TCTEX1D1, chr1:67218142-67244470 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11208951 chr1:67188107 SGIP1 C - 13 T vs. C 0.35 (T) 0.183 (T) <1 (-) 30 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs76074683 chr1:67175574 SGIP1 C - 13 A vs. G 0.025 (A) - <1 (-) 46 (-) >0.05
rs142602441 chr1:67245876 TCTEX1D1 [+1406bp] C - 13 T vs. C - - >1 (-) 44 (-) >0.05
rs75300309 chr1:67227280 TCTEX1D1 C - 6 A vs. G 0.017 (G) - >1 (-) 37 (-) >0.05
rs139966011 chr1:67291026 WDR78 C - 13 A vs. C - - <1 (-) 0 (-) >0.05
rs1874802 chr1:67239891 TCTEX1D1 C - 13 T vs. C 0.017 (T) - >1 (-) 19 (-) >0.05
rs41305634 chr1:67241476 TCTEX1D1 C - 13 A vs. G 0.017 (A) - >1 (-) 20 (-) >0.05
rs75112499 chr1:67237822 TCTEX1D1 C - 13 A vs. G 0.017 (A) - >1 (-) 18 (-) >0.05
rs74087614 chr1:67262230 INSL5 [-1194bp] C - 6 T vs. C - - <1 (-) 0 (-) >0.05
rs77931172 chr1:67266170 INSL5 C - 13 T vs. C 0.058 (C) - <1 (-) 11 (-) >0.05
rs523544 chr1:67203356 SGIP1 C - 13 T vs. C 0.258 (T) 0.233 (C) <1 (-) 0 (-) >0.05
rs17442592 chr1:67267242 INSL5 [+303bp] C - 13 A vs. T 0.058 (A) - >1 (-) 10 (-) >0.05
rs145062453 chr1:67267978 INSL5 [+1039bp] C - 13 T vs. C - - >1 (-) 10 (-) >0.05
rs1315210 chr1:67202242 SGIP1 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs142507421 chr1:67231138 TCTEX1D1 C - 13 A vs. G - - <1 (-) 17 (-) >0.05
rs610295 chr1:67202350 SGIP1 C - 13 T vs. G 0.267 (G) 0.233 (T) >1 (-) 0 (-) >0.05
rs562348 chr1:67199999 SGIP1 C - 13 T vs. C 0.25 (C) 0.225 (T) >1 (-) 0 (-) >0.05
rs538659 chr1:67200269 SGIP1 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs485122 chr1:67198642 SGIP1 C - 13 T vs. C 0.258 (C) 0.217 (T) >1 (-) 0 (-) >0.05
rs28878898 chr1:67228590 TCTEX1D1 C - 13 A vs. G - - <1 (-) 17 (-) >0.05
rs678253 chr1:67204107 SGIP1 C - 13 A vs. G 0.25 (A) 0.225 (G) <1 (-) 0 (-) >0.05
rs609939 chr1:67202296 SGIP1 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs609906 chr1:67202269 SGIP1 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs624277 chr1:67203130 SGIP1 C - 13 T vs. C 0.25 (C) 0.225 (T) >1 (-) 0 (-) >0.05
rs524204 chr1:67203455 SGIP1 C - 13 A vs. G 0.25 (G) 0.225 (A) >1 (-) 0 (-) >0.05
rs693956 chr1:67203574 SGIP1 C - 13 T vs. C 0.25 (T) 0.225 (C) <1 (-) 0 (-) >0.05
rs473470 chr1:67205327 SGIP1 C - 13 T vs. C 0.25 (C) 0.225 (T) >1 (-) 0 (-) >0.05
rs116612823 chr1:67244526 TCTEX1D1 [+56bp] C - 12 A vs. C 0.025 (C) - >1 (-) 17 (-) >0.05
rs150013115 chr1:67292123 WDR78 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs512691 chr1:67197944 SGIP1 C - 13 A vs. G 0.25 (G) 0.217 (A) >1 (-) 0 (-) >0.05
rs657808 chr1:67209818 SGIP1 C - 13 A vs. G 0.25 (A) 0.242 (G) <1 (-) 0 (-) >0.05
rs114168219 chr1:67235639 TCTEX1D1 C - 13 T vs. C 0.017 (C) - <1 (-) 16 (-) >0.05
rs553729 chr1:67204293 SGIP1 C - 13 A vs. G 0.25 (A) 0.225 (G) <1 (-) 0 (-) >0.05
rs114285111 chr1:67241620 TCTEX1D1 C - 13 C vs. G 0.042 (C) - >1 (-) 0 (-) >0.05
rs143470331 chr1:67270245 INSL5 [+3306bp] C - 3 A vs. G - - <1 (-) 0 (-) >0.05
rs74609208 chr1:67279881 WDR78 C - 13 A vs. C 0.058 (A) - <1 (-) 0 (-) >0.05
rs113340351 chr1:67267436 INSL5 [+497bp] C - 13 A vs. G 0.067 (A) - >1 (-) 12 (-) >0.05
rs17129449 chr1:67255176 INSL5 [-8248bp] C - 4 C vs. G - - <1 (-) 0 (-) >0.05
rs2647386 chr1:67202188 SGIP1 C - 6 T vs. C - - >1 (-) 0 (-) >0.05
rs75585417 chr1:67225846 TCTEX1D1 C - 13 T vs. C 0.017 (T) - >1 (-) 16 (-) >0.05
rs114615223 chr1:67226052 TCTEX1D1 C - 12 A vs. T 0.025 (A) - <1 (-) 16 (-) >0.05
rs487833 chr1:67201738 SGIP1 C - 13 T vs. G 0.25 (G) - >1 (-) 0 (-) >0.05
rs77865213 chr1:67198843 SGIP1 C - 8 A vs. C 0.033 (A) - <1 (-) 0 (-) >0.05
rs2454325 chr1:67186132 SGIP1 C - 13 T vs. C 0.067 (T) 0.317 (T) <1 (-) 0 (-) >0.05
rs61780944 chr1:67217830 TCTEX1D1 [-312bp] C - 11 T vs. G 0.008 (G) - <1 (-) 0 (-) >0.05
rs116771768 chr1:67170016 SGIP1 C - 3 C vs. G 0.008 (G) - <1 (-) 0 (-) >0.05
rs2454324 chr1:67246693 TCTEX1D1 [+2223bp] C - 8 A vs. G - - <1 (-) 0 (-) >0.05
rs682896 chr1:67186062 SGIP1 C - 12 T vs. C 0.233 (T) 0.192 (C) >1 (-) 0 (-) >0.05
rs17129381 chr1:67186429 SGIP1 C - 12 A vs. T 0.083 (T) 0.5 (T) <1 (-) 0 (-) >0.05
rs520717 chr1:67256885 INSL5 [-6539bp] C - 12 A vs. G 0.067 (G) - <1 (-) 16 (-) >0.05
rs76149537 chr1:67182647 SGIP1 C - 12 T vs. C 0.042 (T) - >1 (-) 23 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.