LTB, chr6:31548302-31550299 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3130068 chr6:31590354 PRRC2A All: C 103,235 14 G vs. A 0.2 (G) 0.025 (G) 1.13 (1.08-1.18) 34 (0-65) 6.41e-08
Meta_image?name=rs3130068

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1800628 chr6:31546850 TNF [+737bp] C - 12 A vs. G 0.133 (A) - <1 (-) 0 (-) >0.05
rs148302854 chr6:31594288 PRRC2A C - 9 T vs. C - - >1 (-) 0 (-) >0.05
rs2734583 chr6:31505480 DDX39B C - 12 A vs. G 0.133 (G) 0.033 (G) >1 (-) 0 (-) >0.05
rs17207148 chr6:31555322 LST1 C - 11 T vs. C - - >1 (-) 7 (-) >0.05
rs2857698 chr6:31585084 AIF1 [+286bp] C - 12 T vs. C 0.25 (T) 0.408 (T) >1 (-) 0 (-) >0.05
rs3130631 chr6:31566168 NCR3 [+5406bp] C - 12 C vs. G 0.1 (G) 0.033 (G) >1 (-) 0 (-) >0.05
rs111874448 chr6:31512123 ATP6V1G2-DDX39B C - 12 T vs. C - - >1 (-) 17 (-) >0.05
rs62395768 chr6:31527490 NFKBIL1 [+884bp] C - 12 A vs. G - - >1 (-) 29 (-) >0.05
rs3093561 chr6:31547474 LTB [-828bp] C - 6 A vs. G - - <1 (-) 12 (-) >0.05
rs9267488 chr6:31514247 ATP6V1G2-DDX39B C - 12 A vs. G 0.117 (G) 0.033 (G) >1 (-) 0 (-) >0.05
rs6926082 chr6:31588686 PRRC2A C - 11 T vs. C - - >1 (-) 35 (-) >0.05
rs3130632 chr6:31562764 NCR3 [+2002bp] C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs2736163 chr6:31597708 PRRC2A C - 12 T vs. C 0.008 (T) 0.117 (T) >1 (-) 0 (-) >0.05
rs769177 chr6:31547611 LTB [-691bp] C - 12 T vs. C - 0.117 (T) <1 (-) 12 (-) >0.05
rs17207127 chr6:31541948 LTA C - 11 T vs. C - - <1 (-) 5 (-) >0.05
rs2736176 chr6:31587561 PRRC2A [-936bp] C - 12 C vs. G 0.258 (C) 0.392 (C) <1 (-) 0 (-) >0.05
rs62395765 chr6:31509688 DDX39B C - 12 T vs. C - - >1 (-) 29 (-) >0.05
rs62395766 chr6:31510034 DDX39B C - 12 A vs. C - - >1 (-) 28 (-) >0.05
rs2523505 chr6:31510002 DDX39B C - 12 C vs. G 0.083 (G) 0.033 (G) >1 (-) 0 (-) >0.05

Association studies for this region [+]