SGIP1, chr1:66999066-67213982 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs141167995 chr1:66978205 SGIP1 [-20861bp] C - 12 A vs. G - - >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs72676184 chr1:67048562 SGIP1 C - 13 A vs. G 0.033 (A) - >1 (-) 0 (-) >0.05
rs610295 chr1:67202350 SGIP1 C - 13 T vs. G 0.267 (G) 0.233 (T) >1 (-) 0 (-) >0.05
rs562348 chr1:67199999 SGIP1 C - 13 T vs. C 0.25 (C) 0.225 (T) >1 (-) 0 (-) >0.05
rs538659 chr1:67200269 SGIP1 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs1338192 chr1:66975294 SGIP1 [-23772bp] C - 13 A vs. G 0.225 (A) 0.242 (A) <1 (-) 0 (-) >0.05
rs148795361 chr1:67112032 SGIP1 C - 13 A vs. C - - >1 (-) 0 (-) >0.05
rs485122 chr1:67198642 SGIP1 C - 13 T vs. C 0.258 (C) 0.217 (T) >1 (-) 0 (-) >0.05
rs12125653 chr1:66966429 SGIP1 [-32637bp] C - 13 T vs. C 0.242 (C) - >1 (-) 0 (-) >0.05
rs28878898 chr1:67228590 TCTEX1D1 C - 13 A vs. G - - <1 (-) 17 (-) >0.05
rs678253 chr1:67204107 SGIP1 C - 13 A vs. G 0.25 (A) 0.225 (G) <1 (-) 0 (-) >0.05
rs150441947 chr1:67096996 SGIP1 C - 12 C vs. G - - >1 (-) 0 (-) >0.05
rs12026924 chr1:66954671 SGIP1 [-44395bp] C - 13 A vs. T 0.125 (T) 0.367 (T) <1 (-) 0 (-) >0.05
rs609939 chr1:67202296 SGIP1 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs609906 chr1:67202269 SGIP1 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs76975082 chr1:66982374 SGIP1 [-16692bp] C - 6 A vs. G - 0.025 (A) <1 (-) 0 (-) >0.05
rs77503231 chr1:67143879 SGIP1 C - 13 C vs. G 0.033 (G) - <1 (-) 0 (-) >0.05
rs624277 chr1:67203130 SGIP1 C - 13 T vs. C 0.25 (C) 0.225 (T) >1 (-) 0 (-) >0.05
rs151067567 chr1:67103110 SGIP1 C - 12 A vs. C - - <1 (-) 0 (-) >0.05
rs524204 chr1:67203455 SGIP1 C - 13 A vs. G 0.25 (G) 0.225 (A) >1 (-) 0 (-) >0.05
rs693956 chr1:67203574 SGIP1 C - 13 T vs. C 0.25 (T) 0.225 (C) <1 (-) 0 (-) >0.05
rs473470 chr1:67205327 SGIP1 C - 13 T vs. C 0.25 (C) 0.225 (T) >1 (-) 0 (-) >0.05
rs116612823 chr1:67244526 TCTEX1D1 [+56bp] C - 12 A vs. C 0.025 (C) - >1 (-) 17 (-) >0.05
rs4142764 chr1:66959573 SGIP1 [-39493bp] C - 13 T vs. G 0.133 (T) 0.358 (T) >1 (-) 0 (-) >0.05
rs512691 chr1:67197944 SGIP1 C - 13 A vs. G 0.25 (G) 0.217 (A) >1 (-) 0 (-) >0.05
rs61798695 chr1:66965728 SGIP1 [-33338bp] C - 13 T vs. C 0.125 (T) 0.333 (T) >1 (-) 0 (-) >0.05
rs657808 chr1:67209818 SGIP1 C - 13 A vs. G 0.25 (A) 0.242 (G) <1 (-) 0 (-) >0.05
rs1415981 chr1:66957553 SGIP1 [-41513bp] C - 13 T vs. C 0.125 (C) 0.367 (C) <1 (-) 0 (-) >0.05
rs1415982 chr1:66957570 SGIP1 [-41496bp] C - 13 T vs. C 0.125 (T) 0.367 (T) >1 (-) 0 (-) >0.05
rs114168219 chr1:67235639 TCTEX1D1 C - 13 T vs. C 0.017 (C) - <1 (-) 16 (-) >0.05
rs553729 chr1:67204293 SGIP1 C - 13 A vs. G 0.25 (A) 0.225 (G) <1 (-) 0 (-) >0.05
rs114285111 chr1:67241620 TCTEX1D1 C - 13 C vs. G 0.042 (C) - >1 (-) 0 (-) >0.05
rs17129449 chr1:67255176 INSL5 [-8248bp] C - 4 C vs. G - - <1 (-) 0 (-) >0.05
rs12024390 chr1:66955180 SGIP1 [-43886bp] C - 13 T vs. G 0.125 (G) 0.358 (G) <1 (-) 0 (-) >0.05
rs61798663 chr1:66953591 SGIP1 [-45475bp] C - 13 A vs. G 0.125 (A) 0.367 (A) >1 (-) 0 (-) >0.05
rs10889621 chr1:66955699 SGIP1 [-43367bp] C - 13 T vs. C 0.125 (C) 0.367 (C) <1 (-) 0 (-) >0.05
rs2647386 chr1:67202188 SGIP1 C - 6 T vs. C - - >1 (-) 0 (-) >0.05
rs75585417 chr1:67225846 TCTEX1D1 C - 13 T vs. C 0.017 (T) - >1 (-) 16 (-) >0.05
rs114615223 chr1:67226052 TCTEX1D1 C - 12 A vs. T 0.025 (A) - <1 (-) 16 (-) >0.05
rs11208904 chr1:67009377 SGIP1 C - 13 A vs. G 0.108 (A) 0.433 (A) >1 (-) 0 (-) >0.05
rs1020380 chr1:66964245 SGIP1 [-34821bp] C - 13 A vs. G 0.225 (A) 0.267 (A) <1 (-) 0 (-) >0.05
rs487833 chr1:67201738 SGIP1 C - 13 T vs. G 0.25 (G) - >1 (-) 0 (-) >0.05
rs55642041 chr1:66974696 SGIP1 [-24370bp] C - 13 A vs. C 0.125 (A) 0.342 (A) >1 (-) 0 (-) >0.05
rs2378938 chr1:66983172 SGIP1 [-15894bp] C - 13 T vs. G - - >1 (-) 12 (-) >0.05
rs142659625 chr1:67033512 SGIP1 C - 13 A vs. T - - >1 (-) 15 (-) >0.05
rs34987336 chr1:66997340 SGIP1 [-1726bp] C - 12 A vs. T - - <1 (-) 0 (-) >0.05
rs77865213 chr1:67198843 SGIP1 C - 8 A vs. C 0.033 (A) - <1 (-) 0 (-) >0.05
rs2454325 chr1:67186132 SGIP1 C - 13 T vs. C 0.067 (T) 0.317 (T) <1 (-) 0 (-) >0.05
rs61780944 chr1:67217830 TCTEX1D1 [-312bp] C - 11 T vs. G 0.008 (G) - <1 (-) 0 (-) >0.05
rs6701831 chr1:66980886 SGIP1 [-18180bp] C - 13 A vs. C - - <1 (-) 18 (-) >0.05
rs6692318 chr1:67134326 SGIP1 C - 13 T vs. C 0.125 (C) 0.067 (C) >1 (-) 1 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.