TCTEX1D1, chr1:67218142-67244470 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11208951 chr1:67188107 SGIP1 C - 13 T vs. C 0.35 (T) 0.183 (T) <1 (-) 30 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs75066779 chr1:67204044 SGIP1 C - 7 T vs. C 0.008 (T) - >1 (-) 0 (-) >0.05
rs1931295 chr1:67264982 INSL5 C - 13 T vs. C 0.217 (C) 0.442 (C) >1 (-) 0 (-) >0.05
rs74383026 chr1:67252467 TCTEX1D1 [+7997bp] C - 8 A vs. T 0.042 (T) - <1 (-) 0 (-) >0.05
chr1:67288993 chr1:67288993 WDR78 C - 10 A vs. G - - <1 (-) 24 (-) >0.05
rs9659043 chr1:67268516 INSL5 [+1577bp] C - 13 C vs. G 0.392 (G) - <1 (-) 49 (-) >0.05
rs11208960 chr1:67269935 INSL5 [+2996bp] C - 13 T vs. C 0.392 (T) - >1 (-) 49 (-) >0.05
rs7512537 chr1:67248066 TCTEX1D1 [+3596bp] C - 13 C vs. G - - >1 (-) 0 (-) >0.05
rs11809759 chr1:67269905 INSL5 [+2966bp] C - 13 A vs. G 0.392 (G) - <1 (-) 49 (-) >0.05
rs144101221 chr1:67205851 SGIP1 C - 7 T vs. G - - >1 (-) 0 (-) >0.05
rs12744712 chr1:67280252 WDR78 C - 13 T vs. C - - <1 (-) 41 (-) >0.05
rs12083275 chr1:67271154 INSL5 [+4215bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs6659634 chr1:67251962 TCTEX1D1 [+7492bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs34089513 chr1:67245997 TCTEX1D1 [+1527bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs7515848 chr1:67188829 SGIP1 C - 13 A vs. G 0.208 (A) - >1 (-) 3 (-) >0.05
rs149003579 chr1:67250607 TCTEX1D1 [+6137bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs75226137 chr1:67180508 SGIP1 C - 8 A vs. G - - <1 (-) 0 (-) >0.05
rs72671621 chr1:67190274 SGIP1 C - 13 A vs. T 0.208 (T) - <1 (-) 4 (-) >0.05
rs6667287 chr1:67250793 TCTEX1D1 [+6323bp] C - 13 C vs. G - - <1 (-) 0 (-) >0.05
rs17129365 chr1:67174554 SGIP1 C - 13 A vs. G 0.2 (G) - <1 (-) 0 (-) >0.05
rs17441669 chr1:67232431 TCTEX1D1 C - 12 A vs. T 0.2 (A) 0.167 (A) <1 (-) 0 (-) >0.05
rs6686986 chr1:67252247 TCTEX1D1 [+7777bp] C - 13 A vs. G 0.2 (A) 0.167 (A) <1 (-) 0 (-) >0.05
rs11800188 chr1:67287174 WDR78 C - 13 A vs. G 0.317 (G) 0.142 (G) <1 (-) 37 (-) >0.05
rs17129478 chr1:67288443 WDR78 C - 13 T vs. G 0.092 (G) 0.225 (G) >1 (-) 2 (-) >0.05
rs75645971 chr1:67287486 WDR78 C - 13 T vs. C 0.092 (T) 0.225 (T) <1 (-) 2 (-) >0.05
rs17442361 chr1:67255229 INSL5 [-8195bp] C - 13 T vs. C 0.2 (C) 0.15 (C) >1 (-) 0 (-) >0.05
rs146114355 chr1:67192191 SGIP1 C - 12 A vs. G - - >1 (-) 25 (-) >0.05
rs7550905 chr1:67280515 WDR78 C - 13 A vs. G 0.058 (A) 0.242 (A) <1 (-) 0 (-) >0.05
rs80251221 chr1:67207764 SGIP1 C - 7 A vs. G - - <1 (-) 0 (-) >0.05
rs146856578 chr1:67266824 INSL5 C - 11 A vs. T - - <1 (-) 0 (-) >0.05
rs17129469 chr1:67281402 WDR78 C - 13 T vs. C 0.092 (C) 0.233 (C) >1 (-) 0 (-) >0.05
rs6588218 chr1:67232390 TCTEX1D1 C - 13 T vs. C 0.275 (T) 0.083 (T) <1 (-) 0 (-) >0.05
rs504169 chr1:67222697 TCTEX1D1 C - 13 T vs. C 0.217 (T) 0.292 (C) <1 (-) 0 (-) >0.05
rs144529945 chr1:67264347 INSL5 C - 12 A vs. T - - >1 (-) 0 (-) >0.05
rs78658001 chr1:67214089 SGIP1 [+107bp] C - 13 A vs. G 0.025 (A) - >1 (-) 0 (-) >0.05
rs35930658 chr1:67262546 INSL5 [-878bp] C - 13 A vs. G 0.325 (A) - >1 (-) 36 (-) >0.05
rs17440390 chr1:67190563 SGIP1 C - 13 T vs. C 0.2 (T) - <1 (-) 0 (-) >0.05
rs12408354 chr1:67261066 INSL5 [-2358bp] C - 13 A vs. C 0.325 (C) - <1 (-) 39 (-) >0.05
rs506778 chr1:67222934 TCTEX1D1 C - 13 T vs. C 0.217 (T) 0.275 (C) <1 (-) 0 (-) >0.05
rs68045184 chr1:67253884 TCTEX1D1 [+9414bp] C - 13 T vs. C 0.2 (C) 0.167 (C) >1 (-) 0 (-) >0.05
rs10493417 chr1:67238697 TCTEX1D1 C - 13 A vs. T 0.2 (A) 0.167 (A) <1 (-) 0 (-) >0.05
rs7525761 chr1:67239346 TCTEX1D1 C - 13 A vs. G 0.208 (G) 0.167 (G) >1 (-) 0 (-) >0.05
rs7515248 chr1:67239462 TCTEX1D1 C - 13 T vs. C 0.208 (C) 0.167 (C) >1 (-) 0 (-) >0.05
rs2270702 chr1:67235946 TCTEX1D1 C - 13 A vs. G 0.2 (G) 0.167 (G) >1 (-) 0 (-) >0.05
rs12733829 chr1:67236874 TCTEX1D1 C - 13 A vs. C 0.208 (A) 0.167 (A) <1 (-) 0 (-) >0.05
rs1060575 chr1:67236097 TCTEX1D1 C - 13 A vs. T 0.2 (T) 0.167 (T) >1 (-) 0 (-) >0.05
rs1566246 chr1:67245275 TCTEX1D1 [+805bp] C - 11 A vs. G 0.275 (A) 0.092 (A) <1 (-) 0 (-) >0.05
rs1909184 chr1:67236488 TCTEX1D1 C - 13 A vs. C 0.2 (C) 0.167 (C) >1 (-) 0 (-) >0.05
rs10493416 chr1:67236723 TCTEX1D1 C - 13 A vs. C 0.2 (C) 0.167 (C) >1 (-) 0 (-) >0.05
rs11208953 chr1:67237393 TCTEX1D1 C - 13 C vs. G 0.2 (G) 0.167 (G) >1 (-) 0 (-) >0.05
rs528518 chr1:67225356 TCTEX1D1 C - 13 A vs. G 0.275 (A) 0.467 (A) <1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.