TCTEX1D1, chr1:67218142-67244470 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11208951 chr1:67188107 SGIP1 C - 13 T vs. C 0.35 (T) 0.183 (T) <1 (-) 30 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs141522885 chr1:67196306 SGIP1 C - 3 T vs. C - - <1 (-) 0 (-) >0.05
rs489300 chr1:67175840 SGIP1 C - 13 T vs. C 0.233 (C) 0.192 (T) <1 (-) 0 (-) >0.05
rs566057 chr1:67182636 SGIP1 C - 13 T vs. C 0.15 (C) 0.308 (C) <1 (-) 0 (-) >0.05
rs609707 chr1:67176983 SGIP1 C - 13 T vs. C 0.15 (C) 0.308 (C) <1 (-) 0 (-) >0.05
rs531378 chr1:67181162 SGIP1 C - 13 T vs. C 0.15 (T) 0.308 (T) >1 (-) 0 (-) >0.05
rs7532397 chr1:67292107 WDR78 C - 13 A vs. G 0.492 (G) 0.317 (G) >1 (-) 7 (-) >0.05
rs11208963 chr1:67290818 WDR78 C - 13 T vs. C 0.483 (C) 0.333 (C) >1 (-) 7 (-) >0.05
rs6588221 chr1:67287267 WDR78 C - 13 T vs. G 0.4 (G) 0.367 (G) <1 (-) 21 (-) >0.05
rs11208964 chr1:67291158 WDR78 C - 13 A vs. C - 0.342 (C) >1 (-) 7 (-) >0.05
rs587125 chr1:67176131 SGIP1 C - 13 A vs. G 0.15 (G) 0.308 (G) <1 (-) 0 (-) >0.05
rs7364609 chr1:67288673 WDR78 C - 13 T vs. G - - >1 (-) 16 (-) >0.05
rs148126937 chr1:67234091 TCTEX1D1 C - 10 A vs. G - - >1 (-) 0 (-) >0.05
rs11208962 chr1:67286110 WDR78 C - 13 T vs. C 0.425 (C) 0.333 (C) <1 (-) 13 (-) >0.05
rs55771540 chr1:67202107 SGIP1 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs12725312 chr1:67280869 WDR78 C - 13 A vs. G 0.475 (G) 0.333 (G) >1 (-) 17 (-) >0.05
rs2173397 chr1:67280351 WDR78 C - 13 A vs. G 0.283 (A) 0.258 (A) >1 (-) 14 (-) >0.05
rs1498350 chr1:67294143 WDR78 C - 13 A vs. C 0.492 (C) 0.333 (C) >1 (-) 6 (-) >0.05
rs678499 chr1:67190199 SGIP1 C - 13 A vs. G 0.15 (G) 0.3 (G) <1 (-) 0 (-) >0.05
rs77409356 chr1:67168412 SGIP1 C - 8 T vs. C - - <1 (-) 49 (-) >0.05
rs149245248 chr1:67209391 SGIP1 C - 11 T vs. G - - >1 (-) 3 (-) >0.05
rs510771 chr1:67178646 SGIP1 C - 13 A vs. C 0.15 (A) 0.308 (A) >1 (-) 0 (-) >0.05
rs72671619 chr1:67190070 SGIP1 C - 12 A vs. G 0.017 (G) - >1 (-) 0 (-) >0.05
rs482082 chr1:67288045 WDR78 C - 13 T vs. C 0.492 (C) 0.333 (C) >1 (-) 10 (-) >0.05
rs34868698 chr1:67171980 SGIP1 C - 13 T vs. G - - <1 (-) 0 (-) >0.05
rs9633417 chr1:67171412 SGIP1 C - 13 A vs. C 0.083 (A) 0.5 (A) >1 (-) 0 (-) >0.05
rs650202 chr1:67182563 SGIP1 C - 12 T vs. C 0.233 (C) 0.192 (T) <1 (-) 0 (-) >0.05
rs1498349 chr1:67294063 WDR78 C - 13 T vs. G 0.425 (G) 0.333 (G) <1 (-) 10 (-) >0.05
rs12728269 chr1:67175438 SGIP1 C - 13 A vs. G 0.083 (A) 0.5 (A) >1 (-) 0 (-) >0.05
rs140741203 chr1:67173539 SGIP1 C - 11 T vs. C - - >1 (-) 0 (-) >0.05
rs534331 chr1:67292262 WDR78 C - 13 T vs. G 0.492 (T) 0.342 (T) <1 (-) 23 (-) >0.05
rs475762 chr1:67213426 SGIP1 C - 13 A vs. G 0.15 (G) 0.3 (G) >1 (-) 11 (-) >0.05
rs665379 chr1:67212069 SGIP1 C - 13 T vs. C 0.167 (T) 0.3 (T) >1 (-) 11 (-) >0.05
rs75166138 chr1:67274832 WDR78 [-3736bp] C - 13 A vs. G 0.05 (G) - >1 (-) 1 (-) >0.05
rs12128148 chr1:67171512 SGIP1 C - 10 A vs. G - - <1 (-) 14 (-) >0.05
rs6690854 chr1:67283812 WDR78 C - 12 T vs. G 0.4 (T) 0.325 (T) >1 (-) 28 (-) >0.05
rs1853772 chr1:67173760 SGIP1 C - 12 A vs. G 0.083 (G) 0.5 (G) >1 (-) 0 (-) >0.05
rs2761193 chr1:67202161 SGIP1 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs17495916 chr1:67283439 WDR78 C - 13 T vs. C 0.492 (C) 0.342 (C) >1 (-) 12 (-) >0.05
rs79154999 chr1:67176116 SGIP1 C - 12 T vs. C 0.042 (C) - <1 (-) 33 (-) >0.05
rs56219542 chr1:67202134 SGIP1 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs141756053 chr1:67241623 TCTEX1D1 C - 7 T vs. C - - >1 (-) 0 (-) >0.05
rs77395636 chr1:67177394 SGIP1 C - 10 C vs. G 0.025 (C) - >1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.