SGIP1, chr1:66999066-67213982 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs141167995 chr1:66978205 SGIP1 [-20861bp] C - 12 A vs. G - - >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs56336376 chr1:67229505 TCTEX1D1 C - 13 A vs. T 0.208 (T) 0.158 (T) >1 (-) 0 (-) >0.05
rs12127884 chr1:67088657 SGIP1 C - 13 C vs. G 0.117 (G) 0.475 (G) <1 (-) 1 (-) >0.05
rs12131306 chr1:67086547 SGIP1 C - 13 T vs. C 0.117 (T) 0.475 (T) >1 (-) 0 (-) >0.05
rs7533097 chr1:66969084 SGIP1 [-29982bp] C - 13 T vs. C 0.067 (C) 0.0 (C) >1 (-) 19 (-) >0.05
rs41511845 chr1:67055937 SGIP1 C - 13 T vs. C 0.208 (C) 0.158 (C) >1 (-) 0 (-) >0.05
rs41405244 chr1:67055712 SGIP1 C - 13 C vs. G 0.217 (G) 0.158 (G) >1 (-) 0 (-) >0.05
rs41418445 chr1:67055798 SGIP1 C - 13 A vs. C 0.208 (C) 0.158 (C) >1 (-) 0 (-) >0.05
rs6588212 chr1:67086881 SGIP1 C - 13 A vs. G 0.2 (G) 0.117 (G) >1 (-) 0 (-) >0.05
rs6588211 chr1:67086749 SGIP1 C - 13 T vs. C 0.2 (T) 0.117 (T) <1 (-) 0 (-) >0.05
rs6588210 chr1:67084419 SGIP1 C - 13 C vs. G 0.2 (C) 0.117 (C) <1 (-) 0 (-) >0.05
rs1415975 chr1:66962193 SGIP1 [-36873bp] C - 13 T vs. C 0.067 (C) 0.0 (C) >1 (-) 20 (-) >0.05
rs141173429 chr1:67154648 SGIP1 C - 3 A vs. G - - >1 (-) 17 (-) >0.05
rs58064608 chr1:67081056 SGIP1 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs4428858 chr1:67080834 SGIP1 C - 13 T vs. C 0.117 (T) 0.475 (T) >1 (-) 0 (-) >0.05
rs4233317 chr1:67080961 SGIP1 C - 13 C vs. G 0.117 (C) 0.475 (C) >1 (-) 0 (-) >0.05
rs6689183 chr1:67052469 SGIP1 C - 13 T vs. C 0.208 (T) 0.125 (T) <1 (-) 0 (-) >0.05
rs6689333 chr1:67052451 SGIP1 C - 13 A vs. G 0.208 (A) 0.158 (A) <1 (-) 0 (-) >0.05
rs2121054 chr1:66988586 SGIP1 [-10480bp] C - 13 T vs. G 0.233 (G) 0.458 (G) <1 (-) 0 (-) >0.05
rs6695554 chr1:67230205 TCTEX1D1 C - 13 T vs. G 0.217 (G) 0.167 (G) >1 (-) 0 (-) >0.05
rs12074963 chr1:67054383 SGIP1 C - 13 A vs. G 0.208 (A) 0.158 (A) <1 (-) 0 (-) >0.05
rs72676189 chr1:67052025 SGIP1 C - 13 A vs. G 0.208 (G) 0.125 (G) >1 (-) 0 (-) >0.05
rs72676194 chr1:67053698 SGIP1 C - 13 A vs. C 0.208 (C) 0.117 (C) >1 (-) 0 (-) >0.05
rs12045543 chr1:67073063 SGIP1 C - 13 T vs. C 0.117 (C) 0.483 (C) <1 (-) 0 (-) >0.05
rs2166307 chr1:67052736 SGIP1 C - 13 T vs. C 0.208 (C) 0.158 (C) >1 (-) 0 (-) >0.05
rs113108473 chr1:67005089 SGIP1 C - 10 T vs. C - - >1 (-) 23 (-) >0.05
rs1338194 chr1:66986476 SGIP1 [-12590bp] C - 12 A vs. T 0.292 (T) - <1 (-) 4 (-) >0.05
rs7535076 chr1:67062592 SGIP1 C - 13 A vs. G 0.117 (G) 0.308 (G) >1 (-) 0 (-) >0.05
rs114459500 chr1:66954637 SGIP1 [-44429bp] C - 7 T vs. C 0.008 (C) - <1 (-) 0 (-) >0.05
rs12135689 chr1:67067629 SGIP1 C - 13 T vs. C 0.117 (C) 0.475 (C) <1 (-) 0 (-) >0.05
rs20354 chr1:67071356 SGIP1 C - 13 T vs. G 0.2 (T) 0.117 (T) <1 (-) 0 (-) >0.05
rs7532442 chr1:67049495 SGIP1 C - 13 T vs. C 0.208 (C) 0.158 (C) >1 (-) 0 (-) >0.05
rs150495427 chr1:67024116 SGIP1 C - 3 T vs. C - - <1 (-) 0 (-) >0.05
rs7520353 chr1:67049415 SGIP1 C - 13 T vs. C 0.208 (T) 0.158 (T) <1 (-) 0 (-) >0.05
rs144228836 chr1:67062069 SGIP1 C - 9 T vs. C - - >1 (-) 38 (-) >0.05
rs12072937 chr1:67048995 SGIP1 C - 13 T vs. G 0.208 (G) 0.15 (G) >1 (-) 0 (-) >0.05
rs4655502 chr1:67081062 SGIP1 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs3901541 chr1:67073436 SGIP1 C - 13 T vs. C 0.2 (C) 0.117 (C) >1 (-) 0 (-) >0.05
rs17472890 chr1:66991492 SGIP1 [-7574bp] C - 13 A vs. T 0.217 (T) 0.175 (T) >1 (-) 0 (-) >0.05
rs12729740 chr1:67068051 SGIP1 C - 13 T vs. G 0.117 (T) 0.475 (T) >1 (-) 0 (-) >0.05
rs12066541 chr1:67048928 SGIP1 C - 13 T vs. G 0.208 (T) 0.142 (T) <1 (-) 0 (-) >0.05
rs11208913 chr1:67048924 SGIP1 C - 13 T vs. C 0.208 (C) 0.117 (C) >1 (-) 0 (-) >0.05
rs12044655 chr1:67081540 SGIP1 C - 13 A vs. G 0.117 (A) 0.475 (A) >1 (-) 0 (-) >0.05
rs1415983 chr1:66958467 SGIP1 [-40599bp] C - 13 T vs. C 0.067 (T) 0.008 (T) <1 (-) 22 (-) >0.05
rs55950016 chr1:67253900 TCTEX1D1 [+9430bp] C - 13 A vs. C 0.267 (C) 0.083 (C) >1 (-) 0 (-) >0.05
rs7535868 chr1:67235541 TCTEX1D1 C - 12 T vs. C 0.217 (T) 0.167 (T) <1 (-) 0 (-) >0.05
rs72679015 chr1:67067467 SGIP1 C - 13 T vs. C 0.192 (T) 0.117 (T) <1 (-) 0 (-) >0.05
rs7531750 chr1:67098664 SGIP1 C - 13 A vs. G 0.192 (A) 0.117 (A) <1 (-) 0 (-) >0.05
rs12116888 chr1:67088528 SGIP1 C - 13 T vs. C 0.117 (C) 0.475 (C) <1 (-) 0 (-) >0.05
rs12126819 chr1:67087568 SGIP1 C - 13 T vs. C 0.117 (T) 0.475 (T) >1 (-) 0 (-) >0.05
rs1338209 chr1:66957094 SGIP1 [-41972bp] C - 13 T vs. C 0.067 (T) 0.008 (T) <1 (-) 22 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.