TCTEX1D1, chr1:67218142-67244470 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11208951 chr1:67188107 SGIP1 C - 13 T vs. C 0.35 (T) 0.183 (T) <1 (-) 30 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs6668603 chr1:67171634 SGIP1 C - 13 T vs. C - - <1 (-) 0 (-) <0.05
rs7541249 chr1:67212427 SGIP1 C - 13 T vs. C 0.358 (T) 0.242 (T) <1 (-) 13 (-) <0.05
rs7543667 chr1:67260854 INSL5 [-2570bp] C - 13 A vs. T - - >1 (-) 0 (-) <0.05
rs7533363 chr1:67261079 INSL5 [-2345bp] C - 13 T vs. C 0.292 (C) 0.325 (T) >1 (-) 0 (-) <0.05
rs525393 chr1:67274795 WDR78 [-3773bp] C - 13 C vs. G 0.292 (C) 0.308 (G) <1 (-) 0 (-) <0.05
rs12062643 chr1:67271266 INSL5 [+4327bp] C - 13 T vs. C - - <1 (-) 0 (-) <0.05
rs12568986 chr1:67273323 WDR78 [-5245bp] C - 13 A vs. G 0.292 (G) 0.333 (A) >1 (-) 0 (-) <0.05
rs6663604 chr1:67219536 TCTEX1D1 C - 13 A vs. G 0.35 (A) 0.242 (A) <1 (-) 13 (-) <0.05
rs2016093 chr1:67215438 SGIP1 [+1456bp] C - 13 T vs. C 0.375 (C) 0.242 (C) >1 (-) 15 (-) <0.05
rs56107937 chr1:67260398 INSL5 [-3026bp] C - 13 A vs. G - - <1 (-) 0 (-) <0.05
rs55899951 chr1:67260378 INSL5 [-3046bp] C - 13 A vs. C - - >1 (-) 0 (-) <0.05
rs2274987 chr1:67221387 TCTEX1D1 C - 13 T vs. C 0.35 (C) 0.258 (C) >1 (-) 15 (-) <0.05
rs12059355 chr1:67223764 TCTEX1D1 C - 13 C vs. G 0.35 (C) 0.275 (C) <1 (-) 30 (-) <0.05
rs664533 chr1:67224535 TCTEX1D1 C - 13 T vs. C 0.233 (C) - <1 (-) 34 (-) <0.05
rs2839920 chr1:67270512 INSL5 [+3573bp] C - 13 A vs. T 0.075 (A) 0.233 (A) <1 (-) 6 (-) <0.05
rs1966009 chr1:67280261 WDR78 C - 13 T vs. C - - >1 (-) 0 (-) <0.05
rs472181 chr1:67226031 TCTEX1D1 C - 13 A vs. G 0.417 (G) 0.4 (G) <1 (-) 0 (-) <0.05
rs140450674 chr1:67195632 SGIP1 C - 13 T vs. C - - <1 (-) 0 (-) <0.05
rs147939315 chr1:67269997 INSL5 [+3058bp] C - 7 T vs. C - - >1 (-) 11 (-) <0.05
rs2133172 chr1:67243252 TCTEX1D1 C - 13 A vs. G 0.142 (A) 0.092 (A) <1 (-) 5 (-) <0.05
rs609219 chr1:67176846 SGIP1 C - 13 T vs. C 0.208 (C) 0.0 (C) <1 (-) 22 (-) <0.05
rs138904683 chr1:67282934 WDR78 C - 3 A vs. C - - >1 (-) 32 (-) <0.05
rs569827 chr1:67191687 SGIP1 C - 13 T vs. C 0.208 (T) - >1 (-) 23 (-) >0.05
rs471093 chr1:67242571 TCTEX1D1 C - 13 A vs. G 0.417 (A) 0.392 (A) >1 (-) 0 (-) >0.05
rs9988483 chr1:67196286 SGIP1 C - 13 A vs. G 0.208 (A) - >1 (-) 20 (-) >0.05
rs17440885 chr1:67208622 SGIP1 C - 13 A vs. G 0.05 (G) - <1 (-) 3 (-) >0.05
rs12080201 chr1:67268953 INSL5 [+2014bp] C - 13 A vs. G 0.075 (A) 0.242 (A) <1 (-) 0 (-) >0.05
rs149983168 chr1:67272439 INSL5 [+5500bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs72671661 chr1:67273367 WDR78 [-5201bp] C - 13 T vs. C 0.075 (C) 0.242 (C) >1 (-) 0 (-) >0.05
rs79575824 chr1:67188039 SGIP1 C - 13 T vs. C 0.017 (T) - >1 (-) 0 (-) >0.05
rs491854 chr1:67207598 SGIP1 C - 13 A vs. C - - >1 (-) 15 (-) >0.05
rs604737 chr1:67209088 SGIP1 C - 13 A vs. G 0.208 (A) - >1 (-) 15 (-) >0.05
rs547926 chr1:67207891 SGIP1 C - 13 A vs. T 0.208 (T) - <1 (-) 15 (-) >0.05
rs115264046 chr1:67241771 TCTEX1D1 C - 5 A vs. G 0.017 (G) - >1 (-) 0 (-) >0.05
rs7548496 chr1:67239576 TCTEX1D1 C - 13 C vs. G 0.433 (G) 0.258 (G) >1 (-) 0 (-) >0.05
rs56053714 chr1:67253855 TCTEX1D1 [+9385bp] C - 13 A vs. G 0.475 (A) 0.25 (A) <1 (-) 0 (-) >0.05
rs150029857 chr1:67276724 WDR78 [-1844bp] C - 3 A vs. T - - <1 (-) 0 (-) >0.05
rs7530545 chr1:67228504 TCTEX1D1 C - 13 A vs. G 0.475 (A) 0.25 (A) <1 (-) 0 (-) >0.05
rs112746841 chr1:67276297 WDR78 [-2271bp] C - 12 T vs. G 0.058 (G) - <1 (-) 10 (-) >0.05
rs501193 chr1:67187996 SGIP1 C - 11 A vs. G 0.008 (A) - >1 (-) 0 (-) >0.05
rs78035297 chr1:67211200 SGIP1 C - 13 T vs. C 0.167 (T) - <1 (-) 0 (-) >0.05
rs1391547 chr1:67231916 TCTEX1D1 C - 13 T vs. C 0.492 (T) 0.258 (T) <1 (-) 0 (-) >0.05
rs6588219 chr1:67244603 TCTEX1D1 [+133bp] C - 13 T vs. C 0.492 (T) 0.258 (T) <1 (-) 0 (-) >0.05
rs12136932 chr1:67255546 INSL5 [-7878bp] C - 13 A vs. G 0.483 (G) 0.175 (G) >1 (-) 0 (-) >0.05
rs75019572 chr1:67173686 SGIP1 C - 13 T vs. C 0.025 (T) - >1 (-) 0 (-) >0.05
rs144433735 chr1:67242362 TCTEX1D1 C - 7 A vs. C - - <1 (-) 0 (-) >0.05
rs79709915 chr1:67281977 WDR78 C - 12 T vs. C 0.092 (T) 0.233 (T) <1 (-) 0 (-) >0.05
rs17440989 chr1:67211323 SGIP1 C - 13 A vs. G 0.2 (G) - <1 (-) 0 (-) >0.05
rs72922021 chr1:67207684 SGIP1 C - 13 T vs. C 0.15 (T) - >1 (-) 0 (-) >0.05
rs559809 chr1:67262748 INSL5 [-676bp] C - 13 A vs. G 0.217 (A) 0.425 (A) <1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.