SGIP1, chr1:66999066-67213982 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs141167995 chr1:66978205 SGIP1 [-20861bp] C - 12 A vs. G - - >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs12563606 chr1:66964824 SGIP1 [-34242bp] C - 13 T vs. C 0.483 (C) 0.367 (C) <1 (-) 35 (-) >0.05
rs56400812 chr1:66994716 SGIP1 [-4350bp] C - 7 T vs. C - - >1 (-) 46 (-) >0.05
rs7526187 chr1:66966565 SGIP1 [-32501bp] C - 13 T vs. C 0.475 (T) 0.375 (T) >1 (-) 34 (-) >0.05
rs148863798 chr1:67158698 SGIP1 C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs115733626 chr1:67051662 SGIP1 C - 4 A vs. G 0.008 (A) - >1 (-) 0 (-) >0.05
rs10493408 chr1:66992054 SGIP1 [-7012bp] C - 13 A vs. C 0.125 (A) 0.308 (A) >1 (-) 0 (-) >0.05
rs475762 chr1:67213426 SGIP1 C - 13 A vs. G 0.15 (G) 0.3 (G) >1 (-) 11 (-) >0.05
rs665379 chr1:67212069 SGIP1 C - 13 T vs. C 0.167 (T) 0.3 (T) >1 (-) 11 (-) >0.05
rs1338199 chr1:66991675 SGIP1 [-7391bp] C - 13 T vs. C 0.125 (T) 0.308 (T) >1 (-) 0 (-) >0.05
rs6690227 chr1:66989884 SGIP1 [-9182bp] C - 13 A vs. C 0.275 (C) 0.225 (A) <1 (-) 0 (-) >0.05
rs6689119 chr1:66994729 SGIP1 [-4337bp] C - 13 A vs. G 0.125 (G) 0.308 (G) <1 (-) 0 (-) >0.05
rs11208905 chr1:67013055 SGIP1 C - 13 A vs. G 0.108 (G) 0.433 (G) <1 (-) 0 (-) >0.05
rs6661985 chr1:66981098 SGIP1 [-17968bp] C - 13 A vs. C 0.475 (C) 0.375 (C) >1 (-) 28 (-) >0.05
rs12565436 chr1:67161638 SGIP1 C - 13 T vs. C 0.083 (T) 0.5 (T) >1 (-) 0 (-) >0.05
rs17471563 chr1:66955025 SGIP1 [-44041bp] C - 13 T vs. C 0.35 (C) 0.058 (C) <1 (-) 16 (-) >0.05
rs12128148 chr1:67171512 SGIP1 C - 10 A vs. G - - <1 (-) 14 (-) >0.05
rs114993522 chr1:66986489 SGIP1 [-12577bp] C - 6 A vs. C 0.017 (A) - <1 (-) 14 (-) >0.05
rs12135213 chr1:66991390 SGIP1 [-7676bp] C - 13 T vs. C 0.125 (C) 0.467 (C) <1 (-) 0 (-) >0.05
rs36174823 chr1:66950398 SGIP1 [-48668bp] C - 9 T vs. G - - <1 (-) 0 (-) >0.05
rs147992786 chr1:67060961 SGIP1 C - 5 A vs. G - - >1 (-) 0 (-) >0.05
rs36142763 chr1:66950368 SGIP1 [-48698bp] C - 9 T vs. C - - <1 (-) 0 (-) >0.05
rs12024358 chr1:66994327 SGIP1 [-4739bp] C - 13 T vs. C 0.15 (T) 0.467 (T) >1 (-) 0 (-) >0.05
rs1853772 chr1:67173760 SGIP1 C - 12 A vs. G 0.083 (G) 0.5 (G) >1 (-) 0 (-) >0.05
rs12563876 chr1:66967784 SGIP1 [-31282bp] C - 13 A vs. C 0.492 (C) 0.367 (C) <1 (-) 33 (-) >0.05
rs35886191 chr1:67151859 SGIP1 C - 13 A vs. T 0.233 (T) 0.2 (A) <1 (-) 0 (-) >0.05
rs2761193 chr1:67202161 SGIP1 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs1325267 chr1:67160814 SGIP1 C - 13 T vs. C 0.083 (T) 0.5 (T) >1 (-) 0 (-) >0.05
rs200068872 chr1:66995018 SGIP1 [-4048bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs7533806 chr1:66986715 SGIP1 [-12351bp] C - 13 A vs. G 0.125 (G) 0.308 (G) <1 (-) 0 (-) >0.05
rs7533837 chr1:66986781 SGIP1 [-12285bp] C - 13 A vs. G 0.125 (G) 0.308 (G) <1 (-) 0 (-) >0.05
rs12031054 chr1:67106825 SGIP1 C - 13 A vs. G 0.242 (A) 0.183 (G) <1 (-) 0 (-) >0.05
rs72934153 chr1:66998785 SGIP1 [-281bp] C - 13 T vs. G 0.133 (T) 0.325 (T) <1 (-) 23 (-) >0.05
rs6689313 chr1:66994889 SGIP1 [-4177bp] C - 13 A vs. C 0.125 (C) 0.308 (C) <1 (-) 0 (-) >0.05
rs79154999 chr1:67176116 SGIP1 C - 12 T vs. C 0.042 (C) - <1 (-) 33 (-) >0.05
rs12740289 chr1:67100105 SGIP1 C - 13 T vs. C 0.242 (T) 0.183 (C) >1 (-) 0 (-) >0.05
rs61798696 chr1:66971952 SGIP1 [-27114bp] C - 13 T vs. C 0.367 (T) 0.033 (T) <1 (-) 22 (-) >0.05
rs12740141 chr1:67100104 SGIP1 C - 13 A vs. G 0.25 (G) 0.175 (A) <1 (-) 0 (-) >0.05
rs1415980 chr1:66957459 SGIP1 [-41607bp] C - 13 A vs. T 0.367 (A) 0.033 (A) <1 (-) 26 (-) >0.05
rs4655630 chr1:67054408 SGIP1 C - 13 A vs. G 0.317 (A) 0.367 (G) <1 (-) 24 (-) >0.05
rs56219542 chr1:67202134 SGIP1 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs1856321 chr1:66959465 SGIP1 [-39601bp] C - 13 A vs. G 0.367 (A) 0.033 (A) <1 (-) 26 (-) >0.05
rs11208896 chr1:66988047 SGIP1 [-11019bp] C - 13 A vs. G 0.125 (A) 0.308 (A) <1 (-) 0 (-) >0.05
rs10889647 chr1:67154496 SGIP1 C - 13 A vs. T 0.233 (A) 0.192 (T) >1 (-) 0 (-) >0.05
rs1415979 chr1:66957311 SGIP1 [-41755bp] C - 13 T vs. G 0.35 (G) - >1 (-) 26 (-) >0.05
rs61798693 chr1:66964282 SGIP1 [-34784bp] C - 13 T vs. C 0.367 (C) - >1 (-) 23 (-) >0.05
rs17432225 chr1:66974214 SGIP1 [-24852bp] C - 13 A vs. G 0.367 (A) 0.025 (A) <1 (-) 24 (-) >0.05
rs4655634 chr1:67067217 SGIP1 C - 13 A vs. T 0.317 (T) 0.408 (A) >1 (-) 18 (-) >0.05
rs6666170 chr1:66959680 SGIP1 [-39386bp] C - 13 A vs. G 0.367 (A) 0.033 (A) <1 (-) 26 (-) >0.05
rs141756053 chr1:67241623 TCTEX1D1 C - 7 T vs. C - - >1 (-) 0 (-) >0.05
rs4655617 chr1:67010654 SGIP1 C - 13 A vs. C 0.417 (C) 0.175 (A) >1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.