AIF1, chr6:31582961-31584798 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3132453 chr6:31604044 PRRC2A All: C 103,235 14 T vs. G 0.075 (T) - 1.18 (1.11-1.25) 27 (0-62) 5.84e-08
Meta_image?name=rs3132453

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3132453 chr6:31604044 PRRC2A All: C 103,235 14 T vs. G 0.075 (T) - 1.18 (1.11-1.25) 27 (0-62) 5.84e-08
rs3130068 chr6:31590354 PRRC2A All: C 103,235 14 G vs. A 0.2 (G) 0.025 (G) 1.13 (1.08-1.18) 34 (0-65) 6.41e-08
rs2395047 chr6:31611158 BAG6 All: C 103,235 14 T vs. C 0.208 (T) 0.175 (T) 1.11 (1.07-1.15) 4 (0-57) 1.25e-07
rs2242656 chr6:31614102 BAG6 All: C 103,235 14 C vs. T 0.217 (C) 0.158 (C) 1.11 (1.07-1.15) 3 (0-56) 1.38e-07
rs2857609 chr6:31577825 AIF1 [-5136bp] All: C 103,235 14 A vs. G 0.2 (A) 0.025 (A) 1.13 (1.08-1.18) 35 (0-66) 1.55e-07
rs760293 chr6:31611777 BAG6 All: C 103,235 14 T vs. C 0.208 (T) 0.15 (T) 1.12 (1.07-1.16) 29 (0-63) 1.57e-07
rs750332 chr6:31607050 BAG6 All: C 103,235 14 C vs. T 0.208 (C) 0.15 (C) 1.12 (1.07-1.16) 29 (0-63) 1.59e-07
rs2844464 chr6:31613991 BAG6 All: C 103,235 14 G vs. A - - 0.90 (0.86-0.93) 28 (0-62) 1.77e-07
rs3130625 chr6:31597915 PRRC2A All: C 103,235 14 A vs. G 0.192 (A) 0.017 (A) 1.12 (1.07-1.17) 43 (0-70) 8.40e-07
rs3115669 chr6:31619024 BAG6 All: C 103,235 14 T vs. G 0.208 (T) - 1.12 (1.07-1.17) 40 (0-68) 1.62e-06
rs2857700 chr6:31572481 AIF1 [-10480bp] All: C 103,235 14 T vs. C 0.167 (T) 0.017 (T) 1.12 (1.07-1.17) 51 (10-73) 1.75e-06
rs2857600 chr6:31582287 AIF1 [-674bp] All: C 103,235 14 T vs. C 0.2 (T) 0.0 (T) 1.11 (1.06-1.16) 40 (0-68) 1.81e-05
rs2857598 chr6:31563228 NCR3 [+2466bp] All: C 103,235 14 A vs. C 0.183 (A) 0.05 (A) 1.11 (1.06-1.16) 34 (0-65) 2.17e-05
rs17200768 chr6:31553935 LST1 C - 11 T vs. C - - >1 (-) 0 (-) <1.00e-04
rs2736177 chr6:31586094 AIF1 [+1296bp] C - 12 T vs. C 0.183 (C) 0.0 (C) <1 (-) 45 (-) <0.05
rs2077537 chr6:31606522 BAG6 [-283bp] C - 12 C vs. G - - >1 (-) 12 (-) <0.05
rs1077394 chr6:31610384 BAG6 All: C 103,235 14 C vs. T 0.425 (C) 0.358 (C) 1.06 (1.03-1.10) 4 (0-57) 4.15e-04
rs2736192 chr6:31559353 NCR3 All: C 103,235 14 G vs. A - - 0.92 (0.88-0.96) 33 (0-65) 5.43e-04
rs3130071 chr6:31594628 PRRC2A C - 11 A vs. T 0.192 (T) - <1 (-) 21 (-) <0.05
rs3130617 chr6:31627523 C6orf47 C - 12 T vs. C 0.325 (C) 0.025 (C) <1 (-) 35 (-) <0.05
rs1046080 chr6:31595882 PRRC2A C - 12 A vs. C 0.308 (C) 0.025 (C) <1 (-) 34 (-) <0.05
rs2272593 chr6:31601344 PRRC2A C - 12 T vs. C 0.308 (T) 0.025 (T) >1 (-) 32 (-) <0.05
rs3130069 chr6:31591218 PRRC2A C - 12 A vs. G - - <1 (-) 35 (-) <0.05
rs45593732 chr6:31583725 AIF1 C - 10 T vs. C 0.017 (T) - >1 (-) 0 (-) <0.05
rs35499542 chr6:31632088 GPANK1 C - 6 C vs. G - - >1 (-) 43 (-) <0.05
rs9267525 chr6:31607942 BAG6 All: C 103,235 14 C vs. T 0.017 (C) 0.058 (C) 0.90 (0.84-0.97) 0 (-) 0.003
rs2844486 chr6:31533870 LTA [-5961bp] C - 12 A vs. G - - >1 (-) 29 (-) <0.05
rs2844485 chr6:31534206 LTA [-5625bp] C - 12 A vs. G - - >1 (-) 29 (-) <0.05
rs1121800 chr6:31535074 LTA [-4757bp] C - 12 A vs. T 0.35 (A) 0.358 (A) >1 (-) 28 (-) <0.05
rs2844484 chr6:31536224 LTA [-3607bp] C - 12 A vs. G 0.358 (A) 0.392 (A) >1 (-) 29 (-) <0.05
rs2844483 chr6:31536796 LTA [-3035bp] C - 12 T vs. G 0.358 (T) 0.392 (T) >1 (-) 29 (-) <0.05
rs2239704 chr6:31540141 LTA C - 12 A vs. C 0.358 (A) 0.392 (A) >1 (-) 29 (-) <0.05
rs746868 chr6:31540429 LTA C - 12 C vs. G 0.358 (C) 0.358 (C) >1 (-) 29 (-) <0.05
rs2857597 chr6:31585000 AIF1 [+202bp] C - 11 A vs. T 0.308 (T) 0.017 (T) <1 (-) 0 (-) <0.05
rs35502919 chr6:31604355 PRRC2A C - 9 A vs. C 0.05 (A) - <1 (-) 0 (-) <0.05
rs805302 chr6:31617957 BAG6 C - 12 A vs. C 0.35 (C) 0.392 (C) >1 (-) 23 (-) <0.05
rs35012663 chr6:31596487 PRRC2A C - 11 A vs. T - - <1 (-) 0 (-) <0.05
rs34451818 chr6:31583841 AIF1 C - 10 C vs. G 0.05 (G) - >1 (-) 12 (-) <0.05
rs3130048 chr6:31613739 BAG6 C - 12 T vs. C 0.25 (C) 0.225 (C) >1 (-) 0 (-) <0.05
chr6:31535299 chr6:31535299 LTA [-4532bp] C - 10 C vs. G - - >1 (-) 0 (-) <0.05
rs9267516 chr6:31569901 NCR3 [+9139bp] C - 12 T vs. C - - <1 (-) 18 (-) <0.05
rs35700586 chr6:31598037 PRRC2A C - 11 A vs. T - - >1 (-) 0 (-) <0.05
rs71563354 chr6:31585041 AIF1 [+243bp] C - 11 C vs. G - - >1 (-) 0 (-) <0.05
rs3093664 chr6:31544642 TNF C - 12 A vs. G 0.05 (G) - >1 (-) 15 (-) <0.05
rs34571801 chr6:31581977 AIF1 [-984bp] C - 11 C vs. G - - >1 (-) 0 (-) <0.05
rs13204983 chr6:31596679 PRRC2A C - 11 T vs. C - - >1 (-) 0 (-) <0.05
rs2229094 chr6:31540556 LTA C - 12 T vs. C 0.25 (C) 0.217 (C) >1 (-) 9 (-) <0.05
rs115470510 chr6:31618511 BAG6 C - 3 A vs. G 0.033 (A) - <1 (-) 0 (-) <0.05
rs805301 chr6:31618121 BAG6 C - 12 A vs. C 0.35 (C) 0.4 (C) >1 (-) 36 (-) <0.05
rs2071590 chr6:31539768 LTA [-63bp] C - 12 A vs. G 0.367 (A) 0.267 (A) >1 (-) 0 (-) <0.05

Association studies for this region [+]