SGIP1, chr1:66999066-67213982 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs141167995 chr1:66978205 SGIP1 [-20861bp] C - 12 A vs. G - - >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs116771768 chr1:67170016 SGIP1 C - 3 C vs. G 0.008 (G) - <1 (-) 0 (-) >0.05
rs2454324 chr1:67246693 TCTEX1D1 [+2223bp] C - 8 A vs. G - - <1 (-) 0 (-) >0.05
rs682896 chr1:67186062 SGIP1 C - 12 T vs. C 0.233 (T) 0.192 (C) >1 (-) 0 (-) >0.05
rs17129381 chr1:67186429 SGIP1 C - 12 A vs. T 0.083 (T) 0.5 (T) <1 (-) 0 (-) >0.05
rs2121045 chr1:66975883 SGIP1 [-23183bp] C - 13 A vs. C 0.267 (A) 0.375 (A) >1 (-) 16 (-) >0.05
rs2121043 chr1:66976645 SGIP1 [-22421bp] C - 13 A vs. G 0.125 (A) 0.333 (A) >1 (-) 0 (-) >0.05
rs147390565 chr1:66949916 SGIP1 [-49150bp] C - 11 T vs. C - - >1 (-) 0 (-) >0.05
rs151265843 chr1:67018797 SGIP1 C - 5 T vs. C - - <1 (-) 0 (-) >0.05
rs12756331 chr1:66985112 SGIP1 [-13954bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs12035546 chr1:67166991 SGIP1 C - 13 T vs. C 0.083 (T) 0.5 (T) >1 (-) 0 (-) >0.05
rs138994082 chr1:67055315 SGIP1 C - 7 A vs. G - - <1 (-) 12 (-) >0.05
rs520717 chr1:67256885 INSL5 [-6539bp] C - 12 A vs. G 0.067 (G) - <1 (-) 16 (-) >0.05
rs76149537 chr1:67182647 SGIP1 C - 12 T vs. C 0.042 (T) - >1 (-) 23 (-) >0.05
rs139634344 chr1:67022009 SGIP1 C - 3 C vs. G - - <1 (-) 0 (-) >0.05
rs1408852 chr1:67155328 SGIP1 C - 13 T vs. C 0.233 (C) 0.192 (T) <1 (-) 0 (-) >0.05
rs74435663 chr1:66998764 SGIP1 [-302bp] C - 13 T vs. C 0.142 (C) 0.325 (C) >1 (-) 32 (-) >0.05
rs7529763 chr1:67164562 SGIP1 C - 13 T vs. G 0.158 (G) 0.308 (G) <1 (-) 0 (-) >0.05
rs12035592 chr1:67167119 SGIP1 C - 13 T vs. C 0.083 (T) 0.5 (T) >1 (-) 0 (-) >0.05
rs141522885 chr1:67196306 SGIP1 C - 3 T vs. C - - <1 (-) 0 (-) >0.05
rs489300 chr1:67175840 SGIP1 C - 13 T vs. C 0.233 (C) 0.192 (T) <1 (-) 0 (-) >0.05
rs4564115 chr1:66952503 SGIP1 [-46563bp] C - 13 T vs. G - - >1 (-) 0 (-) >0.05
rs12029896 chr1:67163372 SGIP1 C - 13 A vs. G 0.15 (G) 0.308 (G) <1 (-) 0 (-) >0.05
rs2121053 chr1:66988499 SGIP1 [-10567bp] C - 13 A vs. C 0.15 (C) 0.458 (C) <1 (-) 0 (-) >0.05
rs11208949 chr1:67159658 SGIP1 C - 13 A vs. G 0.15 (A) 0.308 (A) >1 (-) 0 (-) >0.05
rs566057 chr1:67182636 SGIP1 C - 13 T vs. C 0.15 (C) 0.308 (C) <1 (-) 0 (-) >0.05
rs609707 chr1:67176983 SGIP1 C - 13 T vs. C 0.15 (C) 0.308 (C) <1 (-) 0 (-) >0.05
rs531378 chr1:67181162 SGIP1 C - 13 T vs. C 0.15 (T) 0.308 (T) >1 (-) 0 (-) >0.05
rs79682748 chr1:66989719 SGIP1 [-9347bp] C - 9 A vs. G 0.033 (G) - >1 (-) 0 (-) >0.05
rs60359689 chr1:67096743 SGIP1 C - 6 A vs. G - - >1 (-) 44 (-) >0.05
rs72669499 chr1:67165455 SGIP1 C - 9 T vs. C 0.025 (C) - <1 (-) 0 (-) >0.05
rs12568801 chr1:66996599 SGIP1 [-2467bp] C - 13 A vs. G - - >1 (-) 30 (-) >0.05
rs61798708 chr1:67148009 SGIP1 C - 13 A vs. G - - >1 (-) 12 (-) >0.05
rs12563682 chr1:67167350 SGIP1 C - 13 A vs. C 0.15 (C) 0.317 (C) <1 (-) 0 (-) >0.05
rs10493407 chr1:66991699 SGIP1 [-7367bp] C - 13 T vs. G 0.275 (G) 0.233 (T) <1 (-) 0 (-) >0.05
rs144355580 chr1:67065595 SGIP1 C - 3 A vs. T - - >1 (-) 0 (-) >0.05
rs4596853 chr1:66981760 SGIP1 [-17306bp] C - 13 T vs. C 0.108 (T) 0.342 (T) >1 (-) 0 (-) >0.05
rs587125 chr1:67176131 SGIP1 C - 13 A vs. G 0.15 (G) 0.308 (G) <1 (-) 0 (-) >0.05
rs148126937 chr1:67234091 TCTEX1D1 C - 10 A vs. G - - >1 (-) 0 (-) >0.05
rs1338206 chr1:66994182 SGIP1 [-4884bp] C - 13 A vs. G 0.117 (A) 0.308 (A) >1 (-) 0 (-) >0.05
rs12043594 chr1:66992833 SGIP1 [-6233bp] C - 13 A vs. G 0.125 (G) 0.308 (G) <1 (-) 0 (-) >0.05
rs17128967 chr1:66955632 SGIP1 [-43434bp] C - 13 A vs. C 0.367 (C) - <1 (-) 18 (-) >0.05
rs138465667 chr1:67080656 SGIP1 C - 13 A vs. C - - <1 (-) 5 (-) >0.05
rs1338202 chr1:66992555 SGIP1 [-6511bp] C - 13 T vs. C 0.108 (T) 0.317 (T) >1 (-) 0 (-) >0.05
rs6676873 chr1:66980223 SGIP1 [-18843bp] C - 13 A vs. T 0.375 (T) 0.033 (T) >1 (-) 21 (-) >0.05
rs7532400 chr1:66998436 SGIP1 [-630bp] C - 13 A vs. C 0.133 (A) 0.317 (A) <1 (-) 27 (-) >0.05
rs115716736 chr1:67060348 SGIP1 C - 6 A vs. G 0.008 (A) - <1 (-) 39 (-) >0.05
rs1338201 chr1:66992485 SGIP1 [-6581bp] C - 13 T vs. C 0.125 (T) 0.308 (T) >1 (-) 0 (-) >0.05
rs76463369 chr1:67095896 SGIP1 C - 10 T vs. C 0.008 (T) - <1 (-) 20 (-) >0.05
rs6699568 chr1:66997958 SGIP1 [-1108bp] C - 13 A vs. G 0.133 (G) 0.317 (G) >1 (-) 25 (-) >0.05
rs116241558 chr1:67041978 SGIP1 C - 6 T vs. C 0.008 (C) - >1 (-) 39 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.