SGIP1, chr1:66999066-67213982 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs141167995 chr1:66978205 SGIP1 [-20861bp] C - 12 A vs. G - - >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs6679379 chr1:67199156 SGIP1 C - 13 T vs. C 0.325 (T) 0.225 (T) <1 (-) 24 (-) <0.05
rs6682534 chr1:67166666 SGIP1 C - 13 T vs. C 0.417 (C) 0.317 (T) >1 (-) 12 (-) <0.05
rs12127199 chr1:67103742 SGIP1 C - 13 T vs. C 0.467 (C) 0.5 (C) >1 (-) 9 (-) <0.05
rs2483705 chr1:67191180 SGIP1 C - 13 C vs. G 0.417 (G) - <1 (-) 0 (-) <0.05
rs2872079 chr1:67130071 SGIP1 C - 13 A vs. G 0.467 (A) 0.492 (A) <1 (-) 3 (-) <0.05
rs12138266 chr1:67200083 SGIP1 C - 13 A vs. T 0.342 (A) 0.217 (A) <1 (-) 25 (-) <0.05
rs524114 chr1:67188335 SGIP1 C - 13 A vs. G 0.417 (A) - >1 (-) 0 (-) <0.05
rs11208957 chr1:67257871 INSL5 [-5553bp] C - 13 T vs. C 0.5 (T) 0.325 (T) >1 (-) 34 (-) <0.05
rs523956 chr1:67188276 SGIP1 C - 13 T vs. C 0.417 (C) - <1 (-) 0 (-) <0.05
rs6588216 chr1:67145847 SGIP1 C - 13 A vs. G 0.35 (G) 0.192 (G) >1 (-) 21 (-) <0.05
rs536410 chr1:67191084 SGIP1 C - 13 T vs. C 0.417 (C) 0.008 (C) <1 (-) 0 (-) <0.05
rs11208950 chr1:67166011 SGIP1 C - 13 A vs. G - - >1 (-) 12 (-) <0.05
rs693272 chr1:67221552 TCTEX1D1 C - 13 A vs. G 0.4 (G) - <1 (-) 0 (-) <0.05
rs1280313 chr1:67208185 SGIP1 C - 13 T vs. C - - >1 (-) 0 (-) <0.05
rs11811699 chr1:67143760 SGIP1 C - 13 A vs. G 0.35 (G) 0.192 (G) >1 (-) 22 (-) <0.05
rs492109 chr1:67187133 SGIP1 C - 13 A vs. C 0.417 (A) - >1 (-) 0 (-) <0.05
rs11208889 chr1:66975548 SGIP1 [-23518bp] C - 13 T vs. C 0.092 (T) - <1 (-) 0 (-) <0.05
rs11208888 chr1:66975546 SGIP1 [-23520bp] C - 13 A vs. T 0.092 (A) - <1 (-) 0 (-) <0.05
rs1325268 chr1:67160981 SGIP1 C - 13 T vs. C 0.35 (T) 0.175 (T) <1 (-) 33 (-) <0.05
rs1280280 chr1:67173903 SGIP1 C - 13 A vs. G 0.425 (G) 0.0 (G) <1 (-) 0 (-) <0.05
rs502690 chr1:67182403 SGIP1 C - 13 A vs. T 0.425 (A) 0.008 (A) >1 (-) 0 (-) <0.05
rs499263 chr1:67179937 SGIP1 C - 13 T vs. C 0.425 (T) 0.0 (T) >1 (-) 0 (-) <0.05
rs602513 chr1:67177270 SGIP1 C - 13 A vs. G 0.417 (G) 0.0 (G) <1 (-) 0 (-) <0.05
rs618093 chr1:67178428 SGIP1 C - 13 T vs. G 0.417 (T) - >1 (-) 0 (-) <0.05
rs659291 chr1:67180746 SGIP1 C - 13 A vs. C 0.417 (A) 0.0 (A) >1 (-) 0 (-) <0.05
rs523188 chr1:67174422 SGIP1 C - 13 A vs. G 0.417 (A) 0.008 (A) >1 (-) 0 (-) <0.05
rs523132 chr1:67174440 SGIP1 C - 13 A vs. G 0.417 (G) 0.008 (G) <1 (-) 0 (-) <0.05
rs665319 chr1:67175488 SGIP1 C - 13 A vs. G 0.417 (A) 0.0 (A) >1 (-) 0 (-) <0.05
rs10889646 chr1:67152165 SGIP1 C - 13 A vs. G 0.15 (A) 0.067 (A) <1 (-) 9 (-) <0.05
rs11811067 chr1:67205722 SGIP1 C - 13 T vs. C 0.358 (C) 0.217 (C) >1 (-) 20 (-) <0.05
rs485521 chr1:67209562 SGIP1 C - 13 T vs. C 0.4 (C) - <1 (-) 0 (-) <0.05
rs2146904 chr1:67160336 SGIP1 C - 13 A vs. G 0.417 (A) 0.008 (A) >1 (-) 0 (-) <0.05
rs6668603 chr1:67171634 SGIP1 C - 13 T vs. C - - <1 (-) 0 (-) <0.05
rs7554101 chr1:67156472 SGIP1 C - 13 T vs. C 0.4 (C) 0.0 (C) <1 (-) 0 (-) <0.05
rs2025594 chr1:67152318 SGIP1 C - 13 C vs. G 0.15 (G) 0.075 (G) >1 (-) 13 (-) <0.05
rs10889645 chr1:67152048 SGIP1 C - 13 A vs. G 0.15 (G) 0.075 (G) >1 (-) 13 (-) <0.05
rs7541249 chr1:67212427 SGIP1 C - 13 T vs. C 0.358 (T) 0.242 (T) <1 (-) 13 (-) <0.05
rs7543667 chr1:67260854 INSL5 [-2570bp] C - 13 A vs. T - - >1 (-) 0 (-) <0.05
rs7533363 chr1:67261079 INSL5 [-2345bp] C - 13 T vs. C 0.292 (C) 0.325 (T) >1 (-) 0 (-) <0.05
rs12138345 chr1:66973617 SGIP1 [-25449bp] C - 13 A vs. C 0.092 (A) - <1 (-) 0 (-) <0.05
rs11208887 chr1:66974603 SGIP1 [-24463bp] C - 13 A vs. G 0.092 (A) - <1 (-) 0 (-) <0.05
rs78851014 chr1:66971464 SGIP1 [-27602bp] C - 13 A vs. G 0.092 (G) - >1 (-) 0 (-) <0.05
rs11208886 chr1:66967965 SGIP1 [-31101bp] C - 13 A vs. G 0.092 (A) - <1 (-) 0 (-) <0.05
rs2121047 chr1:66969954 SGIP1 [-29112bp] C - 13 T vs. C 0.092 (T) - <1 (-) 0 (-) <0.05
rs6663604 chr1:67219536 TCTEX1D1 C - 13 A vs. G 0.35 (A) 0.242 (A) <1 (-) 13 (-) <0.05
rs10889643 chr1:67143368 SGIP1 C - 13 C vs. G 0.408 (G) - <1 (-) 0 (-) <0.05
rs10889642 chr1:67143334 SGIP1 C - 13 T vs. G 0.408 (T) 0.0 (T) >1 (-) 0 (-) <0.05
rs2016093 chr1:67215438 SGIP1 [+1456bp] C - 13 T vs. C 0.375 (C) 0.242 (C) >1 (-) 15 (-) <0.05
rs7542924 chr1:67143055 SGIP1 C - 13 A vs. G 0.408 (G) 0.0 (G) <1 (-) 0 (-) <0.05
rs147179398 chr1:66982734 SGIP1 [-16332bp] C - 11 T vs. C - - >1 (-) 0 (-) <0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.