44 (0-70) 3.56e-05
rs1599388 chr3:160846866 NMD3 G vs. A All: C 15 108,990 0.258 (G) 0.442 (A) 1.08 (1.04-1.11) 42 (0-69) 4.02e-05
rs6794882 chr3:160851849 NMD3 A vs. G All: C 15 108,990 0.258 (A) 0.458 (G) 1.07 (1.04-1.11) 42 (0-69) 3.72e-05
rs7618924 chr3:160855599 NMD3 C vs. T All: C 15 108,990 0.258 (C) 0.433 (T) 1.07 (1.04-1.11) 43 (0-69) 4.17e-05
rs73023235 chr3:160864123 NMD3 A vs. G All: C 15 108,990 0.258 (A) 0.417 (G) 1.07 (1.04-1.11) 42 (0-68) 5.56e-05
rs4494975 chr3:160866768 NMD3 T vs. C All: C 15 108,990 0.258 (T) 0.433 (C) 1.08 (1.04-1.11) 42 (0-69) 3.78e-05
rs6441362 chr3:160877613 NMD3 A vs. G All: C 15 108,990 0.258 (A) 0.45 (G) 1.07 (1.04-1.11) 39 (0-67) 7.41e-05
rs13085336 chr3:160880599 NMD3 A vs. G All: C 15 108,990 0.258 (A) 0.45 (G) 1.07 (1.04-1.11) 39 (0-67) 8.02e-05
rs1599375 chr3:160897771 NMD3 C vs. T All: C 15 108,990 0.258 (C) 0.425 (T) 1.07 (1.04-1.11) 39 (0-67) 9.93e-05
rs16831981 chr3:160897780 NMD3 C vs. T All: C 15 108,990 0.258 (C) 0.425 (T) 1.07 (1.04-1.11) 39 (0-67) 1.00e-04
rs4679672 chr3:160901020 NMD3 A vs. G All: C 15 108,990 0.258 (A) 0.442 (G) 1.07 (1.03-1.11) 38 (0-66) 1.15e-04
rs11713441 chr3:160906855 NMD3 C vs. T All: C 15 108,990 0.258 (C) 0.433 (T) 1.07 (1.04-1.11) 28 (0-61) 7.45e-05
rs7638370 chr3:160921793 NMD3 T vs. G All: C 15 108,990 0.275 (T) 0.442 (G) 1.08 (1.04-1.11) 33 (0-64) 4.55e-05
rs35127376 chr3:160927289 NMD3 C vs. T All: C 15 108,990 0.267 (C) 0.442 (T) 1.07 (1.03-1.11) 35 (0-65) 1.18e-04
rs28384382 chr3:160939141 NMD3 T vs. C All: C 15 108,990 0.283 (T) 0.433 (C) 1.07 (1.04-1.11) 36 (0-65) 5.00e-05
rs35310734 chr3:160943209 NMD3 G vs. T All: C 15 108,990 0.333 (G) 0.425 (T) 1.08 (1.04-1.12) 38 (0-66) 1.15e-05
rs66508859 chr3:160946351 NMD3 T vs. C All: C 15 108,990 0.325 (T) 0.408 (C) 1.08 (1.04-1.12) 39 (0-67) 8.55e-06
rs73026974 chr3:160963231 NMD3 C vs. A All: C 15 108,990 0.333 (C) 0.383 (A) 1.08 (1.04-1.12) 39 (0-67) 8.01e-06
rs73026976 chr3:160964271 NMD3 A vs. G All: C 15 108,990 0.333 (A) 0.433 (G) 1.08 (1.04-1.12) 39 (0-67) 7.91e-06
rs4493447 chr3:160966011 NMD3 C vs. T All: C 15 108,990 - - 0.93 (0.90-0.96) 38 (0-67) 8.63e-06
rs7648279 chr3:160979646 NMD3 [+8326bp] A vs. G All: C 15 108,990 0.333 (A) 0.425 (G) 1.08 (1.04-1.12) 39 (0-67) 7.98e-06
rs34972965 chr3:160984296 NMD3 [+12976bp] A vs. G All: C 15 108,990 0.342 (A) 0.408 (G) 1.08 (1.05-1.12) 39 (0-67) 6.07e-06
rs35462273 chr3:160991877 NMD3 [+20557bp] T vs. C All: C 15 108,990 0.358 (T) 0.433 (C) 1.08 (1.04-1.12) 39 (0-67) 7.68e-06
rs34016896 chr3:160992864 NMD3 [+21544bp] T vs. C All: C 21 120,238 0.333 (T) 0.433 (C) 1.06 (1.03-1.09) 33 (0-61) 4.69e-05
rs4856756 chr3:160999414 NMD3 [+28094bp] A vs. G All: C 15 108,990 0.333 (A) 0.425 (G) 1.08 (1.04-1.12) 37 (0-66) 7.87e-06
rs13059386 chr3:161000894 NMD3 [+29574bp] A vs. G All: C 15 108,990 - - 0.93 (0.90-0.96) 38 (0-67) 8.01e-06
rs7610800 chr3:161002582 NMD3 [+31262bp] T vs. C All: C 15 108,990 0.342 (T) 0.433 (C) 1.08 (1.04-1.12) 39 (0-67) 9.81e-06
rs4856769 chr3:161004549 NMD3 [+33229bp] A vs. C All: C 15 108,990 0.333 (A) 0.417 (C) 1.08 (1.04-1.12) 38 (0-66) 8.26e-06
rs1382429 chr3:161015153 NMD3 [+43833bp] C vs. T All: C 15 108,990 0.333 (C) 0.433 (T) 1.08 (1.04-1.12) 37 (0-66) 7.58e-06
rs7647118 chr3:161016165 NMD3 [+44845bp] C vs. T All: C 15 108,990 0.342 (C) 0.433 (T) 1.08 (1.04-1.12) 38 (0-66) 7.40e-06
rs13062740 chr3:161024208 SPTSSB [-38372bp] A vs. G All: C 15 108,990 0.325 (A) 0.408 (G) 1.08 (1.04-1.12) 35 (0-65) 6.50e-06
rs11715591 chr3:161043137 SPTSSB [-19443bp] T vs. C All: C 15 108,990 0.325 (T) 0.433 (C) 1.08 (1.04-1.12) 37 (0-66) 8.88e-06