SGIP1, chr1:66999066-67213982 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs141167995 chr1:66978205 SGIP1 [-20861bp] C - 12 A vs. G - - >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs114638580 chr1:66980066 SGIP1 [-19000bp] C - 13 A vs. G 0.017 (A) - >1 (-) 0 (-) >0.05
rs558983 chr1:67262824 INSL5 [-600bp] C - 13 T vs. G 0.2 (T) 0.017 (T) <1 (-) 27 (-) >0.05
rs12048885 chr1:67015272 SGIP1 C - 13 T vs. G 0.167 (T) 0.367 (T) <1 (-) 4 (-) >0.05
rs1280309 chr1:67217254 TCTEX1D1 [-888bp] C - 13 C vs. G 0.267 (C) 0.242 (G) <1 (-) 0 (-) >0.05
rs4393126 chr1:66952788 SGIP1 [-46278bp] C - 11 A vs. G 0.392 (G) 0.275 (A) <1 (-) 0 (-) >0.05
rs6697068 chr1:67014591 SGIP1 C - 13 T vs. C 0.158 (T) 0.367 (T) <1 (-) 4 (-) >0.05
rs150978160 chr1:67117918 SGIP1 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs502376 chr1:67222507 TCTEX1D1 C - 13 A vs. G 0.075 (G) 0.3 (G) >1 (-) 0 (-) >0.05
rs500905 chr1:67218004 TCTEX1D1 [-138bp] C - 13 C vs. G 0.267 (C) 0.242 (G) <1 (-) 0 (-) >0.05
rs114794332 chr1:67059270 SGIP1 C - 11 A vs. G 0.008 (G) - <1 (-) 28 (-) >0.05
rs17491407 chr1:67142264 SGIP1 C - 13 A vs. G 0.017 (A) 0.017 (T) >1 (-) 11 (-) >0.05
rs202065700 chr1:66949542 SGIP1 [-49524bp] C - 11 A vs. C - - >1 (-) 0 (-) >0.05
rs12034344 chr1:67032895 SGIP1 C - 13 A vs. T - - >1 (-) 9 (-) >0.05
rs17129064 chr1:67007359 SGIP1 C - 13 A vs. G 0.158 (A) 0.325 (A) <1 (-) 11 (-) >0.05
rs144279233 chr1:67235972 TCTEX1D1 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs147798742 chr1:67236403 TCTEX1D1 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs1856316 chr1:67011019 SGIP1 C - 13 T vs. C 0.15 (T) 0.025 (T) >1 (-) 0 (-) >0.05
rs4655616 chr1:67002765 SGIP1 C - 13 A vs. C 0.475 (C) 0.325 (C) <1 (-) 34 (-) >0.05
rs630410 chr1:67219574 TCTEX1D1 C - 13 A vs. G - 0.242 (A) >1 (-) 0 (-) >0.05
rs144690591 chr1:67215072 SGIP1 [+1090bp] C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs71639450 chr1:67125806 SGIP1 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs11208878 chr1:66955878 SGIP1 [-43188bp] C - 13 T vs. C 0.325 (C) 0.417 (T) <1 (-) 0 (-) >0.05
rs6701988 chr1:67041058 SGIP1 C - 13 A vs. G 0.117 (A) 0.3 (A) <1 (-) 3 (-) >0.05
rs4655626 chr1:67039795 SGIP1 C - 13 A vs. G 0.125 (A) 0.467 (A) >1 (-) 0 (-) >0.05
rs11208902 chr1:67005622 SGIP1 C - 13 T vs. C 0.483 (C) 0.325 (C) <1 (-) 34 (-) >0.05
rs4655496 chr1:67039153 SGIP1 C - 13 T vs. G - - >1 (-) 0 (-) >0.05
rs150276546 chr1:67245877 TCTEX1D1 [+1407bp] C - 7 A vs. G - - >1 (-) 0 (-) >0.05
rs1933433 chr1:66980472 SGIP1 [-18594bp] C - 13 A vs. G 0.058 (A) 0.008 (A) <1 (-) 9 (-) >0.05
rs78683273 chr1:67007598 SGIP1 C - 13 T vs. G 0.15 (G) 0.325 (G) >1 (-) 16 (-) >0.05
rs2197475 chr1:66983215 SGIP1 [-15851bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs61782763 chr1:67245687 TCTEX1D1 [+1217bp] C - 13 C vs. G 0.067 (G) - <1 (-) 15 (-) >0.05
rs56785374 chr1:67222304 TCTEX1D1 C - 13 A vs. C - - >1 (-) 0 (-) >0.05
rs1856320 chr1:66980534 SGIP1 [-18532bp] C - 13 A vs. G 0.067 (A) 0.0 (A) <1 (-) 9 (-) >0.05
rs10889626 chr1:67023150 SGIP1 C - 13 T vs. G 0.442 (G) 0.05 (T) >1 (-) 10 (-) >0.05
rs7555470 chr1:66969013 SGIP1 [-30053bp] C - 13 A vs. C 0.125 (C) 0.35 (C) <1 (-) 0 (-) >0.05
rs12124690 chr1:67021987 SGIP1 C - 13 A vs. G 0.125 (G) 0.492 (G) <1 (-) 0 (-) >0.05
rs78540992 chr1:67005817 SGIP1 C - 13 A vs. G 0.158 (G) 0.325 (G) >1 (-) 17 (-) >0.05
rs114336147 chr1:67166776 SGIP1 C - 3 A vs. G 0.008 (G) - <1 (-) 15 (-) >0.05
rs1338195 chr1:66986557 SGIP1 [-12509bp] C - 13 T vs. G 0.292 (G) 0.483 (G) <1 (-) 0 (-) >0.05
rs56395519 chr1:66988897 SGIP1 [-10169bp] C - 13 C vs. G 0.142 (G) - <1 (-) 0 (-) >0.05
rs12025668 chr1:67013278 SGIP1 C - 13 A vs. G 0.158 (G) 0.367 (G) >1 (-) 5 (-) >0.05
rs17128965 chr1:66955591 SGIP1 [-43475bp] C - 13 C vs. G 0.067 (G) 0.133 (G) <1 (-) 0 (-) >0.05
rs150427288 chr1:66976541 SGIP1 [-22525bp] C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs12046904 chr1:67013252 SGIP1 C - 13 A vs. G 0.158 (A) 0.367 (A) <1 (-) 5 (-) >0.05
rs2121052 chr1:66988477 SGIP1 [-10589bp] C - 13 A vs. G 0.292 (G) 0.483 (G) <1 (-) 0 (-) >0.05
rs112254699 chr1:67044940 SGIP1 C - 7 A vs. G 0.017 (G) - <1 (-) 0 (-) >0.05
rs17129062 chr1:67006253 SGIP1 C - 13 T vs. C 0.158 (C) 0.325 (C) >1 (-) 17 (-) >0.05
rs57941297 chr1:67007121 SGIP1 C - 13 A vs. G 0.158 (A) 0.325 (A) <1 (-) 17 (-) >0.05
rs4655615 chr1:66986275 SGIP1 [-12791bp] C - 13 A vs. T 0.292 (T) 0.483 (T) <1 (-) 0 (-) >0.05
rs116186905 chr1:66983192 SGIP1 [-15874bp] C - 9 T vs. G - - >1 (-) 29 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.