SGIP1, chr1:66999066-67213982 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs141167995 chr1:66978205 SGIP1 [-20861bp] C - 12 A vs. G - - >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs72669484 chr1:67136085 SGIP1 C - 13 T vs. C 0.083 (C) 0.067 (C) >1 (-) 0 (-) >0.05
rs11208901 chr1:67004635 SGIP1 C - 13 A vs. G 0.158 (A) 0.325 (A) <1 (-) 17 (-) >0.05
rs141236075 chr1:67141636 SGIP1 C - 6 T vs. C - - >1 (-) 0 (-) >0.05
rs492358 chr1:67202215 SGIP1 C - 10 T vs. C - - >1 (-) 8 (-) >0.05
rs151209519 chr1:67093899 SGIP1 C - 13 A vs. T - - >1 (-) 27 (-) >0.05
rs1445573 chr1:67047442 SGIP1 C - 12 A vs. G 0.317 (A) 0.367 (G) >1 (-) 24 (-) >0.05
rs17486706 chr1:67007679 SGIP1 C - 13 A vs. G 0.15 (G) - <1 (-) 0 (-) >0.05
rs148360989 chr1:67132214 SGIP1 C - 11 A vs. G - - <1 (-) 32 (-) >0.05
rs116031529 chr1:66981966 SGIP1 [-17100bp] C - 13 T vs. G 0.142 (G) 0.017 (G) <1 (-) 21 (-) >0.05
rs115871845 chr1:67068033 SGIP1 C - 13 A vs. T 0.025 (A) - <1 (-) 24 (-) >0.05
rs562910 chr1:67245658 TCTEX1D1 [+1188bp] C - 13 T vs. C 0.092 (C) 0.35 (C) >1 (-) 0 (-) >0.05
rs4567260 chr1:66953482 SGIP1 [-45584bp] C - 13 A vs. G 0.133 (G) 0.133 (G) >1 (-) 4 (-) >0.05
rs10493409 chr1:67005946 SGIP1 C - 13 A vs. T 0.15 (A) 0.025 (A) >1 (-) 0 (-) >0.05
rs1391546 chr1:67256670 INSL5 [-6754bp] C - 13 T vs. C 0.25 (T) 0.008 (T) <1 (-) 27 (-) >0.05
rs115138031 chr1:67100291 SGIP1 C - 13 T vs. C 0.042 (C) - <1 (-) 5 (-) >0.05
rs76074683 chr1:67175574 SGIP1 C - 13 A vs. G 0.025 (A) - <1 (-) 46 (-) >0.05
rs142602441 chr1:67245876 TCTEX1D1 [+1406bp] C - 13 T vs. C - - >1 (-) 44 (-) >0.05
rs75300309 chr1:67227280 TCTEX1D1 C - 6 A vs. G 0.017 (G) - >1 (-) 37 (-) >0.05
rs1338205 chr1:66992988 SGIP1 [-6078bp] C - 13 T vs. C 0.292 (T) 0.483 (T) >1 (-) 0 (-) >0.05
rs116802562 chr1:66983908 SGIP1 [-15158bp] C - 7 T vs. G 0.008 (T) - >1 (-) 0 (-) >0.05
rs17128973 chr1:66957165 SGIP1 [-41901bp] C - 5 A vs. G 0.017 (A) - >1 (-) 0 (-) >0.05
rs1415977 chr1:66994004 SGIP1 [-5062bp] C - 13 T vs. C 0.292 (C) 0.467 (C) <1 (-) 0 (-) >0.05
rs77551225 chr1:67095673 SGIP1 C - 12 T vs. C 0.025 (C) - >1 (-) 23 (-) >0.05
rs11208897 chr1:66988869 SGIP1 [-10197bp] C - 13 A vs. G 0.267 (G) 0.333 (G) <1 (-) 0 (-) >0.05
rs2312191 chr1:66952945 SGIP1 [-46121bp] C - 13 T vs. C 0.117 (T) 0.142 (T) <1 (-) 0 (-) >0.05
rs17492406 chr1:67165016 SGIP1 C - 13 T vs. C 0.025 (T) - <1 (-) 46 (-) >0.05
rs116490390 chr1:67103358 SGIP1 C - 12 T vs. C 0.025 (T) - <1 (-) 24 (-) >0.05
rs1856317 chr1:67015972 SGIP1 C - 13 T vs. C 0.267 (C) 0.2 (T) >1 (-) 0 (-) >0.05
rs12760606 chr1:67100089 SGIP1 C - 13 A vs. T 0.25 (A) 0.175 (T) >1 (-) 4 (-) >0.05
rs78345881 chr1:66949664 SGIP1 [-49402bp] C - 11 A vs. C - - <1 (-) 0 (-) >0.05
rs141100624 chr1:66956946 SGIP1 [-42120bp] C - 3 A vs. G - - >1 (-) 76 (-) >0.05
rs1874802 chr1:67239891 TCTEX1D1 C - 13 T vs. C 0.017 (T) - >1 (-) 19 (-) >0.05
rs41305634 chr1:67241476 TCTEX1D1 C - 13 A vs. G 0.017 (A) - >1 (-) 20 (-) >0.05
rs115984783 chr1:67050782 SGIP1 C - 9 T vs. C 0.008 (T) - <1 (-) 0 (-) >0.05
rs6693644 chr1:66990824 SGIP1 [-8242bp] C - 11 A vs. G 0.425 (A) 0.308 (A) >1 (-) 0 (-) >0.05
rs6703606 chr1:67134281 SGIP1 C - 12 A vs. G 0.083 (G) 0.067 (G) >1 (-) 2 (-) >0.05
rs75112499 chr1:67237822 TCTEX1D1 C - 13 A vs. G 0.017 (A) - >1 (-) 18 (-) >0.05
rs114344207 chr1:67102608 SGIP1 C - 13 A vs. G 0.017 (A) - >1 (-) 0 (-) >0.05
rs116554948 chr1:67108088 SGIP1 C - 3 A vs. G 0.008 (A) - <1 (-) 0 (-) >0.05
rs74087614 chr1:67262230 INSL5 [-1194bp] C - 6 T vs. C - - <1 (-) 0 (-) >0.05
rs114581560 chr1:67000935 SGIP1 C - 10 T vs. G 0.025 (T) - >1 (-) 43 (-) >0.05
rs72916320 chr1:67011400 SGIP1 C - 13 T vs. G 0.158 (T) 0.367 (T) <1 (-) 0 (-) >0.05
rs12037595 chr1:66963186 SGIP1 [-35880bp] C - 13 T vs. C 0.125 (T) 0.325 (T) >1 (-) 0 (-) >0.05
rs10493413 chr1:67129746 SGIP1 C - 13 A vs. T 0.083 (T) 0.067 (T) <1 (-) 33 (-) >0.05
rs523544 chr1:67203356 SGIP1 C - 13 T vs. C 0.258 (T) 0.233 (C) <1 (-) 0 (-) >0.05
rs78578323 chr1:67110887 SGIP1 C - 11 T vs. C 0.033 (C) - >1 (-) 22 (-) >0.05
rs12145286 chr1:67073031 SGIP1 C - 11 A vs. G 0.017 (G) - <1 (-) 0 (-) >0.05
rs7529239 chr1:66958259 SGIP1 [-40807bp] C - 13 T vs. C 0.017 (T) 0.008 (T) <1 (-) 33 (-) >0.05
rs1315210 chr1:67202242 SGIP1 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs142507421 chr1:67231138 TCTEX1D1 C - 13 A vs. G - - <1 (-) 17 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.