TCTEX1D1, chr1:67218142-67244470 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11208951 chr1:67188107 SGIP1 C - 13 T vs. C 0.35 (T) 0.183 (T) <1 (-) 30 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11208951 chr1:67188107 SGIP1 C - 13 T vs. C 0.35 (T) 0.183 (T) <1 (-) 30 (-) <0.05
rs1498354 chr1:67180489 SGIP1 C - 13 A vs. T 0.35 (A) 0.192 (A) <1 (-) 33 (-) <0.05
rs10889649 chr1:67178005 SGIP1 C - 13 A vs. G 0.35 (A) 0.183 (A) <1 (-) 33 (-) <0.05
rs1547644 chr1:67175557 SGIP1 C - 13 A vs. G 0.342 (G) 0.192 (G) >1 (-) 33 (-) <0.05
rs3738167 chr1:67171266 SGIP1 C - 13 T vs. G 0.35 (T) 0.183 (T) <1 (-) 34 (-) <0.05
rs72671650 chr1:67265546 INSL5 C - 12 A vs. G 0.117 (G) 0.333 (G) <1 (-) 0 (-) <0.05
rs2181625 chr1:67192271 SGIP1 C - 13 A vs. G 0.342 (G) 0.15 (G) >1 (-) 31 (-) <0.05
rs2312591 chr1:67268642 INSL5 [+1703bp] C - 13 A vs. C 0.492 (A) 0.333 (C) <1 (-) 39 (-) <0.05
rs532564 chr1:67223503 TCTEX1D1 C - 13 A vs. G 0.425 (A) - >1 (-) 0 (-) <0.05
rs2312589 chr1:67258784 INSL5 [-4640bp] C - 12 A vs. G 0.1 (A) 0.175 (A) >1 (-) 0 (-) <0.05
rs688630 chr1:67222966 TCTEX1D1 C - 13 A vs. G 0.433 (G) - <1 (-) 0 (-) <0.05
rs113730648 chr1:67260318 INSL5 [-3106bp] C - 12 T vs. C - - >1 (-) 0 (-) <0.05
rs1280310 chr1:67216823 TCTEX1D1 [-1319bp] C - 13 A vs. T 0.392 (A) - >1 (-) 0 (-) <0.05
rs672230 chr1:67224330 TCTEX1D1 C - 13 T vs. C 0.425 (C) - <1 (-) 0 (-) <0.05
rs2916 chr1:67216697 TCTEX1D1 [-1445bp] C - 13 A vs. G 0.392 (A) - >1 (-) 0 (-) <0.05
rs536527 chr1:67193793 SGIP1 C - 13 T vs. G 0.408 (T) - >1 (-) 0 (-) <0.05
rs10889648 chr1:67168182 SGIP1 C - 13 T vs. C 0.433 (C) 0.317 (T) >1 (-) 9 (-) <0.05
rs515944 chr1:67219980 TCTEX1D1 C - 13 A vs. C 0.375 (A) - >1 (-) 0 (-) <0.05
rs2483704 chr1:67195353 SGIP1 C - 12 A vs. G 0.408 (A) - >1 (-) 0 (-) <0.05
rs539014 chr1:67211887 SGIP1 C - 13 A vs. G 0.4 (A) - >1 (-) 0 (-) <0.05
rs628655 chr1:67213573 SGIP1 C - 13 T vs. G 0.4 (G) - <1 (-) 0 (-) <0.05
rs544258 chr1:67219209 TCTEX1D1 C - 13 T vs. C 0.392 (C) - <1 (-) 0 (-) <0.05
rs1032634 chr1:67195192 SGIP1 C - 13 C vs. G 0.408 (G) - <1 (-) 5 (-) <0.05
rs1032635 chr1:67195184 SGIP1 C - 13 C vs. G 0.408 (G) - <1 (-) 7 (-) <0.05
rs481681 chr1:67194378 SGIP1 C - 13 A vs. G 0.4 (A) - >1 (-) 0 (-) <0.05
rs6668681 chr1:67171527 SGIP1 C - 13 T vs. G - - <1 (-) 14 (-) <0.05
rs485543 chr1:67194372 SGIP1 C - 13 T vs. C 0.4 (T) - >1 (-) 0 (-) <0.05
rs12117649 chr1:67168606 SGIP1 C - 13 A vs. G 0.433 (A) 0.317 (G) <1 (-) 14 (-) <0.05
rs12119578 chr1:67200250 SGIP1 C - 13 T vs. C - - <1 (-) 24 (-) <0.05
rs6679379 chr1:67199156 SGIP1 C - 13 T vs. C 0.325 (T) 0.225 (T) <1 (-) 24 (-) <0.05
rs2483705 chr1:67191180 SGIP1 C - 13 C vs. G 0.417 (G) - <1 (-) 0 (-) <0.05
rs12138266 chr1:67200083 SGIP1 C - 13 A vs. T 0.342 (A) 0.217 (A) <1 (-) 25 (-) <0.05
rs524114 chr1:67188335 SGIP1 C - 13 A vs. G 0.417 (A) - >1 (-) 0 (-) <0.05
rs11208957 chr1:67257871 INSL5 [-5553bp] C - 13 T vs. C 0.5 (T) 0.325 (T) >1 (-) 34 (-) <0.05
rs523956 chr1:67188276 SGIP1 C - 13 T vs. C 0.417 (C) - <1 (-) 0 (-) <0.05
rs536410 chr1:67191084 SGIP1 C - 13 T vs. C 0.417 (C) 0.008 (C) <1 (-) 0 (-) <0.05
rs693272 chr1:67221552 TCTEX1D1 C - 13 A vs. G 0.4 (G) - <1 (-) 0 (-) <0.05
rs1280313 chr1:67208185 SGIP1 C - 13 T vs. C - - >1 (-) 0 (-) <0.05
rs492109 chr1:67187133 SGIP1 C - 13 A vs. C 0.417 (A) - >1 (-) 0 (-) <0.05
rs1280280 chr1:67173903 SGIP1 C - 13 A vs. G 0.425 (G) 0.0 (G) <1 (-) 0 (-) <0.05
rs502690 chr1:67182403 SGIP1 C - 13 A vs. T 0.425 (A) 0.008 (A) >1 (-) 0 (-) <0.05
rs499263 chr1:67179937 SGIP1 C - 13 T vs. C 0.425 (T) 0.0 (T) >1 (-) 0 (-) <0.05
rs602513 chr1:67177270 SGIP1 C - 13 A vs. G 0.417 (G) 0.0 (G) <1 (-) 0 (-) <0.05
rs618093 chr1:67178428 SGIP1 C - 13 T vs. G 0.417 (T) - >1 (-) 0 (-) <0.05
rs659291 chr1:67180746 SGIP1 C - 13 A vs. C 0.417 (A) 0.0 (A) >1 (-) 0 (-) <0.05
rs523188 chr1:67174422 SGIP1 C - 13 A vs. G 0.417 (A) 0.008 (A) >1 (-) 0 (-) <0.05
rs523132 chr1:67174440 SGIP1 C - 13 A vs. G 0.417 (G) 0.008 (G) <1 (-) 0 (-) <0.05
rs665319 chr1:67175488 SGIP1 C - 13 A vs. G 0.417 (A) 0.0 (A) >1 (-) 0 (-) <0.05
rs11811067 chr1:67205722 SGIP1 C - 13 T vs. C 0.358 (C) 0.217 (C) >1 (-) 20 (-) <0.05
rs485521 chr1:67209562 SGIP1 C - 13 T vs. C 0.4 (C) - <1 (-) 0 (-) <0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.